Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032855
CDS Infomation

pacid=37427839 polypeptide=PGSC0003DMP400022356 locus=PGSC0003DMG400012621 ID=PGSC0003DMT400032855.v4.03 annot-version=v4.03
Sequence

ATGGAACCTCCAAGGGGGGTTTTTACTTCTGTGTGGAACTTCATTCGTTTCTTACCTTAC
TTCATTGGCCTGCTTATTTTGGGTGTCTTGAAAGGTGTCATTGTGTTCCCTATCGTCCTT
ATTATACTCACTGTCGGAAACTGTTCCCTTATTTTGGGTCTTTGGCCAGTGCACCTGTTC
TATACATTTTACTGTATATGGAGCACAAAGCAACTTGGTCCAGCTTTAAAATTTGTGATA
AGCATATGTGCCCTTGTTATTTTATATTTATGGCCGTTCATTGCAATTGCAACTAGCATT
ATTGGCGGGGCTGCTTATGGCTTCCTTTCACCAGTGTTTGCCACTTTCCAAGCTGTGGAT
GGAAGGACGACTAATGCCTTCTATCACAGTATATATGATGGGACCTGGGACACGGTGAAA
GGAAGCTTAACCATTGTTAGGGATTTCAAGGATGTCTTATACCATTCCTATTTCTCAATC
ATGGATGATTGGCGACTTCAAGGACCTTCTGATGGAAAATACTACGAGATCAGGGTGCTT
TATATTCCTTTGGCGCTAATAGCTGTGGAACTAGGACTCGTGGTTGACATTCCAATGATC
ATGCTAATTGCTGCTTGCAAATTCCCTTACATGCTTTACAAAGGGTGGCGTCGTTTATTT
CATGATTGTATAGGCCGAGAAGGGCCTTTTCTTGAGACAATCTGTGTGCCATTTGCTGGC
CTTGCTATCTTACTCTGGCCAATGGCTGTTATTGCTGCATTCTTTGGATCAATATTAGCA
AGTGTCCCTCTAGGCGCTTATGCAGGAGTAGTTGTATATCAGGAGTGTTCTCTTTGGTCA
GGGCTTTGCTATATCGTTGCTTCCTTGTCCTTATATGATGAATATAGCAATGATGTGCTG
GACATGCCAGAAGGGTCCTGCTTTCCTAGGCCTCAGTACAGAAAGAAGACTGCATCAAGG
ACCAACTCTCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAAAAATCCACCATCTAGT
ACAAACGCCATCAATGTCCCCATACTTGAGTTGATACCCCTCGAGCTTCTTGATGGCTTA
TTCAAGGGCTGTCAATATCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAA
GACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCT
GCCTATTGCATCCTTCACACCCTTATACGTTCTGCAAAAGCCAACAGTGCTGGTATTTTG
TTAAATGATGACGGCACTGAATTAACTAGCACGAACAGGCCCAGAGATACCTTCTCTGAG
TGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGCAAATCTTTCTGAC
AGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCTGAGAGGTTGAGG
GATTTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGCTTGAGGCGTTG
GCTCGAAGGCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGC
TTTGAGAGTAGCATCAAGATTATCTTAGAAGAACTTGTCAAGAAGAATGGTGATAGTAGA
AAATCAGAAGATGATGGAACTCAGAGAATTCCCAGGTCAAAAAGCATGTTTGTTCGTATG
TTTAGCGAGAACTCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTA
GATACTGATAGAGATGTTGAAATTCAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400022356
PEP Infomation

pacid=37427839 transcript=PGSC0003DMT400032855 locus=PGSC0003DMG400012621 ID=PGSC0003DMT400032855.v4.03 annot-version=v4.03
Sequence

MEPPRGVFTSVWNFIRFLPYFIGLLILGVLKGVIVFPIVLIILTVGNCSLILGLWPVHLF
YTFYCIWSTKQLGPALKFVISICALVILYLWPFIAIATSIIGGAAYGFLSPVFATFQAVD
GRTTNAFYHSIYDGTWDTVKGSLTIVRDFKDVLYHSYFSIMDDWRLQGPSDGKYYEIRVL
YIPLALIAVELGLVVDIPMIMLIAACKFPYMLYKGWRRLFHDCIGREGPFLETICVPFAG
LAILLWPMAVIAAFFGSILASVPLGAYAGVVVYQECSLWSGLCYIVASLSLYDEYSNDVL
DMPEGSCFPRPQYRKKTASRTNSRADSLSRPDSFKNPPSSTNAINVPILELIPLELLDGL
FKGCQYHGEIMVSQGVITQKDIEDAKSSKDSGQVISIGLPAYCILHTLIRSAKANSAGIL
LNDDGTELTSTNRPRDTFSEWFFNPLLIIKDQIKAANLSDSDEEYLGKLVLLSGDPERLR
DLNIGSPPESELRRAELEALARRLRGITKSISRFPTFKRRFESSIKIILEELVKKNGDSR
KSEDDGTQRIPRSKSMFVRMFSENSFKNRNGKSDQEAQLVDTDRDVEIQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400032855
Transcript Infomation

pacid=37427839 locus=PGSC0003DMG400012621 ID=PGSC0003DMT400032855.v4.03 annot-version=v4.03
Sequence

ATGGAACCTCCAAGGGGGGTTTTTACTTCTGTGTGGAACTTCATTCGTTTCTTACCTTAC
TTCATTGGCCTGCTTATTTTGGGTGTCTTGAAAGGTGTCATTGTGTTCCCTATCGTCCTT
ATTATACTCACTGTCGGAAACTGTTCCCTTATTTTGGGTCTTTGGCCAGTGCACCTGTTC
TATACATTTTACTGTATATGGAGCACAAAGCAACTTGGTCCAGCTTTAAAATTTGTGATA
AGCATATGTGCCCTTGTTATTTTATATTTATGGCCGTTCATTGCAATTGCAACTAGCATT
ATTGGCGGGGCTGCTTATGGCTTCCTTTCACCAGTGTTTGCCACTTTCCAAGCTGTGGAT
GGAAGGACGACTAATGCCTTCTATCACAGTATATATGATGGGACCTGGGACACGGTGAAA
GGAAGCTTAACCATTGTTAGGGATTTCAAGGATGTCTTATACCATTCCTATTTCTCAATC
ATGGATGATTGGCGACTTCAAGGACCTTCTGATGGAAAATACTACGAGATCAGGGTGCTT
TATATTCCTTTGGCGCTAATAGCTGTGGAACTAGGACTCGTGGTTGACATTCCAATGATC
ATGCTAATTGCTGCTTGCAAATTCCCTTACATGCTTTACAAAGGGTGGCGTCGTTTATTT
CATGATTGTATAGGCCGAGAAGGGCCTTTTCTTGAGACAATCTGTGTGCCATTTGCTGGC
CTTGCTATCTTACTCTGGCCAATGGCTGTTATTGCTGCATTCTTTGGATCAATATTAGCA
AGTGTCCCTCTAGGCGCTTATGCAGGAGTAGTTGTATATCAGGAGTGTTCTCTTTGGTCA
GGGCTTTGCTATATCGTTGCTTCCTTGTCCTTATATGATGAATATAGCAATGATGTGCTG
GACATGCCAGAAGGGTCCTGCTTTCCTAGGCCTCAGTACAGAAAGAAGACTGCATCAAGG
ACCAACTCTCGTGCAGATTCTTTATCAAGGCCTGATTCTTTCAAAAATCCACCATCTAGT
ACAAACGCCATCAATGTCCCCATACTTGAGTTGATACCCCTCGAGCTTCTTGATGGCTTA
TTCAAGGGCTGTCAATATCATGGCGAAATCATGGTATCTCAAGGAGTAATTACACAAAAA
GACATTGAAGATGCCAAATCTAGTAAAGACAGTGGTCAAGTCATTAGCATTGGTTTGCCT
GCCTATTGCATCCTTCACACCCTTATACGTTCTGCAAAAGCCAACAGTGCTGGTATTTTG
TTAAATGATGACGGCACTGAATTAACTAGCACGAACAGGCCCAGAGATACCTTCTCTGAG
TGGTTTTTCAATCCACTCTTGATCATCAAAGACCAGATCAAAGCCGCAAATCTTTCTGAC
AGCGACGAGGAGTACCTTGGCAAATTGGTTTTGTTGAGTGGTGATCCTGAGAGGTTGAGG
GATTTAAATATTGGATCACCACCTGAATCTGAACTGAGGCGAGCTGAGCTTGAGGCGTTG
GCTCGAAGGCTACGAGGCATCACCAAATCTATATCAAGATTTCCAACATTCAAGCGCCGC
TTTGAGAGTAGCATCAAGATTATCTTAGAAGAACTTGTCAAGAAGAATGGTGATAGTAGA
AAATCAGAAGATGATGGAACTCAGAGAATTCCCAGGTCAAAAAGCATGTTTGTTCGTATG
TTTAGCGAGAACTCTTTCAAGAATAGAAATGGCAAGAGTGATCAAGAGGCTCAACTGGTA
GATACTGATAGAGATGTTGAAATTCAATGA