Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032997
CDS Infomation

pacid=37426568 polypeptide=PGSC0003DMP400022449 locus=PGSC0003DMG400012671 ID=PGSC0003DMT400032997.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGAAGACGAAGAAGGCAACGAAGCCATCGCGCAACGATTCAGAATCTACCATC
TGGTCATTTCTGACTCAAAAGGGCACTACAGCTTCCTTCATTTGCATCACTCTGTTTGCT
ATTTTGGTGCGAATTGCAGTATCAATCCACCCCTATTCAGGCGCCGGAACTCCGCCTAAG
TATGGAGATTACGAGGCTCAGCGGCATTGGATGGAGATCACTCTTAATCTCCCTGTTAGA
GAATGGTACCGAAATAGCACTGTCAATGATTTGAAATACTGGGGTCTAGATTACCCTCCT
CTTACAGCGTATCAGAGCTATATTCATGGCCTTTTCCTCAGATATTTTGATCCACAGTCA
GTTGAACTCTACACTTCTCGCGGCTACGAGTCTTATATTGGAAAATTGTTGATGCGGTGG
ACAGTGTTATTGTCCGATGTCTTAATATTTTTTCCTGCTGTTATTTATTTTATAATTGTA
TATTACTCCGGTATTCATGAGGGGTCGAAAAGTGGTAGGCTGTGGCACTTTGCCATGATT
TTGTTGAATCCATGTCTCATCTTGATTGATCATGGTCATTTTCAGTACAATTGTATTAGC
TTGGGGTTTACTGTTGCTGCGGTTTCTGCAATCCTATCTGATAGAGACATTGTTGGTTCA
ATCTTGTTCTCTCTTGCTCTTAACCATAAACAGATGAGTGCCTATTTTGCACCTGCAATT
TTTGGCTATCTCTTTGGCAAGTGCTTAAGGCGCCATAATCCTTTTCTTGAGGTCTTGAAA
TTGGGCTTGGCGGTGTTAGGAACGTTCACTGTTCTTTGGTGGCCATATCTTTATTCTTTG
GAAGCACCTTTCGAGGTTCTTTCCCGCCTAGCTCCTTTTGAGAGGGGCATATATGAGGAT
TATGTGGCTAACTTCTGGTGTACCACTTCAGTCATTGTGAAGTGGAAGAGGTTGTTCAGT
ACTCAAGCACTAAGGATTCTAAGTCTTGTTTCAACTGTTTCCACGTGTCTGCCCTCAATG
GTGCTGCTAATATTGGCACCGAGCAGAAGAAACTTCCTGTTTGGACTGCTCAGCAGTGCT
TTATCATTCTACTTCTTCTCATTTCAAGTTCATGAGAAATCTATTCTGCTGCCTCTTCTT
CCAGCAAGCTTCTTGGCGATTGATGAGCCTCTTATTTTTCGCTGGCTAACATATTTTGCC
CTGCTCTCTATGTTCCCTCTTCTAAGGCGTGATGAATTGATTCTTCCATACGTTGCTTTA
TATGGTCTCTTTGTCCTCCTGTACAATGCACCTGTTCAAAGAGAAGACACAAGGCAGACT
CGCTCTCCTTTTACAACTTTAAAATATTTTGTCATCGCCTGCTCTCTTCTTCTGCATATT
GTTTACTTCATGATAACTCCACCAAGAAGGTACCCCTTCCTCTTTGAGGCAGTAATGATG
CTCCTCTGCTTCTCTCAGTTCTTTTTTATTTTTATGTACACAAACATGAAACAATGGGAG
CTCTTGAAGCTTTCCAGTCAAACAGTTAGAGAAAAGAAAAATATTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400022449
PEP Infomation

pacid=37426568 transcript=PGSC0003DMT400032997 locus=PGSC0003DMG400012671 ID=PGSC0003DMT400032997.v4.03 annot-version=v4.03
Sequence

MEKKTKKATKPSRNDSESTIWSFLTQKGTTASFICITLFAILVRIAVSIHPYSGAGTPPK
YGDYEAQRHWMEITLNLPVREWYRNSTVNDLKYWGLDYPPLTAYQSYIHGLFLRYFDPQS
VELYTSRGYESYIGKLLMRWTVLLSDVLIFFPAVIYFIIVYYSGIHEGSKSGRLWHFAMI
LLNPCLILIDHGHFQYNCISLGFTVAAVSAILSDRDIVGSILFSLALNHKQMSAYFAPAI
FGYLFGKCLRRHNPFLEVLKLGLAVLGTFTVLWWPYLYSLEAPFEVLSRLAPFERGIYED
YVANFWCTTSVIVKWKRLFSTQALRILSLVSTVSTCLPSMVLLILAPSRRNFLFGLLSSA
LSFYFFSFQVHEKSILLPLLPASFLAIDEPLIFRWLTYFALLSMFPLLRRDELILPYVAL
YGLFVLLYNAPVQREDTRQTRSPFTTLKYFVIACSLLLHIVYFMITPPRRYPFLFEAVMM
LLCFSQFFFIFMYTNMKQWELLKLSSQTVREKKNI*

Transcript Sequence

Transcript ID

PGSC0003DMT400032997
Transcript Infomation

pacid=37426568 locus=PGSC0003DMG400012671 ID=PGSC0003DMT400032997.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGAAGACGAAGAAGGCAACGAAGCCATCGCGCAACGATTCAGAATCTACCATC
TGGTCATTTCTGACTCAAAAGGGCACTACAGCTTCCTTCATTTGCATCACTCTGTTTGCT
ATTTTGGTGCGAATTGCAGTATCAATCCACCCCTATTCAGGCGCCGGAACTCCGCCTAAG
TATGGAGATTACGAGGCTCAGCGGCATTGGATGGAGATCACTCTTAATCTCCCTGTTAGA
GAATGGTACCGAAATAGCACTGTCAATGATTTGAAATACTGGGGTCTAGATTACCCTCCT
CTTACAGCGTATCAGAGCTATATTCATGGCCTTTTCCTCAGATATTTTGATCCACAGTCA
GTTGAACTCTACACTTCTCGCGGCTACGAGTCTTATATTGGAAAATTGTTGATGCGGTGG
ACAGTGTTATTGTCCGATGTCTTAATATTTTTTCCTGCTGTTATTTATTTTATAATTGTA
TATTACTCCGGTATTCATGAGGGGTCGAAAAGTGGTAGGCTGTGGCACTTTGCCATGATT
TTGTTGAATCCATGTCTCATCTTGATTGATCATGGTCATTTTCAGTACAATTGTATTAGC
TTGGGGTTTACTGTTGCTGCGGTTTCTGCAATCCTATCTGATAGAGACATTGTTGGTTCA
ATCTTGTTCTCTCTTGCTCTTAACCATAAACAGATGAGTGCCTATTTTGCACCTGCAATT
TTTGGCTATCTCTTTGGCAAGTGCTTAAGGCGCCATAATCCTTTTCTTGAGGTCTTGAAA
TTGGGCTTGGCGGTGTTAGGAACGTTCACTGTTCTTTGGTGGCCATATCTTTATTCTTTG
GAAGCACCTTTCGAGGTTCTTTCCCGCCTAGCTCCTTTTGAGAGGGGCATATATGAGGAT
TATGTGGCTAACTTCTGGTGTACCACTTCAGTCATTGTGAAGTGGAAGAGGTTGTTCAGT
ACTCAAGCACTAAGGATTCTAAGTCTTGTTTCAACTGTTTCCACGTGTCTGCCCTCAATG
GTGCTGCTAATATTGGCACCGAGCAGAAGAAACTTCCTGTTTGGACTGCTCAGCAGTGCT
TTATCATTCTACTTCTTCTCATTTCAAGTTCATGAGAAATCTATTCTGCTGCCTCTTCTT
CCAGCAAGCTTCTTGGCGATTGATGAGCCTCTTATTTTTCGCTGGCTAACATATTTTGCC
CTGCTCTCTATGTTCCCTCTTCTAAGGCGTGATGAATTGATTCTTCCATACGTTGCTTTA
TATGGTCTCTTTGTCCTCCTGTACAATGCACCTGTTCAAAGAGAAGACACAAGGCAGACT
CGCTCTCCTTTTACAACTTTAAAATATTTTGTCATCGCCTGCTCTCTTCTTCTGCATATT
GTTTACTTCATGATAACTCCACCAAGAAGGTACCCCTTCCTCTTTGAGGCAGTAATGATG
CTCCTCTGCTTCTCTCAGTTCTTTTTTATTTTTATGTACACAAACATGAAACAATGGGAG
CTCTTGAAGCTTTCCAGTCAAACAGTTAGAGAAAAGAAAAATATTTAG