Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033084
CDS Infomation

pacid=37474275 polypeptide=PGSC0003DMP400022512 locus=PGSC0003DMG400012704 ID=PGSC0003DMT400033084.v4.03 annot-version=v4.03
Sequence

ATGATATCATCCTCAGAGACTAACTGGTTACATTGTATCATTGATATACCTGTGTCGACG
TTAGGTGCAACACCACATGAAGAGTCGACACAGAAAATACATTTTGGTATTCCACATAAA
CTTGCCGAGAGTACTAGTAAGGAAGATTATCACAAGTACTACGAGCCCCGTGTGGTTTCC
CTTGGTCCATTCCACTATGGAAAACCTCATGTTGAACCCATGGAGAATTTCAAGCGGAAA
GCAGTGAGGGAATTGTTACTTGAATCCTTGAACCAGGATTGCTCATCAGACGAGGAGCTG
GCATCCCTTGAAAAAGTGTATAAAAGTGTTGAACATGACTTGCTCAGTGCTCGAGATCTT
TATGACATGTCTCGTAGGGATACAATTTCAGACAGTGAGTGGTGTCAGATGATGTTCCGC
GATGCCTGCTTTATTATTTACTTCATCACTAGTACTGGCAAGAGGAGCTGGTTGAAGAAA
CGTAATAGAGATTTGGTGTGGCGTGACATTATATTGCTTGAAAATCAATTTCCTCTCCAG
GTTCTAAGCGCGTTAGTACGCGCATTCAAATGTGAAGAGTCTCTTTTCCGGGTTCCAACT
CCTCCTATAGTTGATAATTATATCTACATCTACAAATTTTCCTTTCTTCATCCACATCGG
GCCCCAGATTCTGTACATCTTCTTCAATATTATAGAAACTTGTGGATCAATGTTTTATTT
AACATTGATGTCGAAGAAGAAGAAGAAGATGACAACAAAAAAGAAGAAGATGGTCCACCT
TTCTCAGTCACAGAGTTGAAGAAAGTAGGTATTCGTTGCAGCTGTGCGATATCGCAGAAT
GACAAAGTCATCCATTTTAAATCATCTATGTTATCGGGGAAGTTATTCCTTCCACAACTA
ATTATCGACGAATTGAATATGACCCTTTTATATAATCTAGTTGCGTATGAATCTTCGTGC
AGCTTAGAATATACATCCTTTGGATTCTCATCTTACTTGAATTTCATGAGTATGTTAATT
AATGGAGAGGAAGATGTTAAGGAGCTGCGAGCCAGGGAAGTAATCCAGATCAACCTCAAA
TTTAGCGATGAACAAGTGGTTAACTTCTTTAAAGATATAGTTGCACATCATGATCCCAAT
CCTCAAGGTTTTAAGGATGTCAAACAACAGATTTCTACTTACTTCAAAAGTAAAAATCTT
CTCCCTCTACGAGTTGGTTATGCTGAATTTAAGCAAAGGTACTTTAGTGGTCCATGGAGT
TTCCTTGTGTTCCTTGCTGTTATTTTCACGGTTAGTATGACTGTAATTCAGACCGTCTTC
ACAGGCATTCAGACATACAAAAAAGACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400022512
PEP Infomation

pacid=37474275 transcript=PGSC0003DMT400033084 locus=PGSC0003DMG400012704 ID=PGSC0003DMT400033084.v4.03 annot-version=v4.03
Sequence

MISSSETNWLHCIIDIPVSTLGATPHEESTQKIHFGIPHKLAESTSKEDYHKYYEPRVVS
LGPFHYGKPHVEPMENFKRKAVRELLLESLNQDCSSDEELASLEKVYKSVEHDLLSARDL
YDMSRRDTISDSEWCQMMFRDACFIIYFITSTGKRSWLKKRNRDLVWRDIILLENQFPLQ
VLSALVRAFKCEESLFRVPTPPIVDNYIYIYKFSFLHPHRAPDSVHLLQYYRNLWINVLF
NIDVEEEEEDDNKKEEDGPPFSVTELKKVGIRCSCAISQNDKVIHFKSSMLSGKLFLPQL
IIDELNMTLLYNLVAYESSCSLEYTSFGFSSYLNFMSMLINGEEDVKELRAREVIQINLK
FSDEQVVNFFKDIVAHHDPNPQGFKDVKQQISTYFKSKNLLPLRVGYAEFKQRYFSGPWS
FLVFLAVIFTVSMTVIQTVFTGIQTYKKD*

Transcript Sequence

Transcript ID

PGSC0003DMT400033084
Transcript Infomation

pacid=37474275 locus=PGSC0003DMG400012704 ID=PGSC0003DMT400033084.v4.03 annot-version=v4.03
Sequence

ATGATATCATCCTCAGAGACTAACTGGTTACATTGTATCATTGATATACCTGTGTCGACG
TTAGGTGCAACACCACATGAAGAGTCGACACAGAAAATACATTTTGGTATTCCACATAAA
CTTGCCGAGAGTACTAGTAAGGAAGATTATCACAAGTACTACGAGCCCCGTGTGGTTTCC
CTTGGTCCATTCCACTATGGAAAACCTCATGTTGAACCCATGGAGAATTTCAAGCGGAAA
GCAGTGAGGGAATTGTTACTTGAATCCTTGAACCAGGATTGCTCATCAGACGAGGAGCTG
GCATCCCTTGAAAAAGTGTATAAAAGTGTTGAACATGACTTGCTCAGTGCTCGAGATCTT
TATGACATGTCTCGTAGGGATACAATTTCAGACAGTGAGTGGTGTCAGATGATGTTCCGC
GATGCCTGCTTTATTATTTACTTCATCACTAGTACTGGCAAGAGGAGCTGGTTGAAGAAA
CGTAATAGAGATTTGGTGTGGCGTGACATTATATTGCTTGAAAATCAATTTCCTCTCCAG
GTTCTAAGCGCGTTAGTACGCGCATTCAAATGTGAAGAGTCTCTTTTCCGGGTTCCAACT
CCTCCTATAGTTGATAATTATATCTACATCTACAAATTTTCCTTTCTTCATCCACATCGG
GCCCCAGATTCTGTACATCTTCTTCAATATTATAGAAACTTGTGGATCAATGTTTTATTT
AACATTGATGTCGAAGAAGAAGAAGAAGATGACAACAAAAAAGAAGAAGATGGTCCACCT
TTCTCAGTCACAGAGTTGAAGAAAGTAGGTATTCGTTGCAGCTGTGCGATATCGCAGAAT
GACAAAGTCATCCATTTTAAATCATCTATGTTATCGGGGAAGTTATTCCTTCCACAACTA
ATTATCGACGAATTGAATATGACCCTTTTATATAATCTAGTTGCGTATGAATCTTCGTGC
AGCTTAGAATATACATCCTTTGGATTCTCATCTTACTTGAATTTCATGAGTATGTTAATT
AATGGAGAGGAAGATGTTAAGGAGCTGCGAGCCAGGGAAGTAATCCAGATCAACCTCAAA
TTTAGCGATGAACAAGTGGTTAACTTCTTTAAAGATATAGTTGCACATCATGATCCCAAT
CCTCAAGGTTTTAAGGATGTCAAACAACAGATTTCTACTTACTTCAAAAGTAAAAATCTT
CTCCCTCTACGAGTTGGTTATGCTGAATTTAAGCAAAGGTACTTTAGTGGTCCATGGAGT
TTCCTTGTGTTCCTTGCTGTTATTTTCACGGTTAGTATGACTGTAATTCAGACCGTCTTC
ACAGGCATTCAGACATACAAAAAAGACTGA