Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032806
CDS Infomation

pacid=37428933 polypeptide=PGSC0003DMP400022315 locus=PGSC0003DMG400012599 ID=PGSC0003DMT400032806.v4.03 annot-version=v4.03
Sequence

ATGGAGCTTAAAGCTTCATCTCCAAAGCCGGTATTTTCAACTTCTGATTGCGACAGTGAT
CCCGAGGAGAAAGAAATTAGTGATGACGATGATCGTAATCATAAGCATCGTAGAAAGGAA
ACACGTTCACAGTCTGCAGAGACAGGGGCTCTTGAACCTGTTTTGAGTAGACCATTCAGG
AAAAGGAACAAGCCGTTTGAAAATGGACATCCGTACCAGGAAGGAGATTCTCACTGGGGT
GATACTAGGTTTGGTAAAAGACGAGGAATGGGTTCTTTTGCCAGGACACCTTCTGATTCA
TATCAGAGGATGAGGCTAAATCAGTCCGTTTCTGGTCATGCTGGTCCTGGTAGGGGTCGA
GGAAGAGAATCTGGTGCTTGGGGTCCCTGTGAATCTAGGTTCGGCTCTATTGATATTGCA
TCTCAATTGGTGCCACCTCTTCTTTATACTGGAAGGGGGCTGCAAAATGTTTCTAGCGGA
CAGAGTTTGTCTTGGAATGCATTTGGAATGGTTCCAGGAATGCCCAATGGAGGGCTTGAT
ACACTTCATGCCCTTGGTTTACAGGGAACACTCCGGACAGCCTTGAATCCTGCCATGAGT
ATGGGAATTCCAAGGCAAATGTGTAGAGACTTCGAGGAGCGTGGATTTTGCCTAAGAGGA
GATATGTGCCCACTGGAGCATGGAGTAAATCGTATCGTTGTTGAAGATGTTCAGAGCCTT
TCTCAGTTTAATCTTCCCATTGCTCATATGCTGGGACCAAATACTGCACAAGGATCTTTA
CCCGCAATAGGCCCCTCTAGCTCATCAGCTAGTGGAAAATCTTTACATAGCAAAAGTATC
AACCCTTCAGTGATTGACGGTGGATTAGGTATGACTGATACTTTTGGTGGTGGTTCTGTG
GCTGGGGGAGCTGATTTCTATGATCCAGATCAGCCTTTATGGTCAAATGATCATCCTGTA
ACTTCAACAGCACTCTTGGATGTCAATCAGTCTAAAATTGATGACATGGGGCCTTTGCTG
AATGCTGACTCCTCTGTTCGGAATCAGGCTGGGCTTTATGATGGCTGTAAACTCGAGCCT
ATAGATAGAGGTGCCGGAACAGCTTCAGGATCTCAAAGTGTGTGGGGAAGAATGACTCGT
TCAAAAAATAAGTTTGAACCATTCAGTAGCAGTCAGGGTATAACCCGTCATAGTAAGCAA
ACAAATGTAGATACCATAGACCAGCAAGTGCTGGAATCATCTTCAGAGCCCCAAAGTAGT
TCTGGACGCAATATGCGAAACCCATCTCAAAAGGCACTGCGTAGTCTATTTGTAAGAGGG
ATTCCTCAAAAGGACAACAAACCAGAAGCTCTTCTTTCACATTTTAAAAAATTCGGTGAG
GTTATCGACATCTACATCCCAGTAAATGGTGAACAAGCCTTTGTTCAATTTTCTAAGAGG
GAGGAAGCTGAGGCTGCTTTAAAAGCACCAGATGCTGTGATGGGAAACCGCTTTATAAAG
CTTTTCTGGGCAAACAGGGATAGCATTATGGATGATGGAGTACATGGTAGTAGTAATTTA
CCCCGCGGTGGGACCCCTAGTACAGTTCCACCCCATCTATCCGTTCCTCATAAAAGAAGA
GACAATCTGCAGACTGTATCCCCCAAACCTGCTGAAAATGGTGTTGTTCCAGTAGCCACC
TCTGATCTCCCCAAGCCTGTGGCTAAGAATGGTCCCAAAACTACACCAGCTTTGCAAAAA
AAGCTGGGAACTTTAGAGCTTCTGAAGGAAGAAATGCGCAAGAAGCAGGAAATGCTTGAG
CAGAAGCGGAATGACTTCCGACGCAAGTTGGACAAGCTTGAGAAGCAAGCCGTGGGTGTG
AAAGATGAGGCAGTGCCAGATCAGTCTGTGAAGAAACCAAAGGGAGGAGGAAAAGGTTCC
AACTCTGGTGAAGTGGAAAGTTCAAGCCCTGCAGAACCTAGTAATGCTGTGTCATCACCA
CATGCCAAAGCAACACCATTTAGTAGCAGAACTACAGAGAATGCAGAGCCCAGTTGTTCC
AAGTCATCTTCGCTTGTCGCAGCGAAGGAAGCTTCAAACTTGAAGCAGTCGATCCGTCCA
TTGGCACCAGTTGGCGCACCGTTTATCTTAAATAGATACAAACTAGATAACCGACCCACC
ACATTCAAGATCCTTCCACCTCTGCCAAGTGGTCTGGCAAATGTTGACGTCCTGAAGGAA
CACTTTTCTACATTTGGTGATCTTCTGTCTGTTGAGCTGGAAGATTTAGAACCTCAAGAT
TGTAATAATGGCTCAGAGGTGCTAAATACATCTGCTAGGATATCTTTTCGATCACGCCGG
TCTGCTGAAAGAGCATATTTGAATGGTAAATGCTGGCAAGACCAAACTCTGCATTTTATG
TGGTTGCAATCCAGTAATTCCGCAAAGGGTATTGGTGTTGGAGAAAATGTCACTCCAGCT
TCAAAGCAGTCTTCAGATGTTAATGGGCAATCCATTGCAAACAGTTGTCTGGCTGGTTCC
CAGGAAGGAAGCGGGGCAGGGAATGGTGAACCTGAAAATCAAGAAAGAAGAGAAAAAGAA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400022315
PEP Infomation

pacid=37428933 transcript=PGSC0003DMT400032806 locus=PGSC0003DMG400012599 ID=PGSC0003DMT400032806.v4.03 annot-version=v4.03
Sequence

MELKASSPKPVFSTSDCDSDPEEKEISDDDDRNHKHRRKETRSQSAETGALEPVLSRPFR
KRNKPFENGHPYQEGDSHWGDTRFGKRRGMGSFARTPSDSYQRMRLNQSVSGHAGPGRGR
GRESGAWGPCESRFGSIDIASQLVPPLLYTGRGLQNVSSGQSLSWNAFGMVPGMPNGGLD
TLHALGLQGTLRTALNPAMSMGIPRQMCRDFEERGFCLRGDMCPLEHGVNRIVVEDVQSL
SQFNLPIAHMLGPNTAQGSLPAIGPSSSSASGKSLHSKSINPSVIDGGLGMTDTFGGGSV
AGGADFYDPDQPLWSNDHPVTSTALLDVNQSKIDDMGPLLNADSSVRNQAGLYDGCKLEP
IDRGAGTASGSQSVWGRMTRSKNKFEPFSSSQGITRHSKQTNVDTIDQQVLESSSEPQSS
SGRNMRNPSQKALRSLFVRGIPQKDNKPEALLSHFKKFGEVIDIYIPVNGEQAFVQFSKR
EEAEAALKAPDAVMGNRFIKLFWANRDSIMDDGVHGSSNLPRGGTPSTVPPHLSVPHKRR
DNLQTVSPKPAENGVVPVATSDLPKPVAKNGPKTTPALQKKLGTLELLKEEMRKKQEMLE
QKRNDFRRKLDKLEKQAVGVKDEAVPDQSVKKPKGGGKGSNSGEVESSSPAEPSNAVSSP
HAKATPFSSRTTENAEPSCSKSSSLVAAKEASNLKQSIRPLAPVGAPFILNRYKLDNRPT
TFKILPPLPSGLANVDVLKEHFSTFGDLLSVELEDLEPQDCNNGSEVLNTSARISFRSRR
SAERAYLNGKCWQDQTLHFMWLQSSNSAKGIGVGENVTPASKQSSDVNGQSIANSCLAGS
QEGSGAGNGEPENQERREKE*

Transcript Sequence

Transcript ID

PGSC0003DMT400032806
Transcript Infomation

pacid=37428933 locus=PGSC0003DMG400012599 ID=PGSC0003DMT400032806.v4.03 annot-version=v4.03
Sequence

ATGGAGCTTAAAGCTTCATCTCCAAAGCCGGTATTTTCAACTTCTGATTGCGACAGTGAT
CCCGAGGAGAAAGAAATTAGTGATGACGATGATCGTAATCATAAGCATCGTAGAAAGGAA
ACACGTTCACAGTCTGCAGAGACAGGGGCTCTTGAACCTGTTTTGAGTAGACCATTCAGG
AAAAGGAACAAGCCGTTTGAAAATGGACATCCGTACCAGGAAGGAGATTCTCACTGGGGT
GATACTAGGTTTGGTAAAAGACGAGGAATGGGTTCTTTTGCCAGGACACCTTCTGATTCA
TATCAGAGGATGAGGCTAAATCAGTCCGTTTCTGGTCATGCTGGTCCTGGTAGGGGTCGA
GGAAGAGAATCTGGTGCTTGGGGTCCCTGTGAATCTAGGTTCGGCTCTATTGATATTGCA
TCTCAATTGGTGCCACCTCTTCTTTATACTGGAAGGGGGCTGCAAAATGTTTCTAGCGGA
CAGAGTTTGTCTTGGAATGCATTTGGAATGGTTCCAGGAATGCCCAATGGAGGGCTTGAT
ACACTTCATGCCCTTGGTTTACAGGGAACACTCCGGACAGCCTTGAATCCTGCCATGAGT
ATGGGAATTCCAAGGCAAATGTGTAGAGACTTCGAGGAGCGTGGATTTTGCCTAAGAGGA
GATATGTGCCCACTGGAGCATGGAGTAAATCGTATCGTTGTTGAAGATGTTCAGAGCCTT
TCTCAGTTTAATCTTCCCATTGCTCATATGCTGGGACCAAATACTGCACAAGGATCTTTA
CCCGCAATAGGCCCCTCTAGCTCATCAGCTAGTGGAAAATCTTTACATAGCAAAAGTATC
AACCCTTCAGTGATTGACGGTGGATTAGGTATGACTGATACTTTTGGTGGTGGTTCTGTG
GCTGGGGGAGCTGATTTCTATGATCCAGATCAGCCTTTATGGTCAAATGATCATCCTGTA
ACTTCAACAGCACTCTTGGATGTCAATCAGTCTAAAATTGATGACATGGGGCCTTTGCTG
AATGCTGACTCCTCTGTTCGGAATCAGGCTGGGCTTTATGATGGCTGTAAACTCGAGCCT
ATAGATAGAGGTGCCGGAACAGCTTCAGGATCTCAAAGTGTGTGGGGAAGAATGACTCGT
TCAAAAAATAAGTTTGAACCATTCAGTAGCAGTCAGGGTATAACCCGTCATAGTAAGCAA
ACAAATGTAGATACCATAGACCAGCAAGTGCTGGAATCATCTTCAGAGCCCCAAAGTAGT
TCTGGACGCAATATGCGAAACCCATCTCAAAAGGCACTGCGTAGTCTATTTGTAAGAGGG
ATTCCTCAAAAGGACAACAAACCAGAAGCTCTTCTTTCACATTTTAAAAAATTCGGTGAG
GTTATCGACATCTACATCCCAGTAAATGGTGAACAAGCCTTTGTTCAATTTTCTAAGAGG
GAGGAAGCTGAGGCTGCTTTAAAAGCACCAGATGCTGTGATGGGAAACCGCTTTATAAAG
CTTTTCTGGGCAAACAGGGATAGCATTATGGATGATGGAGTACATGGTAGTAGTAATTTA
CCCCGCGGTGGGACCCCTAGTACAGTTCCACCCCATCTATCCGTTCCTCATAAAAGAAGA
GACAATCTGCAGACTGTATCCCCCAAACCTGCTGAAAATGGTGTTGTTCCAGTAGCCACC
TCTGATCTCCCCAAGCCTGTGGCTAAGAATGGTCCCAAAACTACACCAGCTTTGCAAAAA
AAGCTGGGAACTTTAGAGCTTCTGAAGGAAGAAATGCGCAAGAAGCAGGAAATGCTTGAG
CAGAAGCGGAATGACTTCCGACGCAAGTTGGACAAGCTTGAGAAGCAAGCCGTGGGTGTG
AAAGATGAGGCAGTGCCAGATCAGTCTGTGAAGAAACCAAAGGGAGGAGGAAAAGGTTCC
AACTCTGGTGAAGTGGAAAGTTCAAGCCCTGCAGAACCTAGTAATGCTGTGTCATCACCA
CATGCCAAAGCAACACCATTTAGTAGCAGAACTACAGAGAATGCAGAGCCCAGTTGTTCC
AAGTCATCTTCGCTTGTCGCAGCGAAGGAAGCTTCAAACTTGAAGCAGTCGATCCGTCCA
TTGGCACCAGTTGGCGCACCGTTTATCTTAAATAGATACAAACTAGATAACCGACCCACC
ACATTCAAGATCCTTCCACCTCTGCCAAGTGGTCTGGCAAATGTTGACGTCCTGAAGGAA
CACTTTTCTACATTTGGTGATCTTCTGTCTGTTGAGCTGGAAGATTTAGAACCTCAAGAT
TGTAATAATGGCTCAGAGGTGCTAAATACATCTGCTAGGATATCTTTTCGATCACGCCGG
TCTGCTGAAAGAGCATATTTGAATGGTAAATGCTGGCAAGACCAAACTCTGCATTTTATG
TGGTTGCAATCCAGTAATTCCGCAAAGGGTATTGGTGTTGGAGAAAATGTCACTCCAGCT
TCAAAGCAGTCTTCAGATGTTAATGGGCAATCCATTGCAAACAGTTGTCTGGCTGGTTCC
CAGGAAGGAAGCGGGGCAGGGAATGGTGAACCTGAAAATCAAGAAAGAAGAGAAAAAGAA
TGA