Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033224
CDS Infomation

pacid=37440553 polypeptide=PGSC0003DMP400022602 locus=PGSC0003DMG400012759 ID=PGSC0003DMT400033224.v4.03 annot-version=v4.03
Sequence

ATGAATAACAGCCAAAGTGAGAAGCCTTTGCATATGGAAACAACTTGTGGCTCTCTTCTC
TCTGAGATGCAGAGAATATGGGATGAGATGGGAGAGCTAGATATCGAAAGGGATAAGATG
CTTTTCGAGCTTCAACAAGAGTGTCTGGAGGCATATAGAAGAAAAGTGAATCAGGCAAGT
CGTTGCCGGGCTCAACTGCAGCAAACTATCGCTGACTCTGAAGCAGAAATTGCAAAGATA
TGTGCAGCACTAGGAGAACAATCATCATATGCTAGGCAGAGTTCCAGAAGTTTGAAGGAA
GAGCTTGAGGCCATTAAGCCTAAGTTAGAAGAGATGAAGAGGAGAAAAGGAGAGAGGAAG
AACCAGTTTGCGGCTGTTGTCAATCAGATACAGACTTTCTCGAAAGAGCTCTGTTTACAC
TTCCAAGAGAATGCACAAATGAGTGTAATTGATGAGAATGATTTGTCTGTCAAAAGATTA
GAAGAAATGCAGAATTATTTGCTTGCTTTGCAAAAAGAGAAGAGTGACCGCCTGAAGCTG
CTGGTTGACAACTTGACAACTATCAATTCGTTATGTGTGGTGCTTGGGGTTGATTACAAA
CAAACTATTGCTGAGGTTGATCCAACCTTAGATGATTCTCGTGTCTTGAAAAACATAAGC
AAAGATATGATCTTTAAGCTTTCTGCTATGATCCACAGATTGGAAGAGCTCAAGAAACAA
AGATTGCTTAGGCTTCAAGATCTTGCAACTACCCTGATTGAGCTGTGGAGCTTGATGGAT
ACACCACTAGAGGAGCAACAGAAATTTTATGATTTTACAAGGCACATAGCAGCTTCAGAA
AATGAAATAAATGAGCCTAATGTTTTGTCTGCCGACAGTCTTCAACATGCAGAGGCAGAA
GTGTCGAGATTGCAGGCAATGAAATCAACAAAAATGAAAGAGGTTCTTCTGAGAAAGAGG
CTGGAGTTGGAGGAAATCTGTAGGAAAGCACATTTGGTTATTGAAACACAAAATTCAGTC
GACTTTTCTGTTGAAGCTATAGAATCTGGCGCAATTGATCCTTCATATCTGCTTGAGCAA
ATCGAGGTGCAGATTTCCAAGGTTAAAGAGGAAACTTTTAGTAGGAGAGAGATTCTTGAA
AAGTTGGAGAAGTGGTTGGCTGCATGTGATGAGGAGTGTTGGTTGGAGGAATACAACAGG
GATGAAAATCGTTACCATGGTGGAAAAGGTACACACCGTAATTTGAAGCGAGCTGAGAAA
GCTCGAGTTCTTTTCAACAAAATCCCTGCTATGGTGGAGACATTGAGATTGAGAGCTAGC
GTTTGGCAGAAAGAAAGAGGACATGAATTCTTGTATGATGGTGTAGCCATTCTTTATATG
CTTGAGCAGTATTGTGTTCTAAAGCAGGAGAGGGAGCTTGAGCGTCAGAGACTGAGGGAC
CAGAAGAAGCTTCAGGGACAGTTGATGGTGGAGCAAGAAGCACTTTTTGGTTCAATACCT
AGTCCTTCAAAGAGTGCAAAGAAGAATTTTAGACCATCAATGGGAGGTTTGACCAATAAA
AGACTATCGCTTGGAGGATCAATGCTTCAAACCCCATATGCTGGTAAAGCTGCACCATCC
TCTCGACTGTCTAGTTTGTTGGAACAGCAAACTCCCCAAAGTGGCAGAAGAGATAGTTTC
TTGGCACCAAGAAAGCATCAAGGAAGCCTCTATCCCCCTTATACACCTAGAGCTGAATCA
GTGCAGACAAGAAAGGCCCTTTTAAATCCACCTAGAACTGAATCAGCACAGATAAGGAAG
GGCCCGTTAAATCCACCTAAACCTGCAACAACACAGACAAGGAAGCCTCTTTCTCCCTTA
TCGTCATTGTTATCATCAAATGTGAGCACCATCAATATTCAGAATCAGACCCTAAAGAGC
GGGATGGTCCAGGAAGCACTGTATTTGAACAAAACTCCAGTTATGACTCCAACCAAGATT
ACCTCTGCTGAACGAAGACTCGAGGAAACAGTGTCTTTGAACAAAACTCCAATTATGACT
CCAACAAAGATTGCCTCTGCTGTTGAAGGAAGTATTACCCCAAAAACATTGCCCATTCCA
ATGCCAGCAACTCCTTCCTCAGTTTCCACTGCCATGCAGACTGCAATGACCCCAGCCAGT
CGTCATGTTTCTGCGTGTGCTGATAATATCGAGTACTCATTCGAGGAGAGAAGAGCTGGT
TACGTTCCATTGTCACATGCCAAGGTCATTACCAAATGCTTGATTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400022602
PEP Infomation

pacid=37440553 transcript=PGSC0003DMT400033224 locus=PGSC0003DMG400012759 ID=PGSC0003DMT400033224.v4.03 annot-version=v4.03
Sequence

MNNSQSEKPLHMETTCGSLLSEMQRIWDEMGELDIERDKMLFELQQECLEAYRRKVNQAS
RCRAQLQQTIADSEAEIAKICAALGEQSSYARQSSRSLKEELEAIKPKLEEMKRRKGERK
NQFAAVVNQIQTFSKELCLHFQENAQMSVIDENDLSVKRLEEMQNYLLALQKEKSDRLKL
LVDNLTTINSLCVVLGVDYKQTIAEVDPTLDDSRVLKNISKDMIFKLSAMIHRLEELKKQ
RLLRLQDLATTLIELWSLMDTPLEEQQKFYDFTRHIAASENEINEPNVLSADSLQHAEAE
VSRLQAMKSTKMKEVLLRKRLELEEICRKAHLVIETQNSVDFSVEAIESGAIDPSYLLEQ
IEVQISKVKEETFSRREILEKLEKWLAACDEECWLEEYNRDENRYHGGKGTHRNLKRAEK
ARVLFNKIPAMVETLRLRASVWQKERGHEFLYDGVAILYMLEQYCVLKQERELERQRLRD
QKKLQGQLMVEQEALFGSIPSPSKSAKKNFRPSMGGLTNKRLSLGGSMLQTPYAGKAAPS
SRLSSLLEQQTPQSGRRDSFLAPRKHQGSLYPPYTPRAESVQTRKALLNPPRTESAQIRK
GPLNPPKPATTQTRKPLSPLSSLLSSNVSTINIQNQTLKSGMVQEALYLNKTPVMTPTKI
TSAERRLEETVSLNKTPIMTPTKIASAVEGSITPKTLPIPMPATPSSVSTAMQTAMTPAS
RHVSACADNIEYSFEERRAGYVPLSHAKVITKCLI*

Transcript Sequence

Transcript ID

PGSC0003DMT400033224
Transcript Infomation

pacid=37440553 locus=PGSC0003DMG400012759 ID=PGSC0003DMT400033224.v4.03 annot-version=v4.03
Sequence

ATGAATAACAGCCAAAGTGAGAAGCCTTTGCATATGGAAACAACTTGTGGCTCTCTTCTC
TCTGAGATGCAGAGAATATGGGATGAGATGGGAGAGCTAGATATCGAAAGGGATAAGATG
CTTTTCGAGCTTCAACAAGAGTGTCTGGAGGCATATAGAAGAAAAGTGAATCAGGCAAGT
CGTTGCCGGGCTCAACTGCAGCAAACTATCGCTGACTCTGAAGCAGAAATTGCAAAGATA
TGTGCAGCACTAGGAGAACAATCATCATATGCTAGGCAGAGTTCCAGAAGTTTGAAGGAA
GAGCTTGAGGCCATTAAGCCTAAGTTAGAAGAGATGAAGAGGAGAAAAGGAGAGAGGAAG
AACCAGTTTGCGGCTGTTGTCAATCAGATACAGACTTTCTCGAAAGAGCTCTGTTTACAC
TTCCAAGAGAATGCACAAATGAGTGTAATTGATGAGAATGATTTGTCTGTCAAAAGATTA
GAAGAAATGCAGAATTATTTGCTTGCTTTGCAAAAAGAGAAGAGTGACCGCCTGAAGCTG
CTGGTTGACAACTTGACAACTATCAATTCGTTATGTGTGGTGCTTGGGGTTGATTACAAA
CAAACTATTGCTGAGGTTGATCCAACCTTAGATGATTCTCGTGTCTTGAAAAACATAAGC
AAAGATATGATCTTTAAGCTTTCTGCTATGATCCACAGATTGGAAGAGCTCAAGAAACAA
AGATTGCTTAGGCTTCAAGATCTTGCAACTACCCTGATTGAGCTGTGGAGCTTGATGGAT
ACACCACTAGAGGAGCAACAGAAATTTTATGATTTTACAAGGCACATAGCAGCTTCAGAA
AATGAAATAAATGAGCCTAATGTTTTGTCTGCCGACAGTCTTCAACATGCAGAGGCAGAA
GTGTCGAGATTGCAGGCAATGAAATCAACAAAAATGAAAGAGGTTCTTCTGAGAAAGAGG
CTGGAGTTGGAGGAAATCTGTAGGAAAGCACATTTGGTTATTGAAACACAAAATTCAGTC
GACTTTTCTGTTGAAGCTATAGAATCTGGCGCAATTGATCCTTCATATCTGCTTGAGCAA
ATCGAGGTGCAGATTTCCAAGGTTAAAGAGGAAACTTTTAGTAGGAGAGAGATTCTTGAA
AAGTTGGAGAAGTGGTTGGCTGCATGTGATGAGGAGTGTTGGTTGGAGGAATACAACAGG
GATGAAAATCGTTACCATGGTGGAAAAGGTACACACCGTAATTTGAAGCGAGCTGAGAAA
GCTCGAGTTCTTTTCAACAAAATCCCTGCTATGGTGGAGACATTGAGATTGAGAGCTAGC
GTTTGGCAGAAAGAAAGAGGACATGAATTCTTGTATGATGGTGTAGCCATTCTTTATATG
CTTGAGCAGTATTGTGTTCTAAAGCAGGAGAGGGAGCTTGAGCGTCAGAGACTGAGGGAC
CAGAAGAAGCTTCAGGGACAGTTGATGGTGGAGCAAGAAGCACTTTTTGGTTCAATACCT
AGTCCTTCAAAGAGTGCAAAGAAGAATTTTAGACCATCAATGGGAGGTTTGACCAATAAA
AGACTATCGCTTGGAGGATCAATGCTTCAAACCCCATATGCTGGTAAAGCTGCACCATCC
TCTCGACTGTCTAGTTTGTTGGAACAGCAAACTCCCCAAAGTGGCAGAAGAGATAGTTTC
TTGGCACCAAGAAAGCATCAAGGAAGCCTCTATCCCCCTTATACACCTAGAGCTGAATCA
GTGCAGACAAGAAAGGCCCTTTTAAATCCACCTAGAACTGAATCAGCACAGATAAGGAAG
GGCCCGTTAAATCCACCTAAACCTGCAACAACACAGACAAGGAAGCCTCTTTCTCCCTTA
TCGTCATTGTTATCATCAAATGTGAGCACCATCAATATTCAGAATCAGACCCTAAAGAGC
GGGATGGTCCAGGAAGCACTGTATTTGAACAAAACTCCAGTTATGACTCCAACCAAGATT
ACCTCTGCTGAACGAAGACTCGAGGAAACAGTGTCTTTGAACAAAACTCCAATTATGACT
CCAACAAAGATTGCCTCTGCTGTTGAAGGAAGTATTACCCCAAAAACATTGCCCATTCCA
ATGCCAGCAACTCCTTCCTCAGTTTCCACTGCCATGCAGACTGCAATGACCCCAGCCAGT
CGTCATGTTTCTGCGTGTGCTGATAATATCGAGTACTCATTCGAGGAGAGAAGAGCTGGT
TACGTTCCATTGTCACATGCCAAGGTCATTACCAAATGCTTGATTTAG