Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033132
CDS Infomation

pacid=37476003 polypeptide=PGSC0003DMP400022538 locus=PGSC0003DMG400012721 ID=PGSC0003DMT400033132.v4.03 annot-version=v4.03
Sequence

ATGATGATGTCTACCGTCTTCTTAATCTCTCTGTTTCTCCGATTAATCCTGACCGTCCAT
TCACACAATTCACCACTAGATGAACGTGAAATTCGCCGGAAACTCTCCCTCCATACGCCG
CAGCCGTCGCAGTCGCCGGAAAATAGTACTACTCTACACCTCCGACCGTCCGGTTCATCG
TTCAAAATTGCACTTTTCGCCGACTTGCATTTCGGAGAAAACGCATGGACTGACTGGGGC
CCACGCCAAGACGTAAACTCCATTAAAGTTATGTCTACTGTGCTCGATGAAGAACAACCA
GACTTCGTAGTTTATCTTGGTGATGTCATTACAACCAACAACATACCGATACAAAATGCA
AGTTTATATTGGGATCAAGCAATCTCTCCGACCAGAGACAGGGGAATTCCATGGGCTAGC
GTGTTTGGAAACCATGACGATATGCCATTTGAGTGGCCAATGGATTGGTTTTCATCCACC
GGAATTCCCCCTTTTCGTTGTCCAATGAATGCTTCCTGTCCTAGTGAGTCTGAAGGAGGC
AAAGGTTGCAACTTCAAGGGCACTACGCGTTTGGAGCTGATGACGAATGAACTAGAGATG
AATAAATTATCTTACTCGAAATTCGGTCGTAAAGACTTATGGCCAAGTGTTTCCAACTAT
GTCCTTAAACTTTCACCTACGGATGACCCTGAATCAGTCATAGCATACATGTATTTCTTA
GATTCTGGTGGTGGTTCATACCCTGAGGTAATATCAAATGCCCAAGCGGAATGGTTCAAC
CGCACATCTCAAGAGATCAATCCTAACTCAAGGGTACCGGAGATAATTTTTTGGCATATA
CCAAGCCAAGCTTATAAGACGGTTGCTCCAAGGTTTTATGCACACAGGAAGTGTATTGGC
TCAATGTTTGTGGAGAAAGTCGCTTCTCAAGAAGCTGAAATGGGGATGATGAAGCTTCTT
GAAGGAAGATCTTCTGTGAAGGTAAAGGACTGCAGAGCTCAGTTTTCCATTTTCAATATT
TTACCTGCCACAATCATTAGTGGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400022538
PEP Infomation

pacid=37476003 transcript=PGSC0003DMT400033132 locus=PGSC0003DMG400012721 ID=PGSC0003DMT400033132.v4.03 annot-version=v4.03
Sequence

MMMSTVFLISLFLRLILTVHSHNSPLDEREIRRKLSLHTPQPSQSPENSTTLHLRPSGSS
FKIALFADLHFGENAWTDWGPRQDVNSIKVMSTVLDEEQPDFVVYLGDVITTNNIPIQNA
SLYWDQAISPTRDRGIPWASVFGNHDDMPFEWPMDWFSSTGIPPFRCPMNASCPSESEGG
KGCNFKGTTRLELMTNELEMNKLSYSKFGRKDLWPSVSNYVLKLSPTDDPESVIAYMYFL
DSGGGSYPEVISNAQAEWFNRTSQEINPNSRVPEIIFWHIPSQAYKTVAPRFYAHRKCIG
SMFVEKVASQEAEMGMMKLLEGRSSVKVKDCRAQFSIFNILPATIISG*

Transcript Sequence

Transcript ID

PGSC0003DMT400033132
Transcript Infomation

pacid=37476003 locus=PGSC0003DMG400012721 ID=PGSC0003DMT400033132.v4.03 annot-version=v4.03
Sequence

ATGATGATGTCTACCGTCTTCTTAATCTCTCTGTTTCTCCGATTAATCCTGACCGTCCAT
TCACACAATTCACCACTAGATGAACGTGAAATTCGCCGGAAACTCTCCCTCCATACGCCG
CAGCCGTCGCAGTCGCCGGAAAATAGTACTACTCTACACCTCCGACCGTCCGGTTCATCG
TTCAAAATTGCACTTTTCGCCGACTTGCATTTCGGAGAAAACGCATGGACTGACTGGGGC
CCACGCCAAGACGTAAACTCCATTAAAGTTATGTCTACTGTGCTCGATGAAGAACAACCA
GACTTCGTAGTTTATCTTGGTGATGTCATTACAACCAACAACATACCGATACAAAATGCA
AGTTTATATTGGGATCAAGCAATCTCTCCGACCAGAGACAGGGGAATTCCATGGGCTAGC
GTGTTTGGAAACCATGACGATATGCCATTTGAGTGGCCAATGGATTGGTTTTCATCCACC
GGAATTCCCCCTTTTCGTTGTCCAATGAATGCTTCCTGTCCTAGTGAGTCTGAAGGAGGC
AAAGGTTGCAACTTCAAGGGCACTACGCGTTTGGAGCTGATGACGAATGAACTAGAGATG
AATAAATTATCTTACTCGAAATTCGGTCGTAAAGACTTATGGCCAAGTGTTTCCAACTAT
GTCCTTAAACTTTCACCTACGGATGACCCTGAATCAGTCATAGCATACATGTATTTCTTA
GATTCTGGTGGTGGTTCATACCCTGAGGTAATATCAAATGCCCAAGCGGAATGGTTCAAC
CGCACATCTCAAGAGATCAATCCTAACTCAAGGGTACCGGAGATAATTTTTTGGCATATA
CCAAGCCAAGCTTATAAGACGGTTGCTCCAAGGTTTTATGCACACAGGAAGTGTATTGGC
TCAATGTTTGTGGAGAAAGTCGCTTCTCAAGAAGCTGAAATGGGGATGATGAAGCTTCTT
GAAGGAAGATCTTCTGTGAAGGTAAAGGACTGCAGAGCTCAGTTTTCCATTTTCAATATT
TTACCTGCCACAATCATTAGTGGCTGA