Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033039
CDS Infomation

pacid=37426470 polypeptide=PGSC0003DMP400022483 locus=PGSC0003DMG400012684 ID=PGSC0003DMT400033039.v4.03 annot-version=v4.03
Sequence

ATGCCGGCCGACCCAGATAACTCATCCGCCATGAACGATTCTACAGGCTCAGGTGAAGCA
AGCGTTTCATCTTCAGGTAATCAAGCAGTTCCTCTGAAAGAATCAGCCAAGAAGAAACGA
AATCTTCCTGGGATGCCAGATCCCGATGCAGAGGTTATTGCTTTGTCACCAACAACTTTG
ATGGCCACGAACAGATTTGTTTGTGAAATTTGCAGTAAAGGGTTTCAAAGAGACCAGAAT
TTGCAGCTTCATAGAAGAGGTCATAATTTGCCATGGAAGCTGAGGCAGAGATCAAGCAAT
GAGGTGAAGAAGAGAGTGTATGTTTGCCCTGAATCCAGTTGTGTTCACCATGATCCTTCT
CGGGCATTGGGTGATTTGACCGGAATCAAGAAACATTTCTGCCGTAAACATGGTGAGAAG
AAATGGAAATGTGACAAATGCTCCAAGAAATATGCAGTTCAGTCTGATTTGAAGGCTCAT
TCAAAGATTTGTGGAACTAGAGAGTATAAATGTGATTGTGGCACTTTATTTTCAAGGAGG
GATAGCTTTATCACCCATAGGGCATTTTGTGATGCATTAGCTCAAGAAAGTGCTAAAACA
CTGCCAGAGAAGCCTCCTAGTACTAATGAGGAGCCTAAAACACAAGCTGTTGCTTCATCA
TCACCACCGCCGCCAACGCCACCGGCGCCTCCACCTGCCACCGAGTCTCAACCACCACCA
CCAGCTCCAAAGCCTTTAATGACCCCAACAGTTCCTCCGTCAACTGCCGTAATGACATTT
GCTTCCTCTGTTCAGAATCAAGAGTTGCGGGAGAATCCAATCACAAATTCTGCTGGAACT
GCTACGAAACAGGTTCTGGAGGAAGCAGCGGCGGTAGCAAGCTTGACTGGAAACTGTAGC
AGCTCTTGTAGTAATGGAAGTAGTAGCAGCAGTGTCTTCGGAAGCTTGTTTGCTTCATCA
ACAGCTTCGGGAAATTTGCCATCTCAAGCTCCTGTTTTTTCTGATATGTTTCGAGCTATG
GCGCCTGAGAGCACTCTTGAGATGGCACCACCTTCATCTACAGAACCAATATCTCTCGGC
CTAGCGATGAGTCACAGTTCATCATTTTTTAGACAAGCTGGTCAAGAACGGAGGCAATAT
GCTCCCACACCACAACCAGCTATGTCGGCAACAGCATTGCTGCAGAAGGCAGCTCAGATG
GGTGCAGTAGCGACCAGCTCATCGTTCTTGAGGGGATTTGGGGTTATGTCCTCCACGTCG
TCTTCTAACGGGTATCAAGAATGGAGTGGGAGGCCAATTGATGCCAATGGTGCGTCATAT
GCTGCAGGTCTTGGTCTTGGACTGCCGTGTGACGGTGGTTCTGGTCTGAAGGAATTAATG
TTGGGAACTCCCTCTATGTTTGGTCCCAAACATCCTACTCTTGACCTTCTTGGATTAGGA
ATGGCAGCTAGTGTCGGTCCATCGCCTGGATTATCTGCCCTTATAACATCCATGGGTAGT
AATCTTGACATGGTGACTTCAGCTGGATCATTTGGTACTGCCGATTTCAGTGGTAAAGAC
TTGGGAAGAAATTCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400022483
PEP Infomation

pacid=37426470 transcript=PGSC0003DMT400033039 locus=PGSC0003DMG400012684 ID=PGSC0003DMT400033039.v4.03 annot-version=v4.03
Sequence

MPADPDNSSAMNDSTGSGEASVSSSGNQAVPLKESAKKKRNLPGMPDPDAEVIALSPTTL
MATNRFVCEICSKGFQRDQNLQLHRRGHNLPWKLRQRSSNEVKKRVYVCPESSCVHHDPS
RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDLKAHSKICGTREYKCDCGTLFSRR
DSFITHRAFCDALAQESAKTLPEKPPSTNEEPKTQAVASSSPPPPTPPAPPPATESQPPP
PAPKPLMTPTVPPSTAVMTFASSVQNQELRENPITNSAGTATKQVLEEAAAVASLTGNCS
SSCSNGSSSSSVFGSLFASSTASGNLPSQAPVFSDMFRAMAPESTLEMAPPSSTEPISLG
LAMSHSSSFFRQAGQERRQYAPTPQPAMSATALLQKAAQMGAVATSSSFLRGFGVMSSTS
SSNGYQEWSGRPIDANGASYAAGLGLGLPCDGGSGLKELMLGTPSMFGPKHPTLDLLGLG
MAASVGPSPGLSALITSMGSNLDMVTSAGSFGTADFSGKDLGRNS*

Transcript Sequence

Transcript ID

PGSC0003DMT400033039
Transcript Infomation

pacid=37426470 locus=PGSC0003DMG400012684 ID=PGSC0003DMT400033039.v4.03 annot-version=v4.03
Sequence

ATGCCGGCCGACCCAGATAACTCATCCGCCATGAACGATTCTACAGGCTCAGGTGAAGCA
AGCGTTTCATCTTCAGGTAATCAAGCAGTTCCTCTGAAAGAATCAGCCAAGAAGAAACGA
AATCTTCCTGGGATGCCAGATCCCGATGCAGAGGTTATTGCTTTGTCACCAACAACTTTG
ATGGCCACGAACAGATTTGTTTGTGAAATTTGCAGTAAAGGGTTTCAAAGAGACCAGAAT
TTGCAGCTTCATAGAAGAGGTCATAATTTGCCATGGAAGCTGAGGCAGAGATCAAGCAAT
GAGGTGAAGAAGAGAGTGTATGTTTGCCCTGAATCCAGTTGTGTTCACCATGATCCTTCT
CGGGCATTGGGTGATTTGACCGGAATCAAGAAACATTTCTGCCGTAAACATGGTGAGAAG
AAATGGAAATGTGACAAATGCTCCAAGAAATATGCAGTTCAGTCTGATTTGAAGGCTCAT
TCAAAGATTTGTGGAACTAGAGAGTATAAATGTGATTGTGGCACTTTATTTTCAAGGAGG
GATAGCTTTATCACCCATAGGGCATTTTGTGATGCATTAGCTCAAGAAAGTGCTAAAACA
CTGCCAGAGAAGCCTCCTAGTACTAATGAGGAGCCTAAAACACAAGCTGTTGCTTCATCA
TCACCACCGCCGCCAACGCCACCGGCGCCTCCACCTGCCACCGAGTCTCAACCACCACCA
CCAGCTCCAAAGCCTTTAATGACCCCAACAGTTCCTCCGTCAACTGCCGTAATGACATTT
GCTTCCTCTGTTCAGAATCAAGAGTTGCGGGAGAATCCAATCACAAATTCTGCTGGAACT
GCTACGAAACAGGTTCTGGAGGAAGCAGCGGCGGTAGCAAGCTTGACTGGAAACTGTAGC
AGCTCTTGTAGTAATGGAAGTAGTAGCAGCAGTGTCTTCGGAAGCTTGTTTGCTTCATCA
ACAGCTTCGGGAAATTTGCCATCTCAAGCTCCTGTTTTTTCTGATATGTTTCGAGCTATG
GCGCCTGAGAGCACTCTTGAGATGGCACCACCTTCATCTACAGAACCAATATCTCTCGGC
CTAGCGATGAGTCACAGTTCATCATTTTTTAGACAAGCTGGTCAAGAACGGAGGCAATAT
GCTCCCACACCACAACCAGCTATGTCGGCAACAGCATTGCTGCAGAAGGCAGCTCAGATG
GGTGCAGTAGCGACCAGCTCATCGTTCTTGAGGGGATTTGGGGTTATGTCCTCCACGTCG
TCTTCTAACGGGTATCAAGAATGGAGTGGGAGGCCAATTGATGCCAATGGTGCGTCATAT
GCTGCAGGTCTTGGTCTTGGACTGCCGTGTGACGGTGGTTCTGGTCTGAAGGAATTAATG
TTGGGAACTCCCTCTATGTTTGGTCCCAAACATCCTACTCTTGACCTTCTTGGATTAGGA
ATGGCAGCTAGTGTCGGTCCATCGCCTGGATTATCTGCCCTTATAACATCCATGGGTAGT
AATCTTGACATGGTGACTTCAGCTGGATCATTTGGTACTGCCGATTTCAGTGGTAAAGAC
TTGGGAAGAAATTCATGA