Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032842
CDS Infomation

pacid=37424334 polypeptide=PGSC0003DMP400022344 locus=PGSC0003DMG400012613 ID=PGSC0003DMT400032842.v4.03 annot-version=v4.03
Sequence

ATGGGTGGCAAGAGTTCAAGAGAGGATAGTTGGAGACAAGCTTCGTCGACTCGATCTTCT
TCTTGGAATCAATACGATTATCCTCAAACTGCTTATCCTCAAGATAGTTACAGTTATTCA
CAGCAGGCGGCTGTTCCTTCTTATGCACCACCACCACCATCCCAACAGAATTTTCCTCCT
CCACAGCCCCAACACAATTATGCTTCTCATGAACATGAATCTCTGCCTCATGCTCATGCT
CCACGACCAAGGCTTGACCGGAGATACTCGAGGATTGCAGACAATTATAATTCCCTGGAT
GAGGTGACTGAAGCCCTTGCACGAGCTGGCTTGGAGTCTTCGAATCTAATTGTGGGTATT
GATTTCACCAAGAGCAATGAATGGACAGGTAAGAGGTCTTTTGGTAATCGGAGCCTACAT
CACATTGGGCAGAATCTGAACCCATATGAGCAAGCCATTTCCATAATTGGAAAAACCTTA
GCGGCATTTGATGAGGATAACTTGATTCCTTGTTTTGGATTCGGAGATGCATCAACTCAT
GATCAAGATGTATTCAATTTCTTTCCCGATGAAAGATTTTGTAATGGTTTCGAGGAAGTT
CTGTCACGTTACAGAGAAATTGTCCCCCAGCTGAAGCTTGCAGGACCAACATCATTCGCC
CCGGTCATTGAAATGGCCATGACAATAGTTGAGCAGAGTGGAGGCCAGTACCATGTTCTA
TTAATCATTGCAGATGGGCAGGTAACTAGAAGTGTTGATACTGGCCGTGGACAATTAAGT
CCGCAGGAGCAGAAAACGGTGGATGCAATCGTACAAGCAAGCAAGTTTCCCTTGTCAATT
ATACTGGTTGGGGTTGGTGATGGGCCCTGGGATATGATGAAGGAATTTGATGATAATATT
CCTGCTAGGGACTTTGATAATTTCCAGTTCGTCAATTTCACGGAGATAATGGCCAAAAAT
GTGCCTCAATCTCGAAAGGAGACAGAGTTTGCGCTTTCAGCATTGATGGAAATTCCTCCA
CAATACAAAGCGACGATGGAACTTAACTTACTGGGTGGACAAAGTGGAAAATCTCCCAAT
AGGGTAGCTCTTCCTCCTCCTATGTATGGGGCAAGTTCTGTCGGTGGCTCAAAGACCTCA
CGTGCACCGAGTTTTCAGCAGCCTGCAAGCTCGTATTACGGTTATGGAAGCCCTGCAGAT
GCAGCACCACATTTTCAGCCGACTTCAAGTTCTTATTATGACAGTGCTCGCCCAGTTGAC
ACTGCTCCATCTGCTCCAAGTTCTCCCTACACTGCTCCCAGTTCTACATATGACAATCAG
GTTTGCCCCATTTGTCTTACTAACCCAAAAGACATGGCCTTCGGCTGTGGGCATCAGGTA
CCTTTTTCCCCTCTCATTGAGCAGGCCAGATGTTTTGAGGAAATTAGACCTTGTTGTGAC
TTAACAATATCGTGTTCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400022344
PEP Infomation

pacid=37424334 transcript=PGSC0003DMT400032842 locus=PGSC0003DMG400012613 ID=PGSC0003DMT400032842.v4.03 annot-version=v4.03
Sequence

MGGKSSREDSWRQASSTRSSSWNQYDYPQTAYPQDSYSYSQQAAVPSYAPPPPSQQNFPP
PQPQHNYASHEHESLPHAHAPRPRLDRRYSRIADNYNSLDEVTEALARAGLESSNLIVGI
DFTKSNEWTGKRSFGNRSLHHIGQNLNPYEQAISIIGKTLAAFDEDNLIPCFGFGDASTH
DQDVFNFFPDERFCNGFEEVLSRYREIVPQLKLAGPTSFAPVIEMAMTIVEQSGGQYHVL
LIIADGQVTRSVDTGRGQLSPQEQKTVDAIVQASKFPLSIILVGVGDGPWDMMKEFDDNI
PARDFDNFQFVNFTEIMAKNVPQSRKETEFALSALMEIPPQYKATMELNLLGGQSGKSPN
RVALPPPMYGASSVGGSKTSRAPSFQQPASSYYGYGSPADAAPHFQPTSSSYYDSARPVD
TAPSAPSSPYTAPSSTYDNQVCPICLTNPKDMAFGCGHQVPFSPLIEQARCFEEIRPCCD
LTISCS*

Transcript Sequence

Transcript ID

PGSC0003DMT400032842
Transcript Infomation

pacid=37424334 locus=PGSC0003DMG400012613 ID=PGSC0003DMT400032842.v4.03 annot-version=v4.03
Sequence

ATGGGTGGCAAGAGTTCAAGAGAGGATAGTTGGAGACAAGCTTCGTCGACTCGATCTTCT
TCTTGGAATCAATACGATTATCCTCAAACTGCTTATCCTCAAGATAGTTACAGTTATTCA
CAGCAGGCGGCTGTTCCTTCTTATGCACCACCACCACCATCCCAACAGAATTTTCCTCCT
CCACAGCCCCAACACAATTATGCTTCTCATGAACATGAATCTCTGCCTCATGCTCATGCT
CCACGACCAAGGCTTGACCGGAGATACTCGAGGATTGCAGACAATTATAATTCCCTGGAT
GAGGTGACTGAAGCCCTTGCACGAGCTGGCTTGGAGTCTTCGAATCTAATTGTGGGTATT
GATTTCACCAAGAGCAATGAATGGACAGGTAAGAGGTCTTTTGGTAATCGGAGCCTACAT
CACATTGGGCAGAATCTGAACCCATATGAGCAAGCCATTTCCATAATTGGAAAAACCTTA
GCGGCATTTGATGAGGATAACTTGATTCCTTGTTTTGGATTCGGAGATGCATCAACTCAT
GATCAAGATGTATTCAATTTCTTTCCCGATGAAAGATTTTGTAATGGTTTCGAGGAAGTT
CTGTCACGTTACAGAGAAATTGTCCCCCAGCTGAAGCTTGCAGGACCAACATCATTCGCC
CCGGTCATTGAAATGGCCATGACAATAGTTGAGCAGAGTGGAGGCCAGTACCATGTTCTA
TTAATCATTGCAGATGGGCAGGTAACTAGAAGTGTTGATACTGGCCGTGGACAATTAAGT
CCGCAGGAGCAGAAAACGGTGGATGCAATCGTACAAGCAAGCAAGTTTCCCTTGTCAATT
ATACTGGTTGGGGTTGGTGATGGGCCCTGGGATATGATGAAGGAATTTGATGATAATATT
CCTGCTAGGGACTTTGATAATTTCCAGTTCGTCAATTTCACGGAGATAATGGCCAAAAAT
GTGCCTCAATCTCGAAAGGAGACAGAGTTTGCGCTTTCAGCATTGATGGAAATTCCTCCA
CAATACAAAGCGACGATGGAACTTAACTTACTGGGTGGACAAAGTGGAAAATCTCCCAAT
AGGGTAGCTCTTCCTCCTCCTATGTATGGGGCAAGTTCTGTCGGTGGCTCAAAGACCTCA
CGTGCACCGAGTTTTCAGCAGCCTGCAAGCTCGTATTACGGTTATGGAAGCCCTGCAGAT
GCAGCACCACATTTTCAGCCGACTTCAAGTTCTTATTATGACAGTGCTCGCCCAGTTGAC
ACTGCTCCATCTGCTCCAAGTTCTCCCTACACTGCTCCCAGTTCTACATATGACAATCAG
GTTTGCCCCATTTGTCTTACTAACCCAAAAGACATGGCCTTCGGCTGTGGGCATCAGGTA
CCTTTTTCCCCTCTCATTGAGCAGGCCAGATGTTTTGAGGAAATTAGACCTTGTTGTGAC
TTAACAATATCGTGTTCCTGA