Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032853
CDS Infomation

pacid=37429068 polypeptide=PGSC0003DMP400022354 locus=PGSC0003DMG400012620 ID=PGSC0003DMT400032853.v4.03 annot-version=v4.03
Sequence

ATGCCTTATCTAAATGTCTGGTCTTCAAGAACAAACTGCCTTATCTCTGAACAGGAGTTG
GCTTCATCTTCTACTTCAGTTTTTACATGGCGGAGAACTGAAAGTTTGGTTCTTGCATAC
TCTCTGCCACATAATTCTACCTCTGATCATGTATCTACAAGGAATAAACCTAAGTTTAGA
AATCAAGATTTTTGTTTGAGAACAGAATTCGTTCCTTTTCGCCCCCAAAAGAAGGATTCT
TTTGCTTTGACACAAGCATCTGAAGAGAAAGATATTCATTGTGATGTAGTAAAACAAAAT
TCACAATCTTTCACTAGTGGGGAAGGTGGGGTTGAGGGTTTCACATGTGTTCAATTGGAG
GAAAAGGGGAACTTGACTAATAATATTGAGTATGACGATGATGGTGATGTTGGAAATGAG
GAGGATGAGGCAGGGAGAGTAAAAGGCGAGAAGGTGGACGTTCGAGCTCTGGCACAGAGC
TTGCACTTTGTCAAAACTGCAGATGAGGTAGATGAAGTTCTTAAGGATAAGATTGAATTA
CCCCTTCAAGTTTACTCATCTATGATTAGAGGTTTTGGTAAAGATAAGAAGCTGAACTCT
GCTATGGCACTTGTTGAGTGGTTAAGGAGGAGGAGCAAGGATAATATTGGCTCTATTAGC
TTAAATGTGTTCATTTATAACAGTCTTTTAGGCGCCATAAAAGAGGCGGGGAAGTATGAT
TTTGTTGATAAAGTCATGGATGATATGGTCTCAGAAGGAGTGCAGCCTAATGTTGTGACG
TACAATACTTTAATGAGAATTTATATAGAACAAGGTCGGGAACTTGAAGCTCTCAATCTT
TTCAGGTTGATGCCAAAGAAGGGACTCTCTCCTAGTCCTGCATCCTATTCCACTGCCTTG
TTTGCTTATCGGAGACTTGAAGATGGATTTGGTGCTATAACTTTCTTTGTCGAGACACGA
GAGAAATATCAAAATGGTGAAATAGGAAACATTGAGGAAGAAAACTGGGAGGATGAATTT
GCCAAGCTTGAGAATTTCATAGTTCGAATTTGCTACCAGGTGATGCGGCAGTGGCTGGTA
AAGGGGGAAAATGCAAACACCAATGTTCTGAAACTACTAACGGATATGGATAGGGCTAGG
CTCCAACTAAGTCGTGCAGAATATGAACGTCTAGTGTGGGCATGTACTCGTGAAGAACAT
CATGTTGTTGCAAAAGAACTGTATAATAGGATAAGAGAGAGGGATACAGAGATTAGCCTA
TCCGTTTGCAACCATATTATTTGGTTGATGGGTAAGGCGAAAAAATGGTGGGCAGCTCTT
GAAATTTATGAGGATTTGTTGGATAAGGGGCCTAAACCAAACAACATGTCATATGAACTG
ATAGTTTCTCATTTTAACATACTGCTGAGTGCAGCCAGAAAAAGAGGTATTTGGCGATGG
GGTGTTAGGTTGCTGAATAAAATGGAAGAGAAGGGGCTTAAACCAAGCAGTAGGGAATGG
AATGCCGTCCTTGTTGCCTGCTCCAAGGCTTCGGAAACATCTGCTGCAGTGCAAATATTT
AGGAGAATGGTAGAGAAAGGTGAAAAACCGACAGTTATCTCCTATGGAGCGTTGCTCAGT
GCACTAGAGAAAGGCAAGCTCTATGATGAAGCCCTTCAGGTTTGGAAACATATGATCAAA
GTGGGCATCGAGCCAAATTTGTATGCCTATACTATTATGGCATCAATTTACACTGCTCAA
GGGAAATTTAACATAGTTGATTCTATCATCAAGGAGATGGTTACTACTGGAGTTGAGCCT
ACAGTTGTTACATTCAACGCTATTATCAGTGGATGTGCTCGGAACGGTATGGAAAGTGTT
GCGTACGAGTGGTTTCAGCGTATGAAAACTCAAAACATAACCCCCAATGAGGTTAGCTAT
GAAATGCTAATTGAGGCTCTTGCGAATGATGGCAAGCCGAGGCTAGCATATGAGTTGTAT
GTGAGAGCTCTAACTGAAGGCCTGAGTCTTTCTACAAAGGCTTATGATGCAGTCATCTCG
TCTACACAGGCATATGGTGCAAGTATTGATCTAAGCATTCTTGGCCCCCGCCCACCAGAA
AAAAAGAAAAGAGTGCAAATCAGGAAAAGCTTGTCTGAATTCTGTAATATAGCCGATGTT
CCTAGAAGAAGCAGGCCCTTTGACAGGGAAGAAATTTTTACTGCTCAGACAAACGAAACA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400022354
PEP Infomation

pacid=37429068 transcript=PGSC0003DMT400032853 locus=PGSC0003DMG400012620 ID=PGSC0003DMT400032853.v4.03 annot-version=v4.03
Sequence

MPYLNVWSSRTNCLISEQELASSSTSVFTWRRTESLVLAYSLPHNSTSDHVSTRNKPKFR
NQDFCLRTEFVPFRPQKKDSFALTQASEEKDIHCDVVKQNSQSFTSGEGGVEGFTCVQLE
EKGNLTNNIEYDDDGDVGNEEDEAGRVKGEKVDVRALAQSLHFVKTADEVDEVLKDKIEL
PLQVYSSMIRGFGKDKKLNSAMALVEWLRRRSKDNIGSISLNVFIYNSLLGAIKEAGKYD
FVDKVMDDMVSEGVQPNVVTYNTLMRIYIEQGRELEALNLFRLMPKKGLSPSPASYSTAL
FAYRRLEDGFGAITFFVETREKYQNGEIGNIEEENWEDEFAKLENFIVRICYQVMRQWLV
KGENANTNVLKLLTDMDRARLQLSRAEYERLVWACTREEHHVVAKELYNRIRERDTEISL
SVCNHIIWLMGKAKKWWAALEIYEDLLDKGPKPNNMSYELIVSHFNILLSAARKRGIWRW
GVRLLNKMEEKGLKPSSREWNAVLVACSKASETSAAVQIFRRMVEKGEKPTVISYGALLS
ALEKGKLYDEALQVWKHMIKVGIEPNLYAYTIMASIYTAQGKFNIVDSIIKEMVTTGVEP
TVVTFNAIISGCARNGMESVAYEWFQRMKTQNITPNEVSYEMLIEALANDGKPRLAYELY
VRALTEGLSLSTKAYDAVISSTQAYGASIDLSILGPRPPEKKKRVQIRKSLSEFCNIADV
PRRSRPFDREEIFTAQTNET*

Transcript Sequence

Transcript ID

PGSC0003DMT400032853
Transcript Infomation

pacid=37429068 locus=PGSC0003DMG400012620 ID=PGSC0003DMT400032853.v4.03 annot-version=v4.03
Sequence

ATGCCTTATCTAAATGTCTGGTCTTCAAGAACAAACTGCCTTATCTCTGAACAGGAGTTG
GCTTCATCTTCTACTTCAGTTTTTACATGGCGGAGAACTGAAAGTTTGGTTCTTGCATAC
TCTCTGCCACATAATTCTACCTCTGATCATGTATCTACAAGGAATAAACCTAAGTTTAGA
AATCAAGATTTTTGTTTGAGAACAGAATTCGTTCCTTTTCGCCCCCAAAAGAAGGATTCT
TTTGCTTTGACACAAGCATCTGAAGAGAAAGATATTCATTGTGATGTAGTAAAACAAAAT
TCACAATCTTTCACTAGTGGGGAAGGTGGGGTTGAGGGTTTCACATGTGTTCAATTGGAG
GAAAAGGGGAACTTGACTAATAATATTGAGTATGACGATGATGGTGATGTTGGAAATGAG
GAGGATGAGGCAGGGAGAGTAAAAGGCGAGAAGGTGGACGTTCGAGCTCTGGCACAGAGC
TTGCACTTTGTCAAAACTGCAGATGAGGTAGATGAAGTTCTTAAGGATAAGATTGAATTA
CCCCTTCAAGTTTACTCATCTATGATTAGAGGTTTTGGTAAAGATAAGAAGCTGAACTCT
GCTATGGCACTTGTTGAGTGGTTAAGGAGGAGGAGCAAGGATAATATTGGCTCTATTAGC
TTAAATGTGTTCATTTATAACAGTCTTTTAGGCGCCATAAAAGAGGCGGGGAAGTATGAT
TTTGTTGATAAAGTCATGGATGATATGGTCTCAGAAGGAGTGCAGCCTAATGTTGTGACG
TACAATACTTTAATGAGAATTTATATAGAACAAGGTCGGGAACTTGAAGCTCTCAATCTT
TTCAGGTTGATGCCAAAGAAGGGACTCTCTCCTAGTCCTGCATCCTATTCCACTGCCTTG
TTTGCTTATCGGAGACTTGAAGATGGATTTGGTGCTATAACTTTCTTTGTCGAGACACGA
GAGAAATATCAAAATGGTGAAATAGGAAACATTGAGGAAGAAAACTGGGAGGATGAATTT
GCCAAGCTTGAGAATTTCATAGTTCGAATTTGCTACCAGGTGATGCGGCAGTGGCTGGTA
AAGGGGGAAAATGCAAACACCAATGTTCTGAAACTACTAACGGATATGGATAGGGCTAGG
CTCCAACTAAGTCGTGCAGAATATGAACGTCTAGTGTGGGCATGTACTCGTGAAGAACAT
CATGTTGTTGCAAAAGAACTGTATAATAGGATAAGAGAGAGGGATACAGAGATTAGCCTA
TCCGTTTGCAACCATATTATTTGGTTGATGGGTAAGGCGAAAAAATGGTGGGCAGCTCTT
GAAATTTATGAGGATTTGTTGGATAAGGGGCCTAAACCAAACAACATGTCATATGAACTG
ATAGTTTCTCATTTTAACATACTGCTGAGTGCAGCCAGAAAAAGAGGTATTTGGCGATGG
GGTGTTAGGTTGCTGAATAAAATGGAAGAGAAGGGGCTTAAACCAAGCAGTAGGGAATGG
AATGCCGTCCTTGTTGCCTGCTCCAAGGCTTCGGAAACATCTGCTGCAGTGCAAATATTT
AGGAGAATGGTAGAGAAAGGTGAAAAACCGACAGTTATCTCCTATGGAGCGTTGCTCAGT
GCACTAGAGAAAGGCAAGCTCTATGATGAAGCCCTTCAGGTTTGGAAACATATGATCAAA
GTGGGCATCGAGCCAAATTTGTATGCCTATACTATTATGGCATCAATTTACACTGCTCAA
GGGAAATTTAACATAGTTGATTCTATCATCAAGGAGATGGTTACTACTGGAGTTGAGCCT
ACAGTTGTTACATTCAACGCTATTATCAGTGGATGTGCTCGGAACGGTATGGAAAGTGTT
GCGTACGAGTGGTTTCAGCGTATGAAAACTCAAAACATAACCCCCAATGAGGTTAGCTAT
GAAATGCTAATTGAGGCTCTTGCGAATGATGGCAAGCCGAGGCTAGCATATGAGTTGTAT
GTGAGAGCTCTAACTGAAGGCCTGAGTCTTTCTACAAAGGCTTATGATGCAGTCATCTCG
TCTACACAGGCATATGGTGCAAGTATTGATCTAAGCATTCTTGGCCCCCGCCCACCAGAA
AAAAAGAAAAGAGTGCAAATCAGGAAAAGCTTGTCTGAATTCTGTAATATAGCCGATGTT
CCTAGAAGAAGCAGGCCCTTTGACAGGGAAGAAATTTTTACTGCTCAGACAAACGAAACA
TGA