Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033203
CDS Infomation

pacid=37437353 polypeptide=PGSC0003DMP400022583 locus=PGSC0003DMG401012750 ID=PGSC0003DMT400033203.v4.03 annot-version=v4.03
Sequence

ATGGAGATGGAGGCTCCTCCTTCTACCGCCGCCGCCACTGCCACCACACACAACCGCCGC
CATCAATTGAAGCAACAAATCGACGAAAAAAAGCACCGTTCCATCTTCGAATTACCAGCG
AATTTCTTCGATTCCTGCCGCCTCCTCCAATCTCCGTCAGCTTCCCCACTCTCCATAGTC
GAACCACTCGAAAGTCTCTCAGTCAAAACCCTAGACGACGTAGACATTGATGACGAATCC
AAAAAGGAAGTGGAGAATACGGAGAGTTCGAGTAGTACGAAAAACGCCAAACAAAGGTGG
TCTTGCAATACTTGTAAGGCTGAGTTTGAGTCTCTCCATGACCAGCGTTCACACTTCAAA
TCCGATATACATCGACTAAATATAAAGCTAAGCATTTCTGGGAGAGACACTATAAAGGAA
GAAGACTTTGATGAGATGACCTCTGATTCCCTCTGTAAGGATTATGATTTATCAAGTATT
TCTGGATCAGATGTAGAAGATGAGAAAATATCTGGTCAGTCCAATGATTTGCAGCAAAGA
ATAGTTGGAGATATCAAGAACAAAATATTTTTAAAATTGCATAATGGGGAGATCCTTTCA
CTATGGAAGGGTTTACTCCTGAATGAGTCAGAGAGCATTTTGTTTGAGAACAAGAAGGCG
CTTGCTGCAGATGATATCAGGAATAGGATTTGTTTGACAGAAAATGAAGTGACTAAGAAG
TTGAAATATCTGATCCATGAACCAAGGGATAATACCCGTTTGAGGATTGTGTTGCTTGCA
AGAGGTGGGCATTTTGCAGGCTGTGTTTTTGATGGTACCACAGCTGTGGCACATAAGACA
TTCCACAGATATGTTATACGGGCCAAGGCCGGTAAGAAACAATCATCAAAAGATGCAAGT
GGCAAGATGGCGCACTCTGCTGGAGCATCAATTCGTCGGTATAATGAACTTGCTCTTAAA
AAGGAAATCCAAGAGTTGTTCACAGCATGGAAGCCTTACTTTGCTGATTCGTCCTGTATC
TTCATCCATGCTCCCTCTAACAACAGGCAACTATTTTTTGATGGAGATCGACCATATTTC
GGTTGTCAGCTTAATGTTATTAGAAATATTCCTTTGACTGTTCGAAGACCTACCTACAAG
GAAGCTCGACGAATATATGGCTTACTGACTCAAGTATCCTTTGAAGTAAATGAGGAAATT
GCACCTGCTTGTGAAGAGGTGTCACTATTAAGTGCAAGTGGTCTGAGCAGCAAGTGTAAT
GAGTCCATGGAGGTTTTGAAGGAAAATTTGGAGACTAAGGAAGTCACAAAAGCATCTTCT
AGTGTTATGCCATCACCCAATGAGATCATATCAAGTGATTGTGATAGTGATAATGACACT
ATTGGTACATCCACTCCTTTACATGAAGCAGCAAAGTGTGGGGATTCTGAAAAGGTTTTT
GACCTTCTAGAACAAGGAATGGATCCTTGCCTCAAAGACGAGAGGGGGAGAACTCCATAT
ATGGTTGCAACTGAAAAAGAAGTGAGAAACACATTTAGACGCTTCATGGCATCAAACCTT
GACAAGTGGGATTGGAATGCTGCTAAGTTGCCTAGCGCATTGACTAAAGAAATGGAGGAA
ACACAAGCTGCTAAACAGGCAGAGAAAGACGCCAAGAAGAAAGCTAGGGCAAAAGAGTTG
AAAAAATTGCGGAAAGCAAGGCAGAAGGCTCAGGCTGAGGCTGCTCAAGTCCAGACTGCT
CCATCTAACTCAGAGAGAGGAACGGTTGCTGCTTCAGCTCTTAAAGGAAAATCACAATCT
AGTCTTTCAGCAAGATTATCAAAAGAGGAGGAATCGAAAAGGGCTCATGATGCTGAAAGG
GAAAAAAGAGCAACTGCAGCTGAGAGAAGATTAGCTGCTGCTGCAGCCCTGAAAGCTCAA
GGCACGGACTTAGTTTCTGCTCCAGGTGGCTCGGGTACTGACATTCTCTGCTCTTGCTGT
AGCGGGTCATTGGCTGGCAAGGTTCCCTTTCACAGATATAATTACAAGTATTGCAGCAGT
GCATGCATGCACGTGCATAAAGAGATCCTTGAGGACGGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400022583
PEP Infomation

pacid=37437353 transcript=PGSC0003DMT400033203 locus=PGSC0003DMG401012750 ID=PGSC0003DMT400033203.v4.03 annot-version=v4.03
Sequence

MEMEAPPSTAAATATTHNRRHQLKQQIDEKKHRSIFELPANFFDSCRLLQSPSASPLSIV
EPLESLSVKTLDDVDIDDESKKEVENTESSSSTKNAKQRWSCNTCKAEFESLHDQRSHFK
SDIHRLNIKLSISGRDTIKEEDFDEMTSDSLCKDYDLSSISGSDVEDEKISGQSNDLQQR
IVGDIKNKIFLKLHNGEILSLWKGLLLNESESILFENKKALAADDIRNRICLTENEVTKK
LKYLIHEPRDNTRLRIVLLARGGHFAGCVFDGTTAVAHKTFHRYVIRAKAGKKQSSKDAS
GKMAHSAGASIRRYNELALKKEIQELFTAWKPYFADSSCIFIHAPSNNRQLFFDGDRPYF
GCQLNVIRNIPLTVRRPTYKEARRIYGLLTQVSFEVNEEIAPACEEVSLLSASGLSSKCN
ESMEVLKENLETKEVTKASSSVMPSPNEIISSDCDSDNDTIGTSTPLHEAAKCGDSEKVF
DLLEQGMDPCLKDERGRTPYMVATEKEVRNTFRRFMASNLDKWDWNAAKLPSALTKEMEE
TQAAKQAEKDAKKKARAKELKKLRKARQKAQAEAAQVQTAPSNSERGTVAASALKGKSQS
SLSARLSKEEESKRAHDAEREKRATAAERRLAAAAALKAQGTDLVSAPGGSGTDILCSCC
SGSLAGKVPFHRYNYKYCSSACMHVHKEILEDG*

Transcript Sequence

Transcript ID

PGSC0003DMT400033203
Transcript Infomation

pacid=37437353 locus=PGSC0003DMG401012750 ID=PGSC0003DMT400033203.v4.03 annot-version=v4.03
Sequence

ATGGAGATGGAGGCTCCTCCTTCTACCGCCGCCGCCACTGCCACCACACACAACCGCCGC
CATCAATTGAAGCAACAAATCGACGAAAAAAAGCACCGTTCCATCTTCGAATTACCAGCG
AATTTCTTCGATTCCTGCCGCCTCCTCCAATCTCCGTCAGCTTCCCCACTCTCCATAGTC
GAACCACTCGAAAGTCTCTCAGTCAAAACCCTAGACGACGTAGACATTGATGACGAATCC
AAAAAGGAAGTGGAGAATACGGAGAGTTCGAGTAGTACGAAAAACGCCAAACAAAGGTGG
TCTTGCAATACTTGTAAGGCTGAGTTTGAGTCTCTCCATGACCAGCGTTCACACTTCAAA
TCCGATATACATCGACTAAATATAAAGCTAAGCATTTCTGGGAGAGACACTATAAAGGAA
GAAGACTTTGATGAGATGACCTCTGATTCCCTCTGTAAGGATTATGATTTATCAAGTATT
TCTGGATCAGATGTAGAAGATGAGAAAATATCTGGTCAGTCCAATGATTTGCAGCAAAGA
ATAGTTGGAGATATCAAGAACAAAATATTTTTAAAATTGCATAATGGGGAGATCCTTTCA
CTATGGAAGGGTTTACTCCTGAATGAGTCAGAGAGCATTTTGTTTGAGAACAAGAAGGCG
CTTGCTGCAGATGATATCAGGAATAGGATTTGTTTGACAGAAAATGAAGTGACTAAGAAG
TTGAAATATCTGATCCATGAACCAAGGGATAATACCCGTTTGAGGATTGTGTTGCTTGCA
AGAGGTGGGCATTTTGCAGGCTGTGTTTTTGATGGTACCACAGCTGTGGCACATAAGACA
TTCCACAGATATGTTATACGGGCCAAGGCCGGTAAGAAACAATCATCAAAAGATGCAAGT
GGCAAGATGGCGCACTCTGCTGGAGCATCAATTCGTCGGTATAATGAACTTGCTCTTAAA
AAGGAAATCCAAGAGTTGTTCACAGCATGGAAGCCTTACTTTGCTGATTCGTCCTGTATC
TTCATCCATGCTCCCTCTAACAACAGGCAACTATTTTTTGATGGAGATCGACCATATTTC
GGTTGTCAGCTTAATGTTATTAGAAATATTCCTTTGACTGTTCGAAGACCTACCTACAAG
GAAGCTCGACGAATATATGGCTTACTGACTCAAGTATCCTTTGAAGTAAATGAGGAAATT
GCACCTGCTTGTGAAGAGGTGTCACTATTAAGTGCAAGTGGTCTGAGCAGCAAGTGTAAT
GAGTCCATGGAGGTTTTGAAGGAAAATTTGGAGACTAAGGAAGTCACAAAAGCATCTTCT
AGTGTTATGCCATCACCCAATGAGATCATATCAAGTGATTGTGATAGTGATAATGACACT
ATTGGTACATCCACTCCTTTACATGAAGCAGCAAAGTGTGGGGATTCTGAAAAGGTTTTT
GACCTTCTAGAACAAGGAATGGATCCTTGCCTCAAAGACGAGAGGGGGAGAACTCCATAT
ATGGTTGCAACTGAAAAAGAAGTGAGAAACACATTTAGACGCTTCATGGCATCAAACCTT
GACAAGTGGGATTGGAATGCTGCTAAGTTGCCTAGCGCATTGACTAAAGAAATGGAGGAA
ACACAAGCTGCTAAACAGGCAGAGAAAGACGCCAAGAAGAAAGCTAGGGCAAAAGAGTTG
AAAAAATTGCGGAAAGCAAGGCAGAAGGCTCAGGCTGAGGCTGCTCAAGTCCAGACTGCT
CCATCTAACTCAGAGAGAGGAACGGTTGCTGCTTCAGCTCTTAAAGGAAAATCACAATCT
AGTCTTTCAGCAAGATTATCAAAAGAGGAGGAATCGAAAAGGGCTCATGATGCTGAAAGG
GAAAAAAGAGCAACTGCAGCTGAGAGAAGATTAGCTGCTGCTGCAGCCCTGAAAGCTCAA
GGCACGGACTTAGTTTCTGCTCCAGGTGGCTCGGGTACTGACATTCTCTGCTCTTGCTGT
AGCGGGTCATTGGCTGGCAAGGTTCCCTTTCACAGATATAATTACAAGTATTGCAGCAGT
GCATGCATGCACGTGCATAAAGAGATCCTTGAGGACGGATAA