Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032879
CDS Infomation

pacid=37424797 polypeptide=PGSC0003DMP400022374 locus=PGSC0003DMG400012630 ID=PGSC0003DMT400032879.v4.03 annot-version=v4.03
Sequence

ATGGACGCCTTCAAGCATCAGTCGTTCTTCCAAGATATCAAATCAAGGGAGGTTCATGGA
TACAGAGTTAAAAGACGACCTTACATCAGTCACGAATTGTCTAATTTCAATCAAATTGGA
GCCGTAGCAGTTGACCACAACGGGTTCACGCCACCTCCAATGGCCCTATCTTTCTGCAAG
ACAAGTAAAAACTCACATATTGTTGCTGTCACTGACGAGGGTGGCTACCTTAGCTTGTTT
AACACCCGGGTGCAATTTCCTTCTTCTTCTACTCACCTGCAAAATGCAGAAAAAGCTAAG
GTATCAGAGTGGGTTGCTCATGATAATGCCATATTTGATGTATGTTGGATCAAGGAAGAT
ACCAATATCTTAACAGCTTCAGGTGATCAAAGTATAAAGGTATGGGATGCACAAGGAAAT
CAATGTGTGAGAGCACTAATGGGTCACACTGGGAGTGTAAAATCGATTTGTCCTCATCCT
ACAAATCATGATATTATTGTTTCTGGTTCTAGAGATGGGTCATTTGCACTCTGGGACTTG
AGGTGCTCTGACAGTAGCAGTGAAAACTTTTGCATACCGTCAATTGCTACCGTCCATGAG
GCTCACATTTCTCCCTGTCAGAGGCGGACTAGACGTGGAAAGGCTTCCTCTGTGAGCATT
ACATCTATACTTTACCTTAAAGACGAGCTTTCCATAGCTAGTGCTGGAGCAGTTGACAGT
GTCATAAAGTTCTGGGATACAAGGAATCTCAAATGTCCTGTTGTTCAGGCATGCCCTCAT
CCTGATGTATCAACTCAGAAGGTACAACGATATCATGGAGTATCTAGTTTGTCTCAAGAT
TTAAATGGAGCGTTTATTTCTGCATCATGCATGGACAGCAGAATCTACCTCTACAATGTA
CTTCAGGCAGAAAAAGGGCCTGTTAAAACTTTCAAAGGATGCAAAATAGAATCATTTTTT
GTCAAGGCAGCTATAAGTCCTGATGCAGCTCATATTCTTAGTGGTTCCAGTGATGGAAAT
GGCTACGTTTGGCAGGTAAACAAACCTCTTGAAGATCCAATTATGTTGAAAGGCCATGAT
GGAGAAGTTACAGCTCTAGATTGGTGCACATCAGAAACAGGCAAAGTTGCTACGTCATCA
GATGATTTCACAGTGCGGTTTTGGAACATCCACAACAGTTGTTACTCAAACACACGATCT
CCATCATCCATTCGAAGGAGAGTAACAGCACTTTCATGCATGCAACGCCGGAAGCTGTTT
TCAGATGAAAAACCAGCCAGCATCAAGAATGTCTCTGCTGGCATTGACTCAAACTTGACA
TGTCATCAAGACTTGCCTGATCCTATCACAGTCCCTGAAATGAGCACTCCAATATCAAAG
AAGAGAAAAGCTTTACCAAGTGTTGAACCTCAAGAAAACTTTGAGAAAACCCCAGAAGCT
GCCAAGAGAAGTCCTTCATCTGTTCTGAACCCCCCTTCCTCTTTGAGGAAGACAATCAGA
GATTACTTTTTAGTCACTCCTCCTTCAGGTTTACACAGTAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400022374
PEP Infomation

pacid=37424797 transcript=PGSC0003DMT400032879 locus=PGSC0003DMG400012630 ID=PGSC0003DMT400032879.v4.03 annot-version=v4.03
Sequence

MDAFKHQSFFQDIKSREVHGYRVKRRPYISHELSNFNQIGAVAVDHNGFTPPPMALSFCK
TSKNSHIVAVTDEGGYLSLFNTRVQFPSSSTHLQNAEKAKVSEWVAHDNAIFDVCWIKED
TNILTASGDQSIKVWDAQGNQCVRALMGHTGSVKSICPHPTNHDIIVSGSRDGSFALWDL
RCSDSSSENFCIPSIATVHEAHISPCQRRTRRGKASSVSITSILYLKDELSIASAGAVDS
VIKFWDTRNLKCPVVQACPHPDVSTQKVQRYHGVSSLSQDLNGAFISASCMDSRIYLYNV
LQAEKGPVKTFKGCKIESFFVKAAISPDAAHILSGSSDGNGYVWQVNKPLEDPIMLKGHD
GEVTALDWCTSETGKVATSSDDFTVRFWNIHNSCYSNTRSPSSIRRRVTALSCMQRRKLF
SDEKPASIKNVSAGIDSNLTCHQDLPDPITVPEMSTPISKKRKALPSVEPQENFEKTPEA
AKRSPSSVLNPPSSLRKTIRDYFLVTPPSGLHSK*

Transcript Sequence

Transcript ID

PGSC0003DMT400032879
Transcript Infomation

pacid=37424797 locus=PGSC0003DMG400012630 ID=PGSC0003DMT400032879.v4.03 annot-version=v4.03
Sequence

ATGGACGCCTTCAAGCATCAGTCGTTCTTCCAAGATATCAAATCAAGGGAGGTTCATGGA
TACAGAGTTAAAAGACGACCTTACATCAGTCACGAATTGTCTAATTTCAATCAAATTGGA
GCCGTAGCAGTTGACCACAACGGGTTCACGCCACCTCCAATGGCCCTATCTTTCTGCAAG
ACAAGTAAAAACTCACATATTGTTGCTGTCACTGACGAGGGTGGCTACCTTAGCTTGTTT
AACACCCGGGTGCAATTTCCTTCTTCTTCTACTCACCTGCAAAATGCAGAAAAAGCTAAG
GTATCAGAGTGGGTTGCTCATGATAATGCCATATTTGATGTATGTTGGATCAAGGAAGAT
ACCAATATCTTAACAGCTTCAGGTGATCAAAGTATAAAGGTATGGGATGCACAAGGAAAT
CAATGTGTGAGAGCACTAATGGGTCACACTGGGAGTGTAAAATCGATTTGTCCTCATCCT
ACAAATCATGATATTATTGTTTCTGGTTCTAGAGATGGGTCATTTGCACTCTGGGACTTG
AGGTGCTCTGACAGTAGCAGTGAAAACTTTTGCATACCGTCAATTGCTACCGTCCATGAG
GCTCACATTTCTCCCTGTCAGAGGCGGACTAGACGTGGAAAGGCTTCCTCTGTGAGCATT
ACATCTATACTTTACCTTAAAGACGAGCTTTCCATAGCTAGTGCTGGAGCAGTTGACAGT
GTCATAAAGTTCTGGGATACAAGGAATCTCAAATGTCCTGTTGTTCAGGCATGCCCTCAT
CCTGATGTATCAACTCAGAAGGTACAACGATATCATGGAGTATCTAGTTTGTCTCAAGAT
TTAAATGGAGCGTTTATTTCTGCATCATGCATGGACAGCAGAATCTACCTCTACAATGTA
CTTCAGGCAGAAAAAGGGCCTGTTAAAACTTTCAAAGGATGCAAAATAGAATCATTTTTT
GTCAAGGCAGCTATAAGTCCTGATGCAGCTCATATTCTTAGTGGTTCCAGTGATGGAAAT
GGCTACGTTTGGCAGGTAAACAAACCTCTTGAAGATCCAATTATGTTGAAAGGCCATGAT
GGAGAAGTTACAGCTCTAGATTGGTGCACATCAGAAACAGGCAAAGTTGCTACGTCATCA
GATGATTTCACAGTGCGGTTTTGGAACATCCACAACAGTTGTTACTCAAACACACGATCT
CCATCATCCATTCGAAGGAGAGTAACAGCACTTTCATGCATGCAACGCCGGAAGCTGTTT
TCAGATGAAAAACCAGCCAGCATCAAGAATGTCTCTGCTGGCATTGACTCAAACTTGACA
TGTCATCAAGACTTGCCTGATCCTATCACAGTCCCTGAAATGAGCACTCCAATATCAAAG
AAGAGAAAAGCTTTACCAAGTGTTGAACCTCAAGAAAACTTTGAGAAAACCCCAGAAGCT
GCCAAGAGAAGTCCTTCATCTGTTCTGAACCCCCCTTCCTCTTTGAGGAAGACAATCAGA
GATTACTTTTTAGTCACTCCTCCTTCAGGTTTACACAGTAAATGA