Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032690
CDS Infomation

pacid=37438499 polypeptide=PGSC0003DMP400022216 locus=PGSC0003DMG400012552 ID=PGSC0003DMT400032690.v4.03 annot-version=v4.03
Sequence

ATGGCGACAGTTGCACCGAATTGTGGCCCAAAGTTGGAAGCGGTGGCTCACATAGACATC
GGTAAACTTTCCCAATCTGAACTCCACGCACTTTCCCTTTGCTCCGACTCCGCTTACGAT
CTCCGGCATACTAACGAAGTCGTTATTCCCCAAATTGACCGGTCCCTCTTCAATGAATCC
GCCGGAAGCCGTCGTCAAACCTATTCCCGTCTCCGTCACCAACACCACCGTTCTCGCGTG
CCCGGTCTTCATCCTTCAACTTCACAACCCAAACCCCCTTTTACTTCCGACCCTGAAAAC
CACGCAATTCTTCATTTTCTTAAGTTCTTTATTCGTAATCCCAATTCCCAATCTCCACCG
CCTGTTCCTCCTCCTCCTATTACACAACCGGCTACTTCCGGGATTCAAGAAAATACCCTA
CTTTTGATGAATGAACCTGACAAAAAGAGGAAGAGAGGACGGAAACCTAAGGATAACAAG
AAGCTGAAAGAGAATGGGGTGGAAATTGTGAATAAAAACGGTGAGGTGGTGGATTTAAAC
AATTTGGAGAATAATGGGGATAAATTATACAGTGGAGAATTGGAGAAAAGGACTGTTAGG
TTACAGACTGAAGAAGAGGTACTCGGTTTTGTTAGGGATTTGGAGGGGCAGTGGTGTAGC
AGAAGGAAGAAGAGGAAATATGTTGATGCTAGTGGGTTTGGTGATACATTGCCTATTGGT
TGGAAGCTCTTGCTAGCCCTACGTAGACGGGATGGTCGCGTCTGGGTTTATTGTCGTAGA
ATTGTGAGCCCTACTGGTCAACAGTTTATATCATGCAAAGAGGCTTCATCATATTTGCGG
TCCCATTTTTTGTCTAGTGAAGCAAACCAGCCAGCTCAGCAGGTTGATGACGCTGTTGCT
AAAAGTGTGATTAACTTCCACAGTGATACCAGTTTGGTTTTGTCAACAGACATCCAAGAA
AATCCTCATTCGCTTCAAAAAGGTGATGTGGCAAAGCATGCCGTAGTTGCACATGCAGTT
GTACCCAGTTCATCTACTCTAGACCTACATCTGAGTGAAGTTTGCTTGATGGAGATGGAT
AATCTCCCTGAGGTTAAAGTTCAAGACATTTTTGAATGTTATAAATGTAACTTGATGTTT
GAAGAAAAGAATGCATATTTGCAGCATCTGTTCTCATTTCACCAGCGGACCACAAAAAGG
TACAGGGTTGGGCCATCTGTTAGTGATGGGGTCATAATTAGAGATGGAAAATATGAATGC
CAGTTCTGCCATAAGGTGTTTGAAGAACGGCGTAGTTACAATGGTCATGTAGGAGTCCAT
GTGAGAAACAATGCAAGAGGAACTGTGGATATAGCTGCTGCTGTTGCAGCAGACAAGGGT
GTTCAATCTCCACATCATGATGAGTTGCTTTCAAGGACATGTAAAATGGATGCTTTAATT
GAAATTGCCCAAAATGCAGTTGTAGAAACTTCTAGTGCTAGACCTGCGACCAAGGACAGC
AGCATGCCATCTAGTACTTTAATGGACTTGGATGGAAATATGGCTACCAACATTGACCAA
GTTGCGAGGTCAAACACTGATACTGGATTGTCAGATACCAAGGAATTTAAGGCTGAAACA
TGTCTTGAACAAGACAGAAATCTGCCTGATTATACCTGCGTGCAAGTGGATAAAGATAAG
AGTGGTGAGATTTTGGCCAACAAGTTCAATCCGAGAGTGATCTCAACCAATGATTCTGAG
CAGCCTGAGGGTGGTGATGCGAAGAAGGCTGGAAGCAACAAGGTAATGCAGGGTCTGGGA
AACAAGCAGACAAAAGAAAATGATGATGTTCAACCTGAGACCATGGAACTAACTTTTCAG
GAAATCGCTAGTCAGAATGCATTAACTAACTCTTCAGTCTCTATGGTGCGGTCGTTGCAT
AATAATTTTGAGCACTTTGAGGAAGGTGTCGTGAAGAAGGATGGAACTGATAAGGTAGCA
GTGGGTACGGGAAACAGCCTGACTAAAGCAAATGATGCTGAATTAGAAACTATGGAACTG
AATTTTCAGGAAGATGCTACTCTGAATGGGTTAACCACTTTCTCGCTGTCTACGGTGCAA
CCATCTCATAGTGCTTTTGAGCACCCTGAGAGTGATGACATGAAGAAGGATGGGAATAAC
CAGCAAGCAGTTTGTCCTGGGTACAGCCTGACTAAAGCAAATAATGATGTGGAATCTGAG
ACTATGGAGTTCATTCTTCAGCAAAATGCTACTCGAGATCGGCTAGCTGGCTTTTCAGAG
CCTATGGTGCAATCATTCCACAACTCTACTGGCATTCTTTCAGGATCTAGTAAGGACAAT
GACGAAGTTTCTGCTATTGGTCAGAATCTGGATAATGGAACAGGATTTGAGGAGCTTAGG
CTGGATGAGATAGAACATTTTGAATACAGCTTTGATGGTGGTCATGAATCTTCATCTTTA
CCCGCAACTTCTATTGGATTGGGTAATGATGCAAGGATGGAAGAGGCTTTTGCATCGGTT
GGATTTGATTCTGGAGGAATCATCTTAAACATGGAAGAATTGAATCAACTTTCAACAGTA
TGTGTGTGGTGCAGAGCAGAATTCAAGCTTGAAGCTTATGATACTGAAGCTCATTCAGAT
TCAATTGGATTTATGTGTCCAGACTGCAAGACTAAAATATCTGGACATCTGGAGAGTGTG
TTTCCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400022216
PEP Infomation

pacid=37438499 transcript=PGSC0003DMT400032690 locus=PGSC0003DMG400012552 ID=PGSC0003DMT400032690.v4.03 annot-version=v4.03
Sequence

MATVAPNCGPKLEAVAHIDIGKLSQSELHALSLCSDSAYDLRHTNEVVIPQIDRSLFNES
AGSRRQTYSRLRHQHHRSRVPGLHPSTSQPKPPFTSDPENHAILHFLKFFIRNPNSQSPP
PVPPPPITQPATSGIQENTLLLMNEPDKKRKRGRKPKDNKKLKENGVEIVNKNGEVVDLN
NLENNGDKLYSGELEKRTVRLQTEEEVLGFVRDLEGQWCSRRKKRKYVDASGFGDTLPIG
WKLLLALRRRDGRVWVYCRRIVSPTGQQFISCKEASSYLRSHFLSSEANQPAQQVDDAVA
KSVINFHSDTSLVLSTDIQENPHSLQKGDVAKHAVVAHAVVPSSSTLDLHLSEVCLMEMD
NLPEVKVQDIFECYKCNLMFEEKNAYLQHLFSFHQRTTKRYRVGPSVSDGVIIRDGKYEC
QFCHKVFEERRSYNGHVGVHVRNNARGTVDIAAAVAADKGVQSPHHDELLSRTCKMDALI
EIAQNAVVETSSARPATKDSSMPSSTLMDLDGNMATNIDQVARSNTDTGLSDTKEFKAET
CLEQDRNLPDYTCVQVDKDKSGEILANKFNPRVISTNDSEQPEGGDAKKAGSNKVMQGLG
NKQTKENDDVQPETMELTFQEIASQNALTNSSVSMVRSLHNNFEHFEEGVVKKDGTDKVA
VGTGNSLTKANDAELETMELNFQEDATLNGLTTFSLSTVQPSHSAFEHPESDDMKKDGNN
QQAVCPGYSLTKANNDVESETMEFILQQNATRDRLAGFSEPMVQSFHNSTGILSGSSKDN
DEVSAIGQNLDNGTGFEELRLDEIEHFEYSFDGGHESSSLPATSIGLGNDARMEEAFASV
GFDSGGIILNMEELNQLSTVCVWCRAEFKLEAYDTEAHSDSIGFMCPDCKTKISGHLESV
FP*

Transcript Sequence

Transcript ID

PGSC0003DMT400032690
Transcript Infomation

pacid=37438499 locus=PGSC0003DMG400012552 ID=PGSC0003DMT400032690.v4.03 annot-version=v4.03
Sequence

ATGGCGACAGTTGCACCGAATTGTGGCCCAAAGTTGGAAGCGGTGGCTCACATAGACATC
GGTAAACTTTCCCAATCTGAACTCCACGCACTTTCCCTTTGCTCCGACTCCGCTTACGAT
CTCCGGCATACTAACGAAGTCGTTATTCCCCAAATTGACCGGTCCCTCTTCAATGAATCC
GCCGGAAGCCGTCGTCAAACCTATTCCCGTCTCCGTCACCAACACCACCGTTCTCGCGTG
CCCGGTCTTCATCCTTCAACTTCACAACCCAAACCCCCTTTTACTTCCGACCCTGAAAAC
CACGCAATTCTTCATTTTCTTAAGTTCTTTATTCGTAATCCCAATTCCCAATCTCCACCG
CCTGTTCCTCCTCCTCCTATTACACAACCGGCTACTTCCGGGATTCAAGAAAATACCCTA
CTTTTGATGAATGAACCTGACAAAAAGAGGAAGAGAGGACGGAAACCTAAGGATAACAAG
AAGCTGAAAGAGAATGGGGTGGAAATTGTGAATAAAAACGGTGAGGTGGTGGATTTAAAC
AATTTGGAGAATAATGGGGATAAATTATACAGTGGAGAATTGGAGAAAAGGACTGTTAGG
TTACAGACTGAAGAAGAGGTACTCGGTTTTGTTAGGGATTTGGAGGGGCAGTGGTGTAGC
AGAAGGAAGAAGAGGAAATATGTTGATGCTAGTGGGTTTGGTGATACATTGCCTATTGGT
TGGAAGCTCTTGCTAGCCCTACGTAGACGGGATGGTCGCGTCTGGGTTTATTGTCGTAGA
ATTGTGAGCCCTACTGGTCAACAGTTTATATCATGCAAAGAGGCTTCATCATATTTGCGG
TCCCATTTTTTGTCTAGTGAAGCAAACCAGCCAGCTCAGCAGGTTGATGACGCTGTTGCT
AAAAGTGTGATTAACTTCCACAGTGATACCAGTTTGGTTTTGTCAACAGACATCCAAGAA
AATCCTCATTCGCTTCAAAAAGGTGATGTGGCAAAGCATGCCGTAGTTGCACATGCAGTT
GTACCCAGTTCATCTACTCTAGACCTACATCTGAGTGAAGTTTGCTTGATGGAGATGGAT
AATCTCCCTGAGGTTAAAGTTCAAGACATTTTTGAATGTTATAAATGTAACTTGATGTTT
GAAGAAAAGAATGCATATTTGCAGCATCTGTTCTCATTTCACCAGCGGACCACAAAAAGG
TACAGGGTTGGGCCATCTGTTAGTGATGGGGTCATAATTAGAGATGGAAAATATGAATGC
CAGTTCTGCCATAAGGTGTTTGAAGAACGGCGTAGTTACAATGGTCATGTAGGAGTCCAT
GTGAGAAACAATGCAAGAGGAACTGTGGATATAGCTGCTGCTGTTGCAGCAGACAAGGGT
GTTCAATCTCCACATCATGATGAGTTGCTTTCAAGGACATGTAAAATGGATGCTTTAATT
GAAATTGCCCAAAATGCAGTTGTAGAAACTTCTAGTGCTAGACCTGCGACCAAGGACAGC
AGCATGCCATCTAGTACTTTAATGGACTTGGATGGAAATATGGCTACCAACATTGACCAA
GTTGCGAGGTCAAACACTGATACTGGATTGTCAGATACCAAGGAATTTAAGGCTGAAACA
TGTCTTGAACAAGACAGAAATCTGCCTGATTATACCTGCGTGCAAGTGGATAAAGATAAG
AGTGGTGAGATTTTGGCCAACAAGTTCAATCCGAGAGTGATCTCAACCAATGATTCTGAG
CAGCCTGAGGGTGGTGATGCGAAGAAGGCTGGAAGCAACAAGGTAATGCAGGGTCTGGGA
AACAAGCAGACAAAAGAAAATGATGATGTTCAACCTGAGACCATGGAACTAACTTTTCAG
GAAATCGCTAGTCAGAATGCATTAACTAACTCTTCAGTCTCTATGGTGCGGTCGTTGCAT
AATAATTTTGAGCACTTTGAGGAAGGTGTCGTGAAGAAGGATGGAACTGATAAGGTAGCA
GTGGGTACGGGAAACAGCCTGACTAAAGCAAATGATGCTGAATTAGAAACTATGGAACTG
AATTTTCAGGAAGATGCTACTCTGAATGGGTTAACCACTTTCTCGCTGTCTACGGTGCAA
CCATCTCATAGTGCTTTTGAGCACCCTGAGAGTGATGACATGAAGAAGGATGGGAATAAC
CAGCAAGCAGTTTGTCCTGGGTACAGCCTGACTAAAGCAAATAATGATGTGGAATCTGAG
ACTATGGAGTTCATTCTTCAGCAAAATGCTACTCGAGATCGGCTAGCTGGCTTTTCAGAG
CCTATGGTGCAATCATTCCACAACTCTACTGGCATTCTTTCAGGATCTAGTAAGGACAAT
GACGAAGTTTCTGCTATTGGTCAGAATCTGGATAATGGAACAGGATTTGAGGAGCTTAGG
CTGGATGAGATAGAACATTTTGAATACAGCTTTGATGGTGGTCATGAATCTTCATCTTTA
CCCGCAACTTCTATTGGATTGGGTAATGATGCAAGGATGGAAGAGGCTTTTGCATCGGTT
GGATTTGATTCTGGAGGAATCATCTTAAACATGGAAGAATTGAATCAACTTTCAACAGTA
TGTGTGTGGTGCAGAGCAGAATTCAAGCTTGAAGCTTATGATACTGAAGCTCATTCAGAT
TCAATTGGATTTATGTGTCCAGACTGCAAGACTAAAATATCTGGACATCTGGAGAGTGTG
TTTCCTTGA