Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400033003
CDS Infomation

pacid=37427954 polypeptide=PGSC0003DMP400022454 locus=PGSC0003DMG400012672 ID=PGSC0003DMT400033003.v4.03 annot-version=v4.03
Sequence

ATGGTGATGGAGGAGAAGCCAAAGAAGCTATTAATTTTATATGCATCTGAGACTGGTAAT
GCCATAGACGCCGCTGAGCGTCTTGGCCGTGAAGCTGAGCGTAGAGGATGCCCCGTCTTG
TTGCTCTCTGTTGATGATTTTGACCCTAGTTCTCTACCGGACCAAGAAATTGTAATCTTT
GTGGTCTCAACTACAGGTCAAGGGGACAACCCAGATTCTATTAAGGTATTTTGGAAGTTT
CTCTTGCAAAGGAATCTTACCCAGAACTGGCTTAGTAGAGTCAACTATGCTGTGTTTGGT
TTGGGTGATTCAGGCTACCAGAAATATAATTTCGTTGCAAAGAAACTTGACAAAAGACTT
TCAGATCTTGGTGCGACAGCAGTGGTGGAAAGAGGTCTGGGAGATGATCAGCACTCTTCA
GGGTATGAAGGTGCTCTGGATCCTTGGATGTCCACCTTGTGGAAAGCATTATACCAAAAA
GATCCGAAATTATTTCCTAAAGGTCCAGAATTGATGACTTCAAATATGAGTTTGATGGAT
CAACCTAAAGTACAGATTACTTATCATGATGTTGTGGAAGGGACTTCAAACTTTTCATCT
ATCCCAGATGTCAAGCTTCTCGAAATGCAGATTGAGAGCACGCGCTTCATATTGCCAGGA
AAACTTGCTGGAAAGTACAGTCCCGAGTGCTTCTTAAAAATGGTTAAAAATGATCCATTA
AGTAAGGCTGGCTCTGGGAAAGATGTCCGCCATTTTGAATTTGAAGCTGTTTCATCTAGT
ATTGAGTATGAGGTTGGTGATGTTGTTCATATTCTCCCTGGCCAAGATGCTGCAGCTGTA
GATGCCTTCATAAAGCGCTGTAATTTGAACCCTGAATCATATATCCAAGTTCAGGTTAAT
GATAATAAAGAAAATGAACAAAGTTATGATTTGAGAAATACATTGAAGGTCCCTGTAAGA
TTGAAAACTTTTGTGGAACTGGCAATGGATGTTGCATCAGCTTCCCCAAGACGATATTTC
TTTGAGGTTATGAGTTATTTTGCTACTGCCGAACATGAGAAGGAGAGGCTTCAATACTTT
GCTTCACCAGAAGGAAGAGATGATCTTTATGAGTACAATCAGAAGGAACGTAGAACTGTA
CTGGAGGTATTGGATGATTTTCCATCCGTTCAGATGCCTTTTGAATGGTTGGTTCAGTTG
GTACCTCCACTAAAAACTAGGGCTTTTTCCATCTCTTCTTCTCACTCAGCTCATCCAAAC
CAAGTGCATTTAACTGTTAGTGTGGTATCGTGGACAACACCTTATAAGAGGAAGCGCACG
GGTCTTTGCTCGTCATGGCTAGCTGAACTTGATCCTCAGAAAAGTGGCCTCATACCGGCA
TGGTTTCAAAAAGGTTCTCTTCCTTCCCCTCCACCTTCACTTCCTCTTATTCTAATTGGA
CCTGGCACAGGGTGTGCACCTTTTCGTGGATTTGTGGAGGAAAGAGCCCTTCAGAGTCAA
TCCGGTCCTACTGCTCCCATTCTTTTCTTCTTTGGTTGTAGAAATGAAGAAAATGACTTC
TTATACCGAGATTTTTGGTTGTTTCATTCACAAAAGGGGGGAGTCCTTTCTGAAGAAAAA
GGTGGCGGCTTTTTTGTTGCCTTCTCCAGAGACCAGCAACAGAAGGTTTATGTGCAGCAT
AAAATGAGAGAAGAAAGCTTTAAGATATGGAATCTATTAACCGAGGGGGCAGCTGTGTAT
GTCGCAGGCTCTGCCAATAAAATGCCTTCTGATGTGCTGTTGGCATTTGAAGAAATTGTA
TCTAAAGAAGGCGGGGTTCCAAAGGAAGCTGCAGTCAGGTGGCTTAGGGCATTGGAAAAG
GCAGGCAAGTATCATGTCGAAGCATGGTCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400022454
PEP Infomation

pacid=37427954 transcript=PGSC0003DMT400033003 locus=PGSC0003DMG400012672 ID=PGSC0003DMT400033003.v4.03 annot-version=v4.03
Sequence

MVMEEKPKKLLILYASETGNAIDAAERLGREAERRGCPVLLLSVDDFDPSSLPDQEIVIF
VVSTTGQGDNPDSIKVFWKFLLQRNLTQNWLSRVNYAVFGLGDSGYQKYNFVAKKLDKRL
SDLGATAVVERGLGDDQHSSGYEGALDPWMSTLWKALYQKDPKLFPKGPELMTSNMSLMD
QPKVQITYHDVVEGTSNFSSIPDVKLLEMQIESTRFILPGKLAGKYSPECFLKMVKNDPL
SKAGSGKDVRHFEFEAVSSSIEYEVGDVVHILPGQDAAAVDAFIKRCNLNPESYIQVQVN
DNKENEQSYDLRNTLKVPVRLKTFVELAMDVASASPRRYFFEVMSYFATAEHEKERLQYF
ASPEGRDDLYEYNQKERRTVLEVLDDFPSVQMPFEWLVQLVPPLKTRAFSISSSHSAHPN
QVHLTVSVVSWTTPYKRKRTGLCSSWLAELDPQKSGLIPAWFQKGSLPSPPPSLPLILIG
PGTGCAPFRGFVEERALQSQSGPTAPILFFFGCRNEENDFLYRDFWLFHSQKGGVLSEEK
GGGFFVAFSRDQQQKVYVQHKMREESFKIWNLLTEGAAVYVAGSANKMPSDVLLAFEEIV
SKEGGVPKEAAVRWLRALEKAGKYHVEAWS*

Transcript Sequence

Transcript ID

PGSC0003DMT400033003
Transcript Infomation

pacid=37427954 locus=PGSC0003DMG400012672 ID=PGSC0003DMT400033003.v4.03 annot-version=v4.03
Sequence

ATGGTGATGGAGGAGAAGCCAAAGAAGCTATTAATTTTATATGCATCTGAGACTGGTAAT
GCCATAGACGCCGCTGAGCGTCTTGGCCGTGAAGCTGAGCGTAGAGGATGCCCCGTCTTG
TTGCTCTCTGTTGATGATTTTGACCCTAGTTCTCTACCGGACCAAGAAATTGTAATCTTT
GTGGTCTCAACTACAGGTCAAGGGGACAACCCAGATTCTATTAAGGTATTTTGGAAGTTT
CTCTTGCAAAGGAATCTTACCCAGAACTGGCTTAGTAGAGTCAACTATGCTGTGTTTGGT
TTGGGTGATTCAGGCTACCAGAAATATAATTTCGTTGCAAAGAAACTTGACAAAAGACTT
TCAGATCTTGGTGCGACAGCAGTGGTGGAAAGAGGTCTGGGAGATGATCAGCACTCTTCA
GGGTATGAAGGTGCTCTGGATCCTTGGATGTCCACCTTGTGGAAAGCATTATACCAAAAA
GATCCGAAATTATTTCCTAAAGGTCCAGAATTGATGACTTCAAATATGAGTTTGATGGAT
CAACCTAAAGTACAGATTACTTATCATGATGTTGTGGAAGGGACTTCAAACTTTTCATCT
ATCCCAGATGTCAAGCTTCTCGAAATGCAGATTGAGAGCACGCGCTTCATATTGCCAGGA
AAACTTGCTGGAAAGTACAGTCCCGAGTGCTTCTTAAAAATGGTTAAAAATGATCCATTA
AGTAAGGCTGGCTCTGGGAAAGATGTCCGCCATTTTGAATTTGAAGCTGTTTCATCTAGT
ATTGAGTATGAGGTTGGTGATGTTGTTCATATTCTCCCTGGCCAAGATGCTGCAGCTGTA
GATGCCTTCATAAAGCGCTGTAATTTGAACCCTGAATCATATATCCAAGTTCAGGTTAAT
GATAATAAAGAAAATGAACAAAGTTATGATTTGAGAAATACATTGAAGGTCCCTGTAAGA
TTGAAAACTTTTGTGGAACTGGCAATGGATGTTGCATCAGCTTCCCCAAGACGATATTTC
TTTGAGGTTATGAGTTATTTTGCTACTGCCGAACATGAGAAGGAGAGGCTTCAATACTTT
GCTTCACCAGAAGGAAGAGATGATCTTTATGAGTACAATCAGAAGGAACGTAGAACTGTA
CTGGAGGTATTGGATGATTTTCCATCCGTTCAGATGCCTTTTGAATGGTTGGTTCAGTTG
GTACCTCCACTAAAAACTAGGGCTTTTTCCATCTCTTCTTCTCACTCAGCTCATCCAAAC
CAAGTGCATTTAACTGTTAGTGTGGTATCGTGGACAACACCTTATAAGAGGAAGCGCACG
GGTCTTTGCTCGTCATGGCTAGCTGAACTTGATCCTCAGAAAAGTGGCCTCATACCGGCA
TGGTTTCAAAAAGGTTCTCTTCCTTCCCCTCCACCTTCACTTCCTCTTATTCTAATTGGA
CCTGGCACAGGGTGTGCACCTTTTCGTGGATTTGTGGAGGAAAGAGCCCTTCAGAGTCAA
TCCGGTCCTACTGCTCCCATTCTTTTCTTCTTTGGTTGTAGAAATGAAGAAAATGACTTC
TTATACCGAGATTTTTGGTTGTTTCATTCACAAAAGGGGGGAGTCCTTTCTGAAGAAAAA
GGTGGCGGCTTTTTTGTTGCCTTCTCCAGAGACCAGCAACAGAAGGTTTATGTGCAGCAT
AAAATGAGAGAAGAAAGCTTTAAGATATGGAATCTATTAACCGAGGGGGCAGCTGTGTAT
GTCGCAGGCTCTGCCAATAAAATGCCTTCTGATGTGCTGTTGGCATTTGAAGAAATTGTA
TCTAAAGAAGGCGGGGTTCCAAAGGAAGCTGCAGTCAGGTGGCTTAGGGCATTGGAAAAG
GCAGGCAAGTATCATGTCGAAGCATGGTCTTAA