Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032816
CDS Infomation

pacid=37424362 polypeptide=PGSC0003DMP400022323 locus=PGSC0003DMG400012603 ID=PGSC0003DMT400032816.v4.03 annot-version=v4.03
Sequence

ATGGAGTCTCTTGTTGATGGAATCAGTTCCTTGCCAAATGTTCACAATTCATTCGCTGCG
GTCGAGTGCAATACATCTTTGGCCTCCAAGATAAGTCATCCTCCTTTGATGAAACAATCC
GAAAACAAAGAGTCATCTATCTCATATCCAATAGCAATGGACCTTGGTTCCAACACAGCT
CATACTCAAACCGGATCAGTGACTGGTTCAAAGCATTTTGAAGCAAATGAAGATACTGTA
AATCAATTAGCAGAAGGTTGTTCAGGAGAGCAGGTTTTGGCTTTGGAAACTGAATCATCT
ATCAAGGATTTACACTATGTTTCGAAGAATAGTACTTCAAACGATGATTTGAATGCTGCT
GCTGCCAAAGGATTGCCATCTGAGTCAGGAATCACCTATTGTCCTAGTCCTCAAAACAGT
TTTTATTCTGCTACACAGTACACAGAAGCCAAACAAAGTTTTTCCAACACAGAAGTCAGT
GAATGTGCTAGCAGCACTGTGGACAAGTCTGGTGAAAGTGGTGATGTTAGTAACTCTTGT
GATCTTGTTGAGAGCAGAAAAACAAGCTTCTACAGAGGCAGCACAGGTAGTGATGTTAGT
GATGAAAGCAGCTCTAGTAGTTTCAATAGCACAACAGTATATAAACCGCATAAGGCAAAT
GATACAAGGTGGGATGCAATTCAAGTTATTAGAGCCCGTGAGGGAACATTGGGTTTTAAC
CACTTTAGACTGTTGAAGAGATTGGGATGTGGTGATATAGGAAGTGTTTTTCTAGCAGAG
TTGATTGGCACAAGATGTTTCTTTGCCATGAAAGTGATGGACAAGGCAGCTCTAGAAAGT
CGCAAGAAACTTGTGAGAGCTCAAACGGAAAGAGAGATACTGCAGTCTCTGGATCATCCC
TTTCTACCAACACTGTATTCACACTTTGAAACAGACAAATTTTCCTGCTTGGTGATGGAA
TTCTGCCCTGGTGGAGATTTGCATGCACTTAGGCAAAAGCAGCCAGGAAAATTTTTCCCG
GAGCATGCTGCCAGGTTTTATGTGGCTGAAGTCCTTCTTGCTCTAGAGTATTTGCATATG
CTTGGAATCATTTACAGAGACCTTAAACCAGAGAATGTTCTGGTTCGAGAAGATGGCCAT
ATAATGCTTTCTGATTTTGACCTCTCTTTGAGGTGTGCCGTGAGCCCGACTCTAGTTAGA
TCCTCAAATTCAAGCTTAGAGTCCAAGAGCTCATCATACTGTGTCCAGCCTGCTTGTATT
GAGCCATCTTGTGTCATACAGCCTGCATGTATCCAACCTTCATGTTTTACACCACGTTTC
CTAAGCAAGACCAAGAAAGAAAAGAAGTCCAAACAAAAAACTGAAACATATAACCAAGTG
AACCGCCCTCTTCCAGAACTCCTTGCTGAACCAACGAGTGCTCGATCAATGTCTTTTGTG
GGGACACATGAGTACCTAGCTCCAGAAATTATAAAAGGTGAAGGACACGGCAGTGCTGTA
GATTGGTGGACATTTGGGATCTTTCTCTATGAACTCTTGTTTGGACAAACTCCTTTCAAG
GGAGCAGGCAACAGGGCAACGTTGTTTAACGTTGTCGGTCAGCCCTTGAAATTTCCTGAA
ACACCTAGTGTTAGTTTTGCAGCAAGGGACTTGATAAGAGGCCTACTTGTGAAGGAGCCA
CAACATCGCCTTGCATATAGGCGAGGGGCTACTGAAATAAAACAACATCCTTTCTTTCAG
AATGTGAACTGGGCACTTATAAGATGTACCAGTCCTCCAGATGTACCAAAGCCGTCCTCC
ATGACATATAATATGCCCCGTACACCGCCAGCAGGAAAGACCCCCGGAGTTGATGTGAAG
CCTTCAGGTAATTATTTTGAGATTGATTTCTTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400022323
PEP Infomation

pacid=37424362 transcript=PGSC0003DMT400032816 locus=PGSC0003DMG400012603 ID=PGSC0003DMT400032816.v4.03 annot-version=v4.03
Sequence

MESLVDGISSLPNVHNSFAAVECNTSLASKISHPPLMKQSENKESSISYPIAMDLGSNTA
HTQTGSVTGSKHFEANEDTVNQLAEGCSGEQVLALETESSIKDLHYVSKNSTSNDDLNAA
AAKGLPSESGITYCPSPQNSFYSATQYTEAKQSFSNTEVSECASSTVDKSGESGDVSNSC
DLVESRKTSFYRGSTGSDVSDESSSSSFNSTTVYKPHKANDTRWDAIQVIRAREGTLGFN
HFRLLKRLGCGDIGSVFLAELIGTRCFFAMKVMDKAALESRKKLVRAQTEREILQSLDHP
FLPTLYSHFETDKFSCLVMEFCPGGDLHALRQKQPGKFFPEHAARFYVAEVLLALEYLHM
LGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVRSSNSSLESKSSSYCVQPACI
EPSCVIQPACIQPSCFTPRFLSKTKKEKKSKQKTETYNQVNRPLPELLAEPTSARSMSFV
GTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGQTPFKGAGNRATLFNVVGQPLKFPE
TPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCTSPPDVPKPSS
MTYNMPRTPPAGKTPGVDVKPSGNYFEIDFF*

Transcript Sequence

Transcript ID

PGSC0003DMT400032816
Transcript Infomation

pacid=37424362 locus=PGSC0003DMG400012603 ID=PGSC0003DMT400032816.v4.03 annot-version=v4.03
Sequence

ATGGAGTCTCTTGTTGATGGAATCAGTTCCTTGCCAAATGTTCACAATTCATTCGCTGCG
GTCGAGTGCAATACATCTTTGGCCTCCAAGATAAGTCATCCTCCTTTGATGAAACAATCC
GAAAACAAAGAGTCATCTATCTCATATCCAATAGCAATGGACCTTGGTTCCAACACAGCT
CATACTCAAACCGGATCAGTGACTGGTTCAAAGCATTTTGAAGCAAATGAAGATACTGTA
AATCAATTAGCAGAAGGTTGTTCAGGAGAGCAGGTTTTGGCTTTGGAAACTGAATCATCT
ATCAAGGATTTACACTATGTTTCGAAGAATAGTACTTCAAACGATGATTTGAATGCTGCT
GCTGCCAAAGGATTGCCATCTGAGTCAGGAATCACCTATTGTCCTAGTCCTCAAAACAGT
TTTTATTCTGCTACACAGTACACAGAAGCCAAACAAAGTTTTTCCAACACAGAAGTCAGT
GAATGTGCTAGCAGCACTGTGGACAAGTCTGGTGAAAGTGGTGATGTTAGTAACTCTTGT
GATCTTGTTGAGAGCAGAAAAACAAGCTTCTACAGAGGCAGCACAGGTAGTGATGTTAGT
GATGAAAGCAGCTCTAGTAGTTTCAATAGCACAACAGTATATAAACCGCATAAGGCAAAT
GATACAAGGTGGGATGCAATTCAAGTTATTAGAGCCCGTGAGGGAACATTGGGTTTTAAC
CACTTTAGACTGTTGAAGAGATTGGGATGTGGTGATATAGGAAGTGTTTTTCTAGCAGAG
TTGATTGGCACAAGATGTTTCTTTGCCATGAAAGTGATGGACAAGGCAGCTCTAGAAAGT
CGCAAGAAACTTGTGAGAGCTCAAACGGAAAGAGAGATACTGCAGTCTCTGGATCATCCC
TTTCTACCAACACTGTATTCACACTTTGAAACAGACAAATTTTCCTGCTTGGTGATGGAA
TTCTGCCCTGGTGGAGATTTGCATGCACTTAGGCAAAAGCAGCCAGGAAAATTTTTCCCG
GAGCATGCTGCCAGGTTTTATGTGGCTGAAGTCCTTCTTGCTCTAGAGTATTTGCATATG
CTTGGAATCATTTACAGAGACCTTAAACCAGAGAATGTTCTGGTTCGAGAAGATGGCCAT
ATAATGCTTTCTGATTTTGACCTCTCTTTGAGGTGTGCCGTGAGCCCGACTCTAGTTAGA
TCCTCAAATTCAAGCTTAGAGTCCAAGAGCTCATCATACTGTGTCCAGCCTGCTTGTATT
GAGCCATCTTGTGTCATACAGCCTGCATGTATCCAACCTTCATGTTTTACACCACGTTTC
CTAAGCAAGACCAAGAAAGAAAAGAAGTCCAAACAAAAAACTGAAACATATAACCAAGTG
AACCGCCCTCTTCCAGAACTCCTTGCTGAACCAACGAGTGCTCGATCAATGTCTTTTGTG
GGGACACATGAGTACCTAGCTCCAGAAATTATAAAAGGTGAAGGACACGGCAGTGCTGTA
GATTGGTGGACATTTGGGATCTTTCTCTATGAACTCTTGTTTGGACAAACTCCTTTCAAG
GGAGCAGGCAACAGGGCAACGTTGTTTAACGTTGTCGGTCAGCCCTTGAAATTTCCTGAA
ACACCTAGTGTTAGTTTTGCAGCAAGGGACTTGATAAGAGGCCTACTTGTGAAGGAGCCA
CAACATCGCCTTGCATATAGGCGAGGGGCTACTGAAATAAAACAACATCCTTTCTTTCAG
AATGTGAACTGGGCACTTATAAGATGTACCAGTCCTCCAGATGTACCAAAGCCGTCCTCC
ATGACATATAATATGCCCCGTACACCGCCAGCAGGAAAGACCCCCGGAGTTGATGTGAAG
CCTTCAGGTAATTATTTTGAGATTGATTTCTTCTGA