Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033214
CDS Infomation

pacid=37436207 polypeptide=PGSC0003DMP400022592 locus=PGSC0003DMG400012752 ID=PGSC0003DMT400033214.v4.03 annot-version=v4.03
Sequence

ATGGCGAACGAAGACGATAATCCCACAACGCCATTGGCAGCGAAACTGAACTCAAACCCT
AGTAAAGACCAGTCTCCAGCTCGCTCCGAATCATGTTCTTCACTTCCCCCTAGCAACTGC
AATGGCAATAATAACTGCAAAATTAACGATGTCAATGGCATTGATAATTCACCGTTGCAG
AGAAATCCGCAAAGCCCTGAAGATTTTATACTATCGGTGGCTTCGAAAATTGCGTCTCAG
CCTTTGCAGTATTCTGATCCTGATGTTTGGGGAATGTTAACTGCTATCTCCGATAAGGCC
CGGAAGCGTCTTCAGGGGATAAACATGCTTCTCACATCTGAAGAACATTGCATTGGTCGG
ATGGTAGATAATACCCGTTTCCAGATTTTGTCTCCAGCTGTTAGTGCATATCATTGCAAG
ATCTACAGGAAAAAGGTTGTCAGCGAAGACGTAGAGCATCCCACCAACTGTTGCACTGCA
GTCTTTCTGAAAGATTCAAGTACAAATGGGACGTACCTGAATTGGGAAAAGTTGAACAAA
AGTAGCCCAGAAGCCAGACTTCGTCATGGTGATATTATCTCTATTGCGTTTGCTCCACAA
CATGAACTTGCATTTGCCTTTGTGTTTCGAGAAGTTCTCATATCTGCTTCTTCAGCTGAT
GCTGCTGTTCTGAAGAGAAAAGCAGAGGAATTTGGTTCAGAAAGCAAAAGACTCAAAGGT
ATTGGAATTGGCACTTCTGAAGGTCCCATTTCTCTGGATGACTTCCGTAGCATGCAACGG
TCAAATACGGAACTGAGGAAGCAACTCGAAAGTCATGTTGCGACTATTGATTCCTTGCGA
AGTGAAAATCGTGCTGTTGTGGACCATCATGAGAAGGAAATGAAAGAATTGAAGGAGTCA
GTTTCTCAATCATACCTTGAACAACTCAAAGAAGTACAGCAGTTATTGGAAGCCAAGGGA
AAGGAGTTAGTTGACACAAGTAGAGTATCTTCAGAGCAGAAACATGCGTTGGAAGACCTT
AATGAAAGACTTAGTGCATCTGAGCAATCATGTTTTGAGGCCAATGAGATAATACTCAGC
CAGAAATTATCAATTTCAGAACTGAAAACTTTGCTAGATGAGGAGCGTGAACAGAGGAAA
AAGGAACGTGAAAAGGCTGCTTTGGATTTGAAAACCTCTACACAGAGAGTGCAGGCCGAA
GCCCAGGATGAAATAAGAAGGCTCTCAGAATCTGCCATCAAACGAGAAAAGGAGCAGCAA
GAAATTATTAATAAGCTTCAGGAAGATGAGAAGGAAAGATGTTTACTGATGGAAACCTTG
AGATCTAAGTTGGAAGACACCAGGCAGAAATTGGTTGTTTCTGACAACAAAGTTCGTCAG
CTTGAAGCTCAACTTTATGAGGAACAATTATCTTCTGCATGTAGGAAAAAAAAAATAGAG
GAACTTGAGCATGAGAGGAACATGTTGGGCAAAGAGCTTGAGAGTGAAAAGGCAGCTCGA
GAAGAGGCATGGGCCAAGGTTTCTGCTCTTGAACTAGAGATAAGTGCTGCAATGCGGGAT
CTTGATTTTGAGAGGCGCAGACTGAAAGGTGCTAGAGAAAGAATAATGCTACGAGAAACA
CAACTTCGGGCTTTCTATTCTACTACTGAGGAGATCTCAGTTTTGTTTGCAAAGCAGCAG
GAGCAATTGAAGGCAATGCAGAGGACATTAAAAGATGAGGAAAATTATGAGAATACCTCT
GTAGATATTGACCTTAATCCATATAATGTGAATGTGAATGGATCCCTATTAAGAGAGAAA
GAAGTAGGAGATGGAAGCCACAATGTGACTAGGGCTGGCTGCAGTACTTCCAACCAGAGG
CGTGTTAGGGAATTATTTGATTTATCAAGTGATGACGCAAGTGCTACAGAGAAGCATGAT
TGCAATAACAGAAGTGAAGGGGGACAAGACACACAGGAGGTAGAATTTGCTGGAGCTCAA
TGTGTGAAGGGTGGATTTGGTTCTGAAGTTGATGGTGTGGGAACTGAGCTAATCCCTGAA
AGTGATACAGCTGGTGTAGCAGCCAATATGGAGGGTGACCTTGTTGGAACAGAACAGGTG
CAAGAAACTGAGAGCTTGGGAATCAATAGTGAAAGGAATTTAGATTTAAACAAATTCTGT
GCTTTTGCTGAGAACACAATGCAGCTGGATGGTGGAACTCTTGGGAAAGAAGCTCAGGTG
CAGAACCCTGCAATTTGTGATGAGAGTATGCCTCCTTCCCCAGCAAATAATGTCGCTGAG
GGTGATAATGTGATTGAAGATACTGAAGCTGAAGGAACCATTAGGACAGCTGATCTTTTG
GCTTCAGAGGTTGCTGGGAGTTGGGCGTGCAGTACGGCTCCTTCTGTCCATGGTGAGAAT
GATACTCCTAAGAGTAAAGACAATGATGCATGTCCTGCAACTTTACAAGATTCAGGTGCT
CAAGTGGGTGAAAGTCAATGCGCTACATCTACTTCCAAAGCTTCTTCTAGATGGGATCAA
GATCGTAAAGCACTAAGTGAGATGATTGGAATTGTTGCCCCTGATTTGAAGGAGCAATTC
AGTCATGCAGTTGGTAGTGACTGTGATCAAGGAGGAAATGAGGGAGACGCTTCTGATTCC
GCTACAGAAAGTTGCTCTGATGATGAGGATAACATAATGAATACCGAAGCTGCATCTGAT
GCAGAGACAGTTGACGGTGAAAAAGTGAATGAGGATGTAATGGACGAAGATGATGAAGCC
ACCCAAGAGGATTCTATTGGATAG

Peptide Sequence

PEP ID

PGSC0003DMP400022592
PEP Infomation

pacid=37436207 transcript=PGSC0003DMT400033214 locus=PGSC0003DMG400012752 ID=PGSC0003DMT400033214.v4.03 annot-version=v4.03
Sequence

MANEDDNPTTPLAAKLNSNPSKDQSPARSESCSSLPPSNCNGNNNCKINDVNGIDNSPLQ
RNPQSPEDFILSVASKIASQPLQYSDPDVWGMLTAISDKARKRLQGINMLLTSEEHCIGR
MVDNTRFQILSPAVSAYHCKIYRKKVVSEDVEHPTNCCTAVFLKDSSTNGTYLNWEKLNK
SSPEARLRHGDIISIAFAPQHELAFAFVFREVLISASSADAAVLKRKAEEFGSESKRLKG
IGIGTSEGPISLDDFRSMQRSNTELRKQLESHVATIDSLRSENRAVVDHHEKEMKELKES
VSQSYLEQLKEVQQLLEAKGKELVDTSRVSSEQKHALEDLNERLSASEQSCFEANEIILS
QKLSISELKTLLDEEREQRKKEREKAALDLKTSTQRVQAEAQDEIRRLSESAIKREKEQQ
EIINKLQEDEKERCLLMETLRSKLEDTRQKLVVSDNKVRQLEAQLYEEQLSSACRKKKIE
ELEHERNMLGKELESEKAAREEAWAKVSALELEISAAMRDLDFERRRLKGARERIMLRET
QLRAFYSTTEEISVLFAKQQEQLKAMQRTLKDEENYENTSVDIDLNPYNVNVNGSLLREK
EVGDGSHNVTRAGCSTSNQRRVRELFDLSSDDASATEKHDCNNRSEGGQDTQEVEFAGAQ
CVKGGFGSEVDGVGTELIPESDTAGVAANMEGDLVGTEQVQETESLGINSERNLDLNKFC
AFAENTMQLDGGTLGKEAQVQNPAICDESMPPSPANNVAEGDNVIEDTEAEGTIRTADLL
ASEVAGSWACSTAPSVHGENDTPKSKDNDACPATLQDSGAQVGESQCATSTSKASSRWDQ
DRKALSEMIGIVAPDLKEQFSHAVGSDCDQGGNEGDASDSATESCSDDEDNIMNTEAASD
AETVDGEKVNEDVMDEDDEATQEDSIG*

Transcript Sequence

Transcript ID

PGSC0003DMT400033214
Transcript Infomation

pacid=37436207 locus=PGSC0003DMG400012752 ID=PGSC0003DMT400033214.v4.03 annot-version=v4.03
Sequence

ATGGCGAACGAAGACGATAATCCCACAACGCCATTGGCAGCGAAACTGAACTCAAACCCT
AGTAAAGACCAGTCTCCAGCTCGCTCCGAATCATGTTCTTCACTTCCCCCTAGCAACTGC
AATGGCAATAATAACTGCAAAATTAACGATGTCAATGGCATTGATAATTCACCGTTGCAG
AGAAATCCGCAAAGCCCTGAAGATTTTATACTATCGGTGGCTTCGAAAATTGCGTCTCAG
CCTTTGCAGTATTCTGATCCTGATGTTTGGGGAATGTTAACTGCTATCTCCGATAAGGCC
CGGAAGCGTCTTCAGGGGATAAACATGCTTCTCACATCTGAAGAACATTGCATTGGTCGG
ATGGTAGATAATACCCGTTTCCAGATTTTGTCTCCAGCTGTTAGTGCATATCATTGCAAG
ATCTACAGGAAAAAGGTTGTCAGCGAAGACGTAGAGCATCCCACCAACTGTTGCACTGCA
GTCTTTCTGAAAGATTCAAGTACAAATGGGACGTACCTGAATTGGGAAAAGTTGAACAAA
AGTAGCCCAGAAGCCAGACTTCGTCATGGTGATATTATCTCTATTGCGTTTGCTCCACAA
CATGAACTTGCATTTGCCTTTGTGTTTCGAGAAGTTCTCATATCTGCTTCTTCAGCTGAT
GCTGCTGTTCTGAAGAGAAAAGCAGAGGAATTTGGTTCAGAAAGCAAAAGACTCAAAGGT
ATTGGAATTGGCACTTCTGAAGGTCCCATTTCTCTGGATGACTTCCGTAGCATGCAACGG
TCAAATACGGAACTGAGGAAGCAACTCGAAAGTCATGTTGCGACTATTGATTCCTTGCGA
AGTGAAAATCGTGCTGTTGTGGACCATCATGAGAAGGAAATGAAAGAATTGAAGGAGTCA
GTTTCTCAATCATACCTTGAACAACTCAAAGAAGTACAGCAGTTATTGGAAGCCAAGGGA
AAGGAGTTAGTTGACACAAGTAGAGTATCTTCAGAGCAGAAACATGCGTTGGAAGACCTT
AATGAAAGACTTAGTGCATCTGAGCAATCATGTTTTGAGGCCAATGAGATAATACTCAGC
CAGAAATTATCAATTTCAGAACTGAAAACTTTGCTAGATGAGGAGCGTGAACAGAGGAAA
AAGGAACGTGAAAAGGCTGCTTTGGATTTGAAAACCTCTACACAGAGAGTGCAGGCCGAA
GCCCAGGATGAAATAAGAAGGCTCTCAGAATCTGCCATCAAACGAGAAAAGGAGCAGCAA
GAAATTATTAATAAGCTTCAGGAAGATGAGAAGGAAAGATGTTTACTGATGGAAACCTTG
AGATCTAAGTTGGAAGACACCAGGCAGAAATTGGTTGTTTCTGACAACAAAGTTCGTCAG
CTTGAAGCTCAACTTTATGAGGAACAATTATCTTCTGCATGTAGGAAAAAAAAAATAGAG
GAACTTGAGCATGAGAGGAACATGTTGGGCAAAGAGCTTGAGAGTGAAAAGGCAGCTCGA
GAAGAGGCATGGGCCAAGGTTTCTGCTCTTGAACTAGAGATAAGTGCTGCAATGCGGGAT
CTTGATTTTGAGAGGCGCAGACTGAAAGGTGCTAGAGAAAGAATAATGCTACGAGAAACA
CAACTTCGGGCTTTCTATTCTACTACTGAGGAGATCTCAGTTTTGTTTGCAAAGCAGCAG
GAGCAATTGAAGGCAATGCAGAGGACATTAAAAGATGAGGAAAATTATGAGAATACCTCT
GTAGATATTGACCTTAATCCATATAATGTGAATGTGAATGGATCCCTATTAAGAGAGAAA
GAAGTAGGAGATGGAAGCCACAATGTGACTAGGGCTGGCTGCAGTACTTCCAACCAGAGG
CGTGTTAGGGAATTATTTGATTTATCAAGTGATGACGCAAGTGCTACAGAGAAGCATGAT
TGCAATAACAGAAGTGAAGGGGGACAAGACACACAGGAGGTAGAATTTGCTGGAGCTCAA
TGTGTGAAGGGTGGATTTGGTTCTGAAGTTGATGGTGTGGGAACTGAGCTAATCCCTGAA
AGTGATACAGCTGGTGTAGCAGCCAATATGGAGGGTGACCTTGTTGGAACAGAACAGGTG
CAAGAAACTGAGAGCTTGGGAATCAATAGTGAAAGGAATTTAGATTTAAACAAATTCTGT
GCTTTTGCTGAGAACACAATGCAGCTGGATGGTGGAACTCTTGGGAAAGAAGCTCAGGTG
CAGAACCCTGCAATTTGTGATGAGAGTATGCCTCCTTCCCCAGCAAATAATGTCGCTGAG
GGTGATAATGTGATTGAAGATACTGAAGCTGAAGGAACCATTAGGACAGCTGATCTTTTG
GCTTCAGAGGTTGCTGGGAGTTGGGCGTGCAGTACGGCTCCTTCTGTCCATGGTGAGAAT
GATACTCCTAAGAGTAAAGACAATGATGCATGTCCTGCAACTTTACAAGATTCAGGTGCT
CAAGTGGGTGAAAGTCAATGCGCTACATCTACTTCCAAAGCTTCTTCTAGATGGGATCAA
GATCGTAAAGCACTAAGTGAGATGATTGGAATTGTTGCCCCTGATTTGAAGGAGCAATTC
AGTCATGCAGTTGGTAGTGACTGTGATCAAGGAGGAAATGAGGGAGACGCTTCTGATTCC
GCTACAGAAAGTTGCTCTGATGATGAGGATAACATAATGAATACCGAAGCTGCATCTGAT
GCAGAGACAGTTGACGGTGAAAAAGTGAATGAGGATGTAATGGACGAAGATGATGAAGCC
ACCCAAGAGGATTCTATTGGATAG