Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032970
CDS Infomation

pacid=37426457 polypeptide=PGSC0003DMP400022432 locus=PGSC0003DMG400012663 ID=PGSC0003DMT400032970.v4.03 annot-version=v4.03
Sequence

ATGAACATCTCAACTCTAAGGCTCGATTCCAATCCAATCACCACGGCAACGGCGACTCAC
CGGAATGGGATCCTCGGTTGCAATGGGACCTATAGTTGTAGGTTCAATCAGTTCCAGCAG
AGGAAGAAGACTCCTTCAGTTATCGTTTGTTCGACAAAGCCGCTTGCCTCGGTAGTCGAC
CATCAAGGGGTTAATGAGTCAGGGATGAGTCGAATTGAGTCACTCAGTCAGGTATCCGGC
GTGTTGGGTTGCCAATGGGGCGATGAAGGAAAGGGAAAGCTCGTTGATATACTGGCTAAG
CATTTCGACATTGTTGCTCGTTGTCAGGGTGGAGCAAATGCTGGGCACACTATTTACAAT
TCTGAGGGGAAGAAGTTTGCCCTGCACCTTGTCCCTTCTGGGATTCTCAACGAGGAAACT
CTATGTGTTATTGGTAATGGAGTTGTGGTGCATCTACCGGGACTTTTTAAAGAAATCGAT
GGTCTTGAAGCTAATGGAGTCTCTTGCCAAGGAAGGATCTTGGTATCTGATCGTGCACAC
TTGTTATTTGATTTTCACCAAGAAATAGATGGGCTTAGAGAAGCTGAGCTAGCTAAATCC
TTTATTGGAACCACCAAGAGAGGCATTGGGCCATGCTATTCAAGCAAGGTTATTAGAAAT
GGCTTAAGAGTAAGTGATTTAAGGCATATGGACACATTCCCCCAAAAGCTTGATCTTTTA
TTATCAGATGCCGCCGCAAGATTCCCAGGCTTTAAGTATGGTCCTGACATGCTCAGGGAA
GAAGTGGAACGCTATAAGAAATTTGCTGAGAGGTTGGAACCCTTTGTTGCAGATACTGTG
CACTTCATGAATGATGCTATATCTCAGAAAAAGAAGATTTTGGTGGAAGGTGGTCAGGCA
ACAATGTTGGATATTGATTTTGGAACATACCCTTTTGTGACTTCATCCAGTCCATCGGCT
GGTGGAATCTGCACAGGTCTTGGCATTGCTCCCAGAGTTGTTGGTGATCTTGTTGGTGTG
GTTAAGGCATATACCACAAGAGTTGGTTCTGGTCCTTTTCCAACAGAAATCATGGGCAAA
GGTGGTGACCTTCTTCGTTTTGCTGGGCAGGAGTTTGGCACAACTACTGGACGTCCGCGT
CGCTGTGGTTGGCTAGACATAGTTGCACTGAGATTCTGCTGTCAAATAAATGGATTTGCT
TCTCTTAACCTAACAAAACTAGATGTGCTGTCAGATCTACCAGAAATTCAATTGGGTGTT
ACTTACAGGCATCCTGATGGCTCAGCATTAAATTCTTTTCCCTCTGATCTTCGTCTTCTT
GAGCAAATAAAGGTGGAGTATGAAGTTTTGCCTGGGTGGAAGAGTGATATTTCTTCCATC
AGGAAGTATACTGACTTGCCTAAGGCTGCACGTGAGTATGTAGAAAGGATAGAGGAGCTT
GTTGGGGTCCCTATCCATTACATTGGTATAGGACCTGGCCGTGATGCCCTTATCTACAAG
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400022432
PEP Infomation

pacid=37426457 transcript=PGSC0003DMT400032970 locus=PGSC0003DMG400012663 ID=PGSC0003DMT400032970.v4.03 annot-version=v4.03
Sequence

MNISTLRLDSNPITTATATHRNGILGCNGTYSCRFNQFQQRKKTPSVIVCSTKPLASVVD
HQGVNESGMSRIESLSQVSGVLGCQWGDEGKGKLVDILAKHFDIVARCQGGANAGHTIYN
SEGKKFALHLVPSGILNEETLCVIGNGVVVHLPGLFKEIDGLEANGVSCQGRILVSDRAH
LLFDFHQEIDGLREAELAKSFIGTTKRGIGPCYSSKVIRNGLRVSDLRHMDTFPQKLDLL
LSDAAARFPGFKYGPDMLREEVERYKKFAERLEPFVADTVHFMNDAISQKKKILVEGGQA
TMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLVGVVKAYTTRVGSGPFPTEIMGK
GGDLLRFAGQEFGTTTGRPRRCGWLDIVALRFCCQINGFASLNLTKLDVLSDLPEIQLGV
TYRHPDGSALNSFPSDLRLLEQIKVEYEVLPGWKSDISSIRKYTDLPKAAREYVERIEEL
VGVPIHYIGIGPGRDALIYK*

Transcript Sequence

Transcript ID

PGSC0003DMT400032970
Transcript Infomation

pacid=37426457 locus=PGSC0003DMG400012663 ID=PGSC0003DMT400032970.v4.03 annot-version=v4.03
Sequence

ATGAACATCTCAACTCTAAGGCTCGATTCCAATCCAATCACCACGGCAACGGCGACTCAC
CGGAATGGGATCCTCGGTTGCAATGGGACCTATAGTTGTAGGTTCAATCAGTTCCAGCAG
AGGAAGAAGACTCCTTCAGTTATCGTTTGTTCGACAAAGCCGCTTGCCTCGGTAGTCGAC
CATCAAGGGGTTAATGAGTCAGGGATGAGTCGAATTGAGTCACTCAGTCAGGTATCCGGC
GTGTTGGGTTGCCAATGGGGCGATGAAGGAAAGGGAAAGCTCGTTGATATACTGGCTAAG
CATTTCGACATTGTTGCTCGTTGTCAGGGTGGAGCAAATGCTGGGCACACTATTTACAAT
TCTGAGGGGAAGAAGTTTGCCCTGCACCTTGTCCCTTCTGGGATTCTCAACGAGGAAACT
CTATGTGTTATTGGTAATGGAGTTGTGGTGCATCTACCGGGACTTTTTAAAGAAATCGAT
GGTCTTGAAGCTAATGGAGTCTCTTGCCAAGGAAGGATCTTGGTATCTGATCGTGCACAC
TTGTTATTTGATTTTCACCAAGAAATAGATGGGCTTAGAGAAGCTGAGCTAGCTAAATCC
TTTATTGGAACCACCAAGAGAGGCATTGGGCCATGCTATTCAAGCAAGGTTATTAGAAAT
GGCTTAAGAGTAAGTGATTTAAGGCATATGGACACATTCCCCCAAAAGCTTGATCTTTTA
TTATCAGATGCCGCCGCAAGATTCCCAGGCTTTAAGTATGGTCCTGACATGCTCAGGGAA
GAAGTGGAACGCTATAAGAAATTTGCTGAGAGGTTGGAACCCTTTGTTGCAGATACTGTG
CACTTCATGAATGATGCTATATCTCAGAAAAAGAAGATTTTGGTGGAAGGTGGTCAGGCA
ACAATGTTGGATATTGATTTTGGAACATACCCTTTTGTGACTTCATCCAGTCCATCGGCT
GGTGGAATCTGCACAGGTCTTGGCATTGCTCCCAGAGTTGTTGGTGATCTTGTTGGTGTG
GTTAAGGCATATACCACAAGAGTTGGTTCTGGTCCTTTTCCAACAGAAATCATGGGCAAA
GGTGGTGACCTTCTTCGTTTTGCTGGGCAGGAGTTTGGCACAACTACTGGACGTCCGCGT
CGCTGTGGTTGGCTAGACATAGTTGCACTGAGATTCTGCTGTCAAATAAATGGATTTGCT
TCTCTTAACCTAACAAAACTAGATGTGCTGTCAGATCTACCAGAAATTCAATTGGGTGTT
ACTTACAGGCATCCTGATGGCTCAGCATTAAATTCTTTTCCCTCTGATCTTCGTCTTCTT
GAGCAAATAAAGGTGGAGTATGAAGTTTTGCCTGGGTGGAAGAGTGATATTTCTTCCATC
AGGAAGTATACTGACTTGCCTAAGGCTGCACGTGAGTATGTAGAAAGGATAGAGGAGCTT
GTTGGGGTCCCTATCCATTACATTGGTATAGGACCTGGCCGTGATGCCCTTATCTACAAG
TGA