Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032958
CDS Infomation

pacid=37428938 polypeptide=PGSC0003DMP400022422 locus=PGSC0003DMG400012658 ID=PGSC0003DMT400032958.v4.03 annot-version=v4.03
Sequence

ATGGGTAGCTCAAAACAACCACTTCATATTGGTATACTCTCAAGTCCAGGCTTAGGCCAC
ATCATCCCTGTAGTAACCCTCGCCAACCGCCTCGCCACCTTCCATAACGTCTCTGTCACT
GTTTTTGTTATCACCTCCGGCAGCTCTCTGGCTGAAACTGAGATTCTCAAATCGGCCAAT
AAATCGAAGATGATTGATGTAGTTGAAATACCAGGTGTAGATATATCCAACCTTATTGAT
TCCAACACAAAAATAGTCACTCAACTTTGCATACTTATACGTGAAACGTTGCATGTTGTT
AAGTCCGTGATATCTGCAATGAAGCATCTTCTGGACGCTCTCATTGTTGATATTTTCACT
ACTGAAGCCTTGCCAATTGCCAAAGAATTTGAATTACCTAATTATGTTTATATTCCAACG
AATGCATGGTTTACTGCTATGACTGTCTACTGTCCGTTCCTTGACAAAGAAATTGAGGGT
CAATATGTAGATCAGAAGGAGCCGTTGAAAATCCCAGGTTGCAAACCGGTTCGACCGGAA
GACGTCAACGATCCAATGCTGGACCGCAACGAACAGGATTATCGCGAGTACTTGAAAGTA
CATGGGATCGGGTTCTGTTTGTCGGATGGGATCTTGATGAACACTTGGGAAGACGCGGAG
ACCGGTTCACTCAAAGCGTTAAGAGAAAATGATATATTAAAAGCTATCGTGAAGTCACCG
GTTTATCCGGTTGGACCGTTGATTAGACATGACCAACAAATCATTGATGGCCGGAGTGGA
GATGATGATGGTAACAATTCTGTCCTAAATTGGTTGGACAAACAAATTCCTAATTCAGTG
CTATACATATCTTTCGGGAGTGGTGGGACCCTCTCGTCAAAACAGTTAACTGAGTTAGCT
TTTGGACTAGAGTTAAGTCATCAGAAGTTCATTTGGGTGGTGAGGCCACCGTCAGAGGTC
GGTGCAGACAAGTCATTTTTCACAACTGGAAATCGGGGCGACAACACTCCTGAGTACTTG
CCTGAAGGTTTTCTAACACGGACCAAAGATTTTGGATTGGTGATTCAGATGTGGACGGAC
CAAACAAGAATTTTGAGCCACCCATCAGTTGGGGGATTTTTGACCCACTGTGGATGGAAT
TCTAGCATTGAGAGTATAACAAATGGTTTGCCAATGATTGCGTGGCCATTATATGCTGAA
CAGAGACAAAATGCCACTATGCTTACGGAGGAACTTAGAGTGGCTGTTAGGCCAAAGGTA
TTGCCAACAAAGAAAGTGGTGGAAAGGGAAGAAATAGAGCAATTGGTGAGAATGGTAATG
CAATATAAAGATGGAAAGGAATTGAAGGAAAATGTGAAGAAACTGAAGATGAGTGCAGAG
AAAGCACTAAGTGTAGGAGGCTCCTCTCATGATTCAATGTGTCAAGTCCTCAAAGACATT
GAGAAGAGATCAATCCATGGTTACAAGAACATTAATGTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400022422
PEP Infomation

pacid=37428938 transcript=PGSC0003DMT400032958 locus=PGSC0003DMG400012658 ID=PGSC0003DMT400032958.v4.03 annot-version=v4.03
Sequence

MGSSKQPLHIGILSSPGLGHIIPVVTLANRLATFHNVSVTVFVITSGSSLAETEILKSAN
KSKMIDVVEIPGVDISNLIDSNTKIVTQLCILIRETLHVVKSVISAMKHLLDALIVDIFT
TEALPIAKEFELPNYVYIPTNAWFTAMTVYCPFLDKEIEGQYVDQKEPLKIPGCKPVRPE
DVNDPMLDRNEQDYREYLKVHGIGFCLSDGILMNTWEDAETGSLKALRENDILKAIVKSP
VYPVGPLIRHDQQIIDGRSGDDDGNNSVLNWLDKQIPNSVLYISFGSGGTLSSKQLTELA
FGLELSHQKFIWVVRPPSEVGADKSFFTTGNRGDNTPEYLPEGFLTRTKDFGLVIQMWTD
QTRILSHPSVGGFLTHCGWNSSIESITNGLPMIAWPLYAEQRQNATMLTEELRVAVRPKV
LPTKKVVEREEIEQLVRMVMQYKDGKELKENVKKLKMSAEKALSVGGSSHDSMCQVLKDI
EKRSIHGYKNINV*

Transcript Sequence

Transcript ID

PGSC0003DMT400032958
Transcript Infomation

pacid=37428938 locus=PGSC0003DMG400012658 ID=PGSC0003DMT400032958.v4.03 annot-version=v4.03
Sequence

ATGGGTAGCTCAAAACAACCACTTCATATTGGTATACTCTCAAGTCCAGGCTTAGGCCAC
ATCATCCCTGTAGTAACCCTCGCCAACCGCCTCGCCACCTTCCATAACGTCTCTGTCACT
GTTTTTGTTATCACCTCCGGCAGCTCTCTGGCTGAAACTGAGATTCTCAAATCGGCCAAT
AAATCGAAGATGATTGATGTAGTTGAAATACCAGGTGTAGATATATCCAACCTTATTGAT
TCCAACACAAAAATAGTCACTCAACTTTGCATACTTATACGTGAAACGTTGCATGTTGTT
AAGTCCGTGATATCTGCAATGAAGCATCTTCTGGACGCTCTCATTGTTGATATTTTCACT
ACTGAAGCCTTGCCAATTGCCAAAGAATTTGAATTACCTAATTATGTTTATATTCCAACG
AATGCATGGTTTACTGCTATGACTGTCTACTGTCCGTTCCTTGACAAAGAAATTGAGGGT
CAATATGTAGATCAGAAGGAGCCGTTGAAAATCCCAGGTTGCAAACCGGTTCGACCGGAA
GACGTCAACGATCCAATGCTGGACCGCAACGAACAGGATTATCGCGAGTACTTGAAAGTA
CATGGGATCGGGTTCTGTTTGTCGGATGGGATCTTGATGAACACTTGGGAAGACGCGGAG
ACCGGTTCACTCAAAGCGTTAAGAGAAAATGATATATTAAAAGCTATCGTGAAGTCACCG
GTTTATCCGGTTGGACCGTTGATTAGACATGACCAACAAATCATTGATGGCCGGAGTGGA
GATGATGATGGTAACAATTCTGTCCTAAATTGGTTGGACAAACAAATTCCTAATTCAGTG
CTATACATATCTTTCGGGAGTGGTGGGACCCTCTCGTCAAAACAGTTAACTGAGTTAGCT
TTTGGACTAGAGTTAAGTCATCAGAAGTTCATTTGGGTGGTGAGGCCACCGTCAGAGGTC
GGTGCAGACAAGTCATTTTTCACAACTGGAAATCGGGGCGACAACACTCCTGAGTACTTG
CCTGAAGGTTTTCTAACACGGACCAAAGATTTTGGATTGGTGATTCAGATGTGGACGGAC
CAAACAAGAATTTTGAGCCACCCATCAGTTGGGGGATTTTTGACCCACTGTGGATGGAAT
TCTAGCATTGAGAGTATAACAAATGGTTTGCCAATGATTGCGTGGCCATTATATGCTGAA
CAGAGACAAAATGCCACTATGCTTACGGAGGAACTTAGAGTGGCTGTTAGGCCAAAGGTA
TTGCCAACAAAGAAAGTGGTGGAAAGGGAAGAAATAGAGCAATTGGTGAGAATGGTAATG
CAATATAAAGATGGAAAGGAATTGAAGGAAAATGTGAAGAAACTGAAGATGAGTGCAGAG
AAAGCACTAAGTGTAGGAGGCTCCTCTCATGATTCAATGTGTCAAGTCCTCAAAGACATT
GAGAAGAGATCAATCCATGGTTACAAGAACATTAATGTGTGA