Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032834
CDS Infomation

pacid=37427866 polypeptide=PGSC0003DMP400022338 locus=PGSC0003DMG400012609 ID=PGSC0003DMT400032834.v4.03 annot-version=v4.03
Sequence

ATGGCTAAGTCAGTAGTAATTCCTCGCATGTCTCTCATCTTCCTCCGCTCCAAATCCATC
TCTTCATTCTCTCAGTCAGGCACCATCTTCTTTCCCTCAATGCTCAATTCCCTTTTGCTC
AAATCCCATTCACTTCACTTTTTCTCTACAACTTCAACCCCATACCCACTTCAATACGAA
ATGATAATCTCCCGCCCTGCAAACCCACCTTCACCAACCCTAAAATCTCGCCAACAACGC
TTCCTTCCCAATTCAAAACCTACTGATTCAGAAACCGAACCCGGTTCAGAACTTGGGTTC
GACGATTGGGTCGACAGAAAATTGAATTCGAAATCTTCTTCTCCACAAGCCGAACCGGAG
CCTGAAGAACCCAATTCGGGTATTATGAAAATGGATAAAGGGAAAAGGAAATATTACAAT
AAGAGAAGGAAAAGAATGTTTGGTGGGTCGGATTCGGAGGATGAGAATAACAGGGACAAG
GATAATGAGCTTGTTGAGTTGAAGCAGGAAGTTGTGGAGCTACCTACATTGCACAAGAAG
GAAGAAGAGTTGTACTTTTATGACAATTTTGCTTATCCTTGGGAGAAGGATAAGCATTAT
AAGATGGTATATCAATTGGAGAAGAAGTTTTTTCCCGATCAGGGTTTTGATAAGGCTTTT
CTTGATCCTGGGCAGTCGAATGAGAATGTAAAGAGGAGTAAAAAGAAATTGGGGAAGAAG
GAAAATATAATAGAAAAAGATATTGATGGTGGGGATGGTAAAAGTTTGATCTTTTTCGAA
GAGGAAGAAAAAAGTGTCAGCTCTGAAACTAAAGAGGAAGCTAAAGTTGATGTATCGGAA
AAGAAAGTGGAAGAGTTCTTCAAGTGTTTGAAGAAAGTTCCAAATAAGGAAAATGGTGTT
GCCAGTGCCGAGCCATTTCTAGCGACAAGGAGTACAGGGCTTCCTCCTAAATGGGATAGT
CCGGGTGGGACTGTTGTATTAGTGAACAAACCAAAAGGTTGGACTTCTTTTACTGTTTGT
GGAAAGTTGCGTCGCTTAACAAAAGTGAAAAAGGTTGGCCATGCTGGAACACTTGATCCT
ATGGCAACTGGCTTATTGATTGTATGTGTTGGTAGATCTACGAAGATCGTTGACAGCTAT
CAGGGTATGATGAAGGGCTACAGTGGAATCTTCCGTTTGGGAGAAGCCACCTCTACCTGG
GATGCAGATTCCCCGGTTATTCAACGAGATCCATGGGAGCATATCAAGGATGAGGACATA
AAGAAAACGGCAGCATCCTTTTTTGGAGAGATATGGCAAGTCCCTCCGATGTTCTCAGCA
ATCAAAGTTGGTGGTGAAAAGATGTATGATAAAGCAAGAAGAGGAGAAAGCATCGAACTT
GCACCGAGAAGGATTTCAATTTTCGAATTTGACGTGAAGCGGAGTTTAGATGACAGACAG
AATGTGATTTTCCGAGTAAGATGCTCAAAAGGTACCTATGTCCGATCACTTTGTGCAGAC
TTCGGGAAAGCTCTTGGCAGTTGTGCTCACTTGACAGCTCTGCGACGAGATTCAATTGGA
GAGTATACAGCGGATGATGCTTGGGAATTTCAAGAATTGGAAGAGGCAATCACCAAAGGA
TATTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400022338
PEP Infomation

pacid=37427866 transcript=PGSC0003DMT400032834 locus=PGSC0003DMG400012609 ID=PGSC0003DMT400032834.v4.03 annot-version=v4.03
Sequence

MAKSVVIPRMSLIFLRSKSISSFSQSGTIFFPSMLNSLLLKSHSLHFFSTTSTPYPLQYE
MIISRPANPPSPTLKSRQQRFLPNSKPTDSETEPGSELGFDDWVDRKLNSKSSSPQAEPE
PEEPNSGIMKMDKGKRKYYNKRRKRMFGGSDSEDENNRDKDNELVELKQEVVELPTLHKK
EEELYFYDNFAYPWEKDKHYKMVYQLEKKFFPDQGFDKAFLDPGQSNENVKRSKKKLGKK
ENIIEKDIDGGDGKSLIFFEEEEKSVSSETKEEAKVDVSEKKVEEFFKCLKKVPNKENGV
ASAEPFLATRSTGLPPKWDSPGGTVVLVNKPKGWTSFTVCGKLRRLTKVKKVGHAGTLDP
MATGLLIVCVGRSTKIVDSYQGMMKGYSGIFRLGEATSTWDADSPVIQRDPWEHIKDEDI
KKTAASFFGEIWQVPPMFSAIKVGGEKMYDKARRGESIELAPRRISIFEFDVKRSLDDRQ
NVIFRVRCSKGTYVRSLCADFGKALGSCAHLTALRRDSIGEYTADDAWEFQELEEAITKG
YL*

Transcript Sequence

Transcript ID

PGSC0003DMT400032834
Transcript Infomation

pacid=37427866 locus=PGSC0003DMG400012609 ID=PGSC0003DMT400032834.v4.03 annot-version=v4.03
Sequence

ATGGCTAAGTCAGTAGTAATTCCTCGCATGTCTCTCATCTTCCTCCGCTCCAAATCCATC
TCTTCATTCTCTCAGTCAGGCACCATCTTCTTTCCCTCAATGCTCAATTCCCTTTTGCTC
AAATCCCATTCACTTCACTTTTTCTCTACAACTTCAACCCCATACCCACTTCAATACGAA
ATGATAATCTCCCGCCCTGCAAACCCACCTTCACCAACCCTAAAATCTCGCCAACAACGC
TTCCTTCCCAATTCAAAACCTACTGATTCAGAAACCGAACCCGGTTCAGAACTTGGGTTC
GACGATTGGGTCGACAGAAAATTGAATTCGAAATCTTCTTCTCCACAAGCCGAACCGGAG
CCTGAAGAACCCAATTCGGGTATTATGAAAATGGATAAAGGGAAAAGGAAATATTACAAT
AAGAGAAGGAAAAGAATGTTTGGTGGGTCGGATTCGGAGGATGAGAATAACAGGGACAAG
GATAATGAGCTTGTTGAGTTGAAGCAGGAAGTTGTGGAGCTACCTACATTGCACAAGAAG
GAAGAAGAGTTGTACTTTTATGACAATTTTGCTTATCCTTGGGAGAAGGATAAGCATTAT
AAGATGGTATATCAATTGGAGAAGAAGTTTTTTCCCGATCAGGGTTTTGATAAGGCTTTT
CTTGATCCTGGGCAGTCGAATGAGAATGTAAAGAGGAGTAAAAAGAAATTGGGGAAGAAG
GAAAATATAATAGAAAAAGATATTGATGGTGGGGATGGTAAAAGTTTGATCTTTTTCGAA
GAGGAAGAAAAAAGTGTCAGCTCTGAAACTAAAGAGGAAGCTAAAGTTGATGTATCGGAA
AAGAAAGTGGAAGAGTTCTTCAAGTGTTTGAAGAAAGTTCCAAATAAGGAAAATGGTGTT
GCCAGTGCCGAGCCATTTCTAGCGACAAGGAGTACAGGGCTTCCTCCTAAATGGGATAGT
CCGGGTGGGACTGTTGTATTAGTGAACAAACCAAAAGGTTGGACTTCTTTTACTGTTTGT
GGAAAGTTGCGTCGCTTAACAAAAGTGAAAAAGGTTGGCCATGCTGGAACACTTGATCCT
ATGGCAACTGGCTTATTGATTGTATGTGTTGGTAGATCTACGAAGATCGTTGACAGCTAT
CAGGGTATGATGAAGGGCTACAGTGGAATCTTCCGTTTGGGAGAAGCCACCTCTACCTGG
GATGCAGATTCCCCGGTTATTCAACGAGATCCATGGGAGCATATCAAGGATGAGGACATA
AAGAAAACGGCAGCATCCTTTTTTGGAGAGATATGGCAAGTCCCTCCGATGTTCTCAGCA
ATCAAAGTTGGTGGTGAAAAGATGTATGATAAAGCAAGAAGAGGAGAAAGCATCGAACTT
GCACCGAGAAGGATTTCAATTTTCGAATTTGACGTGAAGCGGAGTTTAGATGACAGACAG
AATGTGATTTTCCGAGTAAGATGCTCAAAAGGTACCTATGTCCGATCACTTTGTGCAGAC
TTCGGGAAAGCTCTTGGCAGTTGTGCTCACTTGACAGCTCTGCGACGAGATTCAATTGGA
GAGTATACAGCGGATGATGCTTGGGAATTTCAAGAATTGGAAGAGGCAATCACCAAAGGA
TATTTGTAA