Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033081
CDS Infomation

pacid=37475732 polypeptide=PGSC0003DMP400022510 locus=PGSC0003DMG400012703 ID=PGSC0003DMT400033081.v4.03 annot-version=v4.03
Sequence

ATGGATGCTATGGATGCTATGGATGCTGAGGATGAAGTTCCTGTCTCAACTTCAGAACCT
TCAACTCTAGTTGATGATAATTCAACTGTGGTTAATGCTATAGGTGCAGTTAATCTTCAA
CCAGTTCCAGCTGTCATTCCACCAGTTGTTCCAATGGTTATCCTTCCTCCTGTCGTGCCT
GCAATTGCTCCAAGGCTTGCAGTTCCTACCCCTATTCCTCCCCCATTAGCTCCGTTGCCT
GTTCGTCCACCTGTCCTTAGGCCTCCGGTAGCTCAGAATGGAGAAATGCAAGAGAGTGAT
TCAGATTCAGACCTTGAAGAAATGGTATCCGGTCGTGGTGCTGCGGGCTCCACGCAAGAA
TATGAGATCTCTGAGGAGAGTAGAATTGTCCGAGAGAGGCAGGAAAAGGCGCTGCAGGAG
CTTCTCATGAAGAGACGTGCTGCTGCGCTAGCAGTTCCTACAAATGATATGGCCGTTCGA
GCTCGACTGCGAAGGCTTGGCGAGCCAATAACTCTCTTTGGAGAAAGGGAGATGGAAAGA
AGGGATCGACTGCGGATGCTTATGGCAAGGCTTGATGCAGAAGGGCAGCTGGAAAAGCTG
ATGAAAGCTCATGAGGATGAAGAAGCTGCAGCTTCTGCTGCACCAGCAGAGGAGGAGGAT
ATTCAATACCCTTTTTACACAGAAGGATCAAAAGCACTTTTAGATGCTAGGGTAGAAATC
GCAAAGTATTCTTTAGTTAAGTCGGCTTTACGTCTCCATCGTGCAAGGAGGAAAAGGGAT
GATCCAGATGAAGATGTGGATGCAGAGGTTGATTGGGCTTTAAAGCAAGCAGGGAGCCTG
GCCCTTGATTGCAGTGAAATTGGAGACGATCGACCCCTTTTTGGATGCTCGCTTTCACAT
GATGGAAAGATGCTTGCGACCTGTTCTCTGAGTGGTATAGCAAAAATATGGAGTATGCCT
CAAGTGCAAAAGGTTTCCACTCTAAAAGGTCACACTGAACGAGCTACTGATGTTGCGTTC
TCTCCGACAAGCAATTATTTAGCTACTGCATCTGCTGACAAGACCGCAAGGTTATGGAAC
TCAGAAGGTTCTCTCCTCAGAACTTTTGAGGGACATTTGGACCGTCTAGCTCGGATTGCT
TTTCATCCTTCCGGAAAATACTTGGGCACAGCTAGCTTCGACAAAACTTGGAGATTATGG
AATGTGGAGAGTGGTGAAGAGCTGCTTTTGCAAGAAGGTCACAGTAGGAGTGTTTATGGA
TTGTCTTTTCACCATGATGGTTCATTAGTGGCATCATGCGGGTTGGATGCACTTGTTCGA
GTGTGGGATTTAAGGACTGGGCGAAGTATTCTTGCTCTAGAAGGCCACGTTAAACCGGTT
CTTGGTGTCAGTTTTTCACCGAATGGTTATCATTTGGCTAGTGGTGGTGAAGATAATACC
TGTCGTATTTGGGACTTAAGGCAGAGAAGATCTTCTTACATCATACCAGCTCACTCCAAT
CTTATCTCTCAAGTTAAGTTTGAGCCTCAGGAGGGATACTTTTTGGCTACAGCTTCCTAT
GATATGACTGCTAAGGTATGGTCATCAAGGGATTTCAAGCCTGTAAAGACACTCTCTGGT
CATGAAGCAAAAATCATGTCATTGGATGTTGCGGCAGATGGACAATTCATTACAACCGTG
TCTTATGATCGAACAATCAAGCTGTGGTCAAGCAAAAACATTGAGAAGGAAGAGAAAATG
GATATGGACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400022510
PEP Infomation

pacid=37475732 transcript=PGSC0003DMT400033081 locus=PGSC0003DMG400012703 ID=PGSC0003DMT400033081.v4.03 annot-version=v4.03
Sequence

MDAMDAMDAEDEVPVSTSEPSTLVDDNSTVVNAIGAVNLQPVPAVIPPVVPMVILPPVVP
AIAPRLAVPTPIPPPLAPLPVRPPVLRPPVAQNGEMQESDSDSDLEEMVSGRGAAGSTQE
YEISEESRIVRERQEKALQELLMKRRAAALAVPTNDMAVRARLRRLGEPITLFGEREMER
RDRLRMLMARLDAEGQLEKLMKAHEDEEAAASAAPAEEEDIQYPFYTEGSKALLDARVEI
AKYSLVKSALRLHRARRKRDDPDEDVDAEVDWALKQAGSLALDCSEIGDDRPLFGCSLSH
DGKMLATCSLSGIAKIWSMPQVQKVSTLKGHTERATDVAFSPTSNYLATASADKTARLWN
SEGSLLRTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWNVESGEELLLQEGHSRSVYG
LSFHHDGSLVASCGLDALVRVWDLRTGRSILALEGHVKPVLGVSFSPNGYHLASGGEDNT
CRIWDLRQRRSSYIIPAHSNLISQVKFEPQEGYFLATASYDMTAKVWSSRDFKPVKTLSG
HEAKIMSLDVAADGQFITTVSYDRTIKLWSSKNIEKEEKMDMD*

Transcript Sequence

Transcript ID

PGSC0003DMT400033081
Transcript Infomation

pacid=37475732 locus=PGSC0003DMG400012703 ID=PGSC0003DMT400033081.v4.03 annot-version=v4.03
Sequence

ATGGATGCTATGGATGCTATGGATGCTGAGGATGAAGTTCCTGTCTCAACTTCAGAACCT
TCAACTCTAGTTGATGATAATTCAACTGTGGTTAATGCTATAGGTGCAGTTAATCTTCAA
CCAGTTCCAGCTGTCATTCCACCAGTTGTTCCAATGGTTATCCTTCCTCCTGTCGTGCCT
GCAATTGCTCCAAGGCTTGCAGTTCCTACCCCTATTCCTCCCCCATTAGCTCCGTTGCCT
GTTCGTCCACCTGTCCTTAGGCCTCCGGTAGCTCAGAATGGAGAAATGCAAGAGAGTGAT
TCAGATTCAGACCTTGAAGAAATGGTATCCGGTCGTGGTGCTGCGGGCTCCACGCAAGAA
TATGAGATCTCTGAGGAGAGTAGAATTGTCCGAGAGAGGCAGGAAAAGGCGCTGCAGGAG
CTTCTCATGAAGAGACGTGCTGCTGCGCTAGCAGTTCCTACAAATGATATGGCCGTTCGA
GCTCGACTGCGAAGGCTTGGCGAGCCAATAACTCTCTTTGGAGAAAGGGAGATGGAAAGA
AGGGATCGACTGCGGATGCTTATGGCAAGGCTTGATGCAGAAGGGCAGCTGGAAAAGCTG
ATGAAAGCTCATGAGGATGAAGAAGCTGCAGCTTCTGCTGCACCAGCAGAGGAGGAGGAT
ATTCAATACCCTTTTTACACAGAAGGATCAAAAGCACTTTTAGATGCTAGGGTAGAAATC
GCAAAGTATTCTTTAGTTAAGTCGGCTTTACGTCTCCATCGTGCAAGGAGGAAAAGGGAT
GATCCAGATGAAGATGTGGATGCAGAGGTTGATTGGGCTTTAAAGCAAGCAGGGAGCCTG
GCCCTTGATTGCAGTGAAATTGGAGACGATCGACCCCTTTTTGGATGCTCGCTTTCACAT
GATGGAAAGATGCTTGCGACCTGTTCTCTGAGTGGTATAGCAAAAATATGGAGTATGCCT
CAAGTGCAAAAGGTTTCCACTCTAAAAGGTCACACTGAACGAGCTACTGATGTTGCGTTC
TCTCCGACAAGCAATTATTTAGCTACTGCATCTGCTGACAAGACCGCAAGGTTATGGAAC
TCAGAAGGTTCTCTCCTCAGAACTTTTGAGGGACATTTGGACCGTCTAGCTCGGATTGCT
TTTCATCCTTCCGGAAAATACTTGGGCACAGCTAGCTTCGACAAAACTTGGAGATTATGG
AATGTGGAGAGTGGTGAAGAGCTGCTTTTGCAAGAAGGTCACAGTAGGAGTGTTTATGGA
TTGTCTTTTCACCATGATGGTTCATTAGTGGCATCATGCGGGTTGGATGCACTTGTTCGA
GTGTGGGATTTAAGGACTGGGCGAAGTATTCTTGCTCTAGAAGGCCACGTTAAACCGGTT
CTTGGTGTCAGTTTTTCACCGAATGGTTATCATTTGGCTAGTGGTGGTGAAGATAATACC
TGTCGTATTTGGGACTTAAGGCAGAGAAGATCTTCTTACATCATACCAGCTCACTCCAAT
CTTATCTCTCAAGTTAAGTTTGAGCCTCAGGAGGGATACTTTTTGGCTACAGCTTCCTAT
GATATGACTGCTAAGGTATGGTCATCAAGGGATTTCAAGCCTGTAAAGACACTCTCTGGT
CATGAAGCAAAAATCATGTCATTGGATGTTGCGGCAGATGGACAATTCATTACAACCGTG
TCTTATGATCGAACAATCAAGCTGTGGTCAAGCAAAAACATTGAGAAGGAAGAGAAAATG
GATATGGACTAG