Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033117
CDS Infomation

pacid=37473354 polypeptide=PGSC0003DMP400022527 locus=PGSC0003DMG400012715 ID=PGSC0003DMT400033117.v4.03 annot-version=v4.03
Sequence

ATGTCCGATTACCCTCACAATCCCTCCGGCTATGGTTACGGCTACCAACCACCACAATCT
CAACCGTACTCCTCCGCTCCATATGGCGGTTCAGCTCCAGTACCCTACGGTGCTCCACCA
CCACAACAAGTCCACAGCTCACCCTACGGTGACCTAAATAAACCTCCGAAGGACAATACC
CCATCTTCCGGCGGTTACCCAGGTCCTTACGGATCGAATCCGTTTTCGTCACTGATGCCG
TCGATTTTTCCACCCGGAACCGACCCGAATGTGATGTCTTGCTTTCAAATGGCGGATCAG
GATGGTAGTGGGTTTATTGATGATAAGGAATTGCAGAAGGCACTTTCTTCGTATAATCAA
AGCTTTGGATTGAGAACTGTTCATCTTCTTATGTATCTCTTCACCAATACCAATATCAGA
AAAATCGGTCCTAAAGAATTCACTGCAGTCTTCTCTAGTCTTCAAAACTGGAGGGCAATT
TTTGAAAGATTTGACAAGGATAGGAGTGGAAAAATTGATTCCTCTGAATTAAGAGAGGCC
TTACATAGCCTGGGATATGCTGTATATGGTCCTGTTTTGGAGTTGCTGGTTTCCAAGTTT
GACAAAACTGGTGGAATGATTAAGGCCATTGAATATGATAACTTCATTGAGTGCTGCCTC
ACTGTCAAGGGACTGACAGAGAAATTCAAGGAGAAGGATATTGCATACTCTGGCTCAGCA
ACATTCACTTATGATTCCTTCATGCTGACTATTTTGCCTTTCCTCATTGCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400022527
PEP Infomation

pacid=37473354 transcript=PGSC0003DMT400033117 locus=PGSC0003DMG400012715 ID=PGSC0003DMT400033117.v4.03 annot-version=v4.03
Sequence

MSDYPHNPSGYGYGYQPPQSQPYSSAPYGGSAPVPYGAPPPQQVHSSPYGDLNKPPKDNT
PSSGGYPGPYGSNPFSSLMPSIFPPGTDPNVMSCFQMADQDGSGFIDDKELQKALSSYNQ
SFGLRTVHLLMYLFTNTNIRKIGPKEFTAVFSSLQNWRAIFERFDKDRSGKIDSSELREA
LHSLGYAVYGPVLELLVSKFDKTGGMIKAIEYDNFIECCLTVKGLTEKFKEKDIAYSGSA
TFTYDSFMLTILPFLIA*

Transcript Sequence

Transcript ID

PGSC0003DMT400033117
Transcript Infomation

pacid=37473354 locus=PGSC0003DMG400012715 ID=PGSC0003DMT400033117.v4.03 annot-version=v4.03
Sequence

ATGTCCGATTACCCTCACAATCCCTCCGGCTATGGTTACGGCTACCAACCACCACAATCT
CAACCGTACTCCTCCGCTCCATATGGCGGTTCAGCTCCAGTACCCTACGGTGCTCCACCA
CCACAACAAGTCCACAGCTCACCCTACGGTGACCTAAATAAACCTCCGAAGGACAATACC
CCATCTTCCGGCGGTTACCCAGGTCCTTACGGATCGAATCCGTTTTCGTCACTGATGCCG
TCGATTTTTCCACCCGGAACCGACCCGAATGTGATGTCTTGCTTTCAAATGGCGGATCAG
GATGGTAGTGGGTTTATTGATGATAAGGAATTGCAGAAGGCACTTTCTTCGTATAATCAA
AGCTTTGGATTGAGAACTGTTCATCTTCTTATGTATCTCTTCACCAATACCAATATCAGA
AAAATCGGTCCTAAAGAATTCACTGCAGTCTTCTCTAGTCTTCAAAACTGGAGGGCAATT
TTTGAAAGATTTGACAAGGATAGGAGTGGAAAAATTGATTCCTCTGAATTAAGAGAGGCC
TTACATAGCCTGGGATATGCTGTATATGGTCCTGTTTTGGAGTTGCTGGTTTCCAAGTTT
GACAAAACTGGTGGAATGATTAAGGCCATTGAATATGATAACTTCATTGAGTGCTGCCTC
ACTGTCAAGGGACTGACAGAGAAATTCAAGGAGAAGGATATTGCATACTCTGGCTCAGCA
ACATTCACTTATGATTCCTTCATGCTGACTATTTTGCCTTTCCTCATTGCTTAG