Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032739
CDS Infomation

pacid=37436744 polypeptide=PGSC0003DMP400022256 locus=PGSC0003DMG400012571 ID=PGSC0003DMT400032739.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCATCAACATTTCTTTCCCTTCAACATCTCTCAGTCGATCCCAAGCATTAAAG
AACTTCAAGTTGTTCAATGGATTGCATTCCGGAGATCTAGTTTCTCTTAATGGGGTATCT
TCAGGGTCATTCATACGGCTTAATGCTAGACCACACTTAACCATCAAGAATGATTTCAAG
ATTAATTCTGCATTATTATCTGGTGAAGGAGACATCCGTTCTCAATCCAGGGGAGAAACT
TCTCTGTTTAGTAGCCTCTCTACAGGAACTGAGACTCAACCTGATGCTGTAACCTTTGCA
ACGCTAGAAGCAGATGGTGTTCCTACAACAAGTGGCTTTCTTTCAGATGATGATGAATGT
GATTTGGATTGTCCGACGGAAGGTTTTTCATCTGTTCCTGAGGCTATTGAAGACATTCGC
CAAGGAAAGATGGTGCTAGTTACAGATGATGAAGGCAGAGAAAATGAAGGGGATTTAGTT
ATGGCTGCATCCAAAGCTACACCAGAAGCAATGGCTTTCTTTGTGAAGTATGGAACAGGG
ATAGTTTGTGTGAGCATGACAGAAGAACACTTGGAGAGGTTACAGCTTCCATTGATGGTA
AACGATAAAAAGAATGAGGAGAAACTTTGTACAGCATTCACAGTCTCAGTGGACGCGAAA
CATGGAACGACTACAGGAGTATCTGCTCATGATAGAGCAACGACAGTAATGGCACTTGCG
TCCGGAGATTCAAAGCCTGAGGATTTCAATCGACCGGGGCATATTTTTCCTTTGAAATAC
AGGGAAGGCGGGGTTTTAAAACGAGCTGGACATACTGAGGCTTCAGTGGATCTTGCCGTG
TTAGCTGGCTTAGACCCTGTTGGAGTAATATGTGAGGTTGTGGATGATGATGGTTCCATG
GCTAGATTGCCTATGCTTCGTAAATTTGCAAAAGAACATAACTTGAAGATCATATCAGTT
GCTGACTTAATCAGATATAGGAGGAAAACAGATCAGCTGGTAGAGCATGCTTCTGCTGCA
AGAATACCTACTATGTGGGGCCCGTTTACTGCCCATTGCTTCAAGTCAATAATAGATGGA
ATTGAGCACATTGCTATGGTTAAGGGGGATATAGGAGATGGACAAGATATTCTTGTCCGG
GTACACTCGGAATGCCTCACAGGAGATATATTTGGTTCAGCCAGATGTGACTGTGGATCC
CAGCTGGCAACTGCAATGCAACAAATTGAGGCTGCTGGCAGGGGGGTTTTGGTTTACCTC
CGTGGTCATGAGGGTAGAGGCATTGGTTTGGGTCACAAACTTCGTGCTTATAATTTACAA
GATGCTGGACGTGATACTGTTGAAGCGAATGAAGATCTTGGTTTGCCCATTGATTCAAGA
GAGTACGGGGTTGGTGCACAGATCTTAAGGGATCTTGGTGTTCGAACTATGAAGCTGATG
ACGAACAATCCTGCAAAATACAGCGGGCTCAAGGGTTATGGTTTGGCAATTTCTGGTAGG
GTCCCCGTTGTGACTCCCATTACAAAAGATAACAAGAGATATTTGGAAACAAAACGTGCT
AAAATGGGCCATGTATACGGTTTGAACCTTATTCGCCCGGCAACCAGCACCAGCACCAGC
ACCAGCACAACAAATGGTAAACCAAACTCTGAGAATACTTCTACTATAAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400022256
PEP Infomation

pacid=37436744 transcript=PGSC0003DMT400032739 locus=PGSC0003DMG400012571 ID=PGSC0003DMT400032739.v4.03 annot-version=v4.03
Sequence

MASINISFPSTSLSRSQALKNFKLFNGLHSGDLVSLNGVSSGSFIRLNARPHLTIKNDFK
INSALLSGEGDIRSQSRGETSLFSSLSTGTETQPDAVTFATLEADGVPTTSGFLSDDDEC
DLDCPTEGFSSVPEAIEDIRQGKMVLVTDDEGRENEGDLVMAASKATPEAMAFFVKYGTG
IVCVSMTEEHLERLQLPLMVNDKKNEEKLCTAFTVSVDAKHGTTTGVSAHDRATTVMALA
SGDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLDPVGVICEVVDDDGSM
ARLPMLRKFAKEHNLKIISVADLIRYRRKTDQLVEHASAARIPTMWGPFTAHCFKSIIDG
IEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGSQLATAMQQIEAAGRGVLVYL
RGHEGRGIGLGHKLRAYNLQDAGRDTVEANEDLGLPIDSREYGVGAQILRDLGVRTMKLM
TNNPAKYSGLKGYGLAISGRVPVVTPITKDNKRYLETKRAKMGHVYGLNLIRPATSTSTS
TSTTNGKPNSENTSTIR*

Transcript Sequence

Transcript ID

PGSC0003DMT400032739
Transcript Infomation

pacid=37436744 locus=PGSC0003DMG400012571 ID=PGSC0003DMT400032739.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCATCAACATTTCTTTCCCTTCAACATCTCTCAGTCGATCCCAAGCATTAAAG
AACTTCAAGTTGTTCAATGGATTGCATTCCGGAGATCTAGTTTCTCTTAATGGGGTATCT
TCAGGGTCATTCATACGGCTTAATGCTAGACCACACTTAACCATCAAGAATGATTTCAAG
ATTAATTCTGCATTATTATCTGGTGAAGGAGACATCCGTTCTCAATCCAGGGGAGAAACT
TCTCTGTTTAGTAGCCTCTCTACAGGAACTGAGACTCAACCTGATGCTGTAACCTTTGCA
ACGCTAGAAGCAGATGGTGTTCCTACAACAAGTGGCTTTCTTTCAGATGATGATGAATGT
GATTTGGATTGTCCGACGGAAGGTTTTTCATCTGTTCCTGAGGCTATTGAAGACATTCGC
CAAGGAAAGATGGTGCTAGTTACAGATGATGAAGGCAGAGAAAATGAAGGGGATTTAGTT
ATGGCTGCATCCAAAGCTACACCAGAAGCAATGGCTTTCTTTGTGAAGTATGGAACAGGG
ATAGTTTGTGTGAGCATGACAGAAGAACACTTGGAGAGGTTACAGCTTCCATTGATGGTA
AACGATAAAAAGAATGAGGAGAAACTTTGTACAGCATTCACAGTCTCAGTGGACGCGAAA
CATGGAACGACTACAGGAGTATCTGCTCATGATAGAGCAACGACAGTAATGGCACTTGCG
TCCGGAGATTCAAAGCCTGAGGATTTCAATCGACCGGGGCATATTTTTCCTTTGAAATAC
AGGGAAGGCGGGGTTTTAAAACGAGCTGGACATACTGAGGCTTCAGTGGATCTTGCCGTG
TTAGCTGGCTTAGACCCTGTTGGAGTAATATGTGAGGTTGTGGATGATGATGGTTCCATG
GCTAGATTGCCTATGCTTCGTAAATTTGCAAAAGAACATAACTTGAAGATCATATCAGTT
GCTGACTTAATCAGATATAGGAGGAAAACAGATCAGCTGGTAGAGCATGCTTCTGCTGCA
AGAATACCTACTATGTGGGGCCCGTTTACTGCCCATTGCTTCAAGTCAATAATAGATGGA
ATTGAGCACATTGCTATGGTTAAGGGGGATATAGGAGATGGACAAGATATTCTTGTCCGG
GTACACTCGGAATGCCTCACAGGAGATATATTTGGTTCAGCCAGATGTGACTGTGGATCC
CAGCTGGCAACTGCAATGCAACAAATTGAGGCTGCTGGCAGGGGGGTTTTGGTTTACCTC
CGTGGTCATGAGGGTAGAGGCATTGGTTTGGGTCACAAACTTCGTGCTTATAATTTACAA
GATGCTGGACGTGATACTGTTGAAGCGAATGAAGATCTTGGTTTGCCCATTGATTCAAGA
GAGTACGGGGTTGGTGCACAGATCTTAAGGGATCTTGGTGTTCGAACTATGAAGCTGATG
ACGAACAATCCTGCAAAATACAGCGGGCTCAAGGGTTATGGTTTGGCAATTTCTGGTAGG
GTCCCCGTTGTGACTCCCATTACAAAAGATAACAAGAGATATTTGGAAACAAAACGTGCT
AAAATGGGCCATGTATACGGTTTGAACCTTATTCGCCCGGCAACCAGCACCAGCACCAGC
ACCAGCACAACAAATGGTAAACCAAACTCTGAGAATACTTCTACTATAAGATGA