Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032670
CDS Infomation

pacid=37441544 polypeptide=PGSC0003DMP400022199 locus=PGSC0003DMG400012547 ID=PGSC0003DMT400032670.v4.03 annot-version=v4.03
Sequence

ATGTCTGAAATTGTTCCACAAAATGGAGAGGTTTTTTTGACGTGGGAAGATTTGTGGGTG
ACGGCTTCAAGCTTGAAAGATGGTAACAAAGCCATTCTTAAAGGTTTAACAGGCTATGCA
AGGCCTGGTGAGCTCTTGGCTATCATGGGCCCTTCTGGCTGTGGCAAATCTACACTTCTC
GACACAATTGCCGGGAGATTGGGATCGAGCACAAGGCAGAGTGGAGATATTATAATCAAT
GGTCGCAAACAAACACTGGCTTATGGAACCTCTGCCTATGTGACTCAAGAAGATACTCTA
ATGGCAACTCTCACAGTAAAAGAAGCTGTATACTACTCTGCTGAACTCCAACTCCCAAAT
TCCATGCCAAAATCAGAGAAAAAACAAATAGCAGACATGACTATGAAGGAAATGGGATTG
CAGGATGCAATGGAAACAAGAATTGGAGGATGGATTGGAAAAGGAATTAGCGGAGGACAA
AAAAGGAGAGTCAGTATATGCTTAGAGATTTTAACGCGCCCAAAACTTCTCTTTCTTGAT
GAACCAACTAGTGGACTTGATAGCGCCGCGTCTTATTATGTCATGAAAACAATTGCAAGC
CAATGTCAGGGGAGAACAATTATTGCCTCAATTCATCAACCTAGCACTGAAGTTTTCAGT
CTATTTCATTCTTTATGTCTTTTGTCTTCTGGAAGAACTGTCTACTTTGGCCCTGCTAGT
GCAGCAATTGAGTTTTTTGCATTGAGTGGTTATCCTTGCCCGACGCTCCAGAATCCATCT
GATCATTTTCTCAAAACAATTAACAGTGATTTTGATCAGGACATTGAAGAAGGTCCAACT
AGTAGGAAATCAACAGAAGAGGTGATTAATATCCTGATAAAGTCGTATAGTGATTCTGAT
AAGTACAGAGCAGTTCAAAGTCAAGTTGCTGAAATCTGCAAACAGGAAGGTGAAGTACTG
GAGAAAAGAAGCCGTGCCAGCTTCACAACTCAAAGCCTTGTTTTGACAAAAAGGTCATTT
GTGAACATGTCCCGTGATCTTGGTTACTACTGGCTGCGCTTAGGTGTTTATATTGTAATA
GCTGTAGGTCTTGGCACTATCTACTATGATGTTGGCTTTTCTTACACTTCGATTCAGTCA
AGAGGTTCCATGCTTATGTTTGTGGCGACATTCATCACTTTTATGGCGATTGGTGGATTC
TCCTCTTTTGTGGAAGAACTCAAGGTATTTCAACGAGAGAAACTAAACGGTCATTATGGT
TCTGGTTCATTTGTCATTGCCAATACACTTTCTGCTCTGCCATACTTGGTATTGGTATCT
TTTATCCCAGGAGCTATCGCGTATTTCCTCACTGGACTACAAGGTGGATTCGAGCATTTC
ATGTGCTTTGCACTAGTCCTCTTCACGTGTATGATGTTAGTTGAGAGCCTAATGATGATT
GTAGCAAGCATTGTGCCTAATTTTCTCATGGGATTAATAAGTGGAGCAGGAATACAAGCA
CTTATGTGCTTAAGTGGAGGATTCTTTCGATTACCAAATGATTTGCCTAGGGTATTCTGG
AAGTACCCTTTACACTACGTTGCATTTCATAAGTATGCTTACCAAGGGCTGTTCAAGAAC
GAGTTTGAAGGACTAAAAATTCATGACGAGAACATGAAAGGTTTGATCAAAGGGGAAGAT
ATTCTGAAATATAAATGGGAAATGGATATAGATTACTCAAAGTGGGTGGATCTTGCCATT
TTACTGGGGATGATAATTTTATACAGGCTATTGTTCTTGCTGTTTGTCAAGGCTGGTGAA
AAGGTTAAGCCAGCTGTAAGAGCAATCATGTCTAACTCACCTAAACAAATCAATTCAGCA
GAAACACCTTTGCATGAATTTTCTGCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400022199
PEP Infomation

pacid=37441544 transcript=PGSC0003DMT400032670 locus=PGSC0003DMG400012547 ID=PGSC0003DMT400032670.v4.03 annot-version=v4.03
Sequence

MSEIVPQNGEVFLTWEDLWVTASSLKDGNKAILKGLTGYARPGELLAIMGPSGCGKSTLL
DTIAGRLGSSTRQSGDIIINGRKQTLAYGTSAYVTQEDTLMATLTVKEAVYYSAELQLPN
SMPKSEKKQIADMTMKEMGLQDAMETRIGGWIGKGISGGQKRRVSICLEILTRPKLLFLD
EPTSGLDSAASYYVMKTIASQCQGRTIIASIHQPSTEVFSLFHSLCLLSSGRTVYFGPAS
AAIEFFALSGYPCPTLQNPSDHFLKTINSDFDQDIEEGPTSRKSTEEVINILIKSYSDSD
KYRAVQSQVAEICKQEGEVLEKRSRASFTTQSLVLTKRSFVNMSRDLGYYWLRLGVYIVI
AVGLGTIYYDVGFSYTSIQSRGSMLMFVATFITFMAIGGFSSFVEELKVFQREKLNGHYG
SGSFVIANTLSALPYLVLVSFIPGAIAYFLTGLQGGFEHFMCFALVLFTCMMLVESLMMI
VASIVPNFLMGLISGAGIQALMCLSGGFFRLPNDLPRVFWKYPLHYVAFHKYAYQGLFKN
EFEGLKIHDENMKGLIKGEDILKYKWEMDIDYSKWVDLAILLGMIILYRLLFLLFVKAGE
KVKPAVRAIMSNSPKQINSAETPLHEFSA*

Transcript Sequence

Transcript ID

PGSC0003DMT400032670
Transcript Infomation

pacid=37441544 locus=PGSC0003DMG400012547 ID=PGSC0003DMT400032670.v4.03 annot-version=v4.03
Sequence

ATGTCTGAAATTGTTCCACAAAATGGAGAGGTTTTTTTGACGTGGGAAGATTTGTGGGTG
ACGGCTTCAAGCTTGAAAGATGGTAACAAAGCCATTCTTAAAGGTTTAACAGGCTATGCA
AGGCCTGGTGAGCTCTTGGCTATCATGGGCCCTTCTGGCTGTGGCAAATCTACACTTCTC
GACACAATTGCCGGGAGATTGGGATCGAGCACAAGGCAGAGTGGAGATATTATAATCAAT
GGTCGCAAACAAACACTGGCTTATGGAACCTCTGCCTATGTGACTCAAGAAGATACTCTA
ATGGCAACTCTCACAGTAAAAGAAGCTGTATACTACTCTGCTGAACTCCAACTCCCAAAT
TCCATGCCAAAATCAGAGAAAAAACAAATAGCAGACATGACTATGAAGGAAATGGGATTG
CAGGATGCAATGGAAACAAGAATTGGAGGATGGATTGGAAAAGGAATTAGCGGAGGACAA
AAAAGGAGAGTCAGTATATGCTTAGAGATTTTAACGCGCCCAAAACTTCTCTTTCTTGAT
GAACCAACTAGTGGACTTGATAGCGCCGCGTCTTATTATGTCATGAAAACAATTGCAAGC
CAATGTCAGGGGAGAACAATTATTGCCTCAATTCATCAACCTAGCACTGAAGTTTTCAGT
CTATTTCATTCTTTATGTCTTTTGTCTTCTGGAAGAACTGTCTACTTTGGCCCTGCTAGT
GCAGCAATTGAGTTTTTTGCATTGAGTGGTTATCCTTGCCCGACGCTCCAGAATCCATCT
GATCATTTTCTCAAAACAATTAACAGTGATTTTGATCAGGACATTGAAGAAGGTCCAACT
AGTAGGAAATCAACAGAAGAGGTGATTAATATCCTGATAAAGTCGTATAGTGATTCTGAT
AAGTACAGAGCAGTTCAAAGTCAAGTTGCTGAAATCTGCAAACAGGAAGGTGAAGTACTG
GAGAAAAGAAGCCGTGCCAGCTTCACAACTCAAAGCCTTGTTTTGACAAAAAGGTCATTT
GTGAACATGTCCCGTGATCTTGGTTACTACTGGCTGCGCTTAGGTGTTTATATTGTAATA
GCTGTAGGTCTTGGCACTATCTACTATGATGTTGGCTTTTCTTACACTTCGATTCAGTCA
AGAGGTTCCATGCTTATGTTTGTGGCGACATTCATCACTTTTATGGCGATTGGTGGATTC
TCCTCTTTTGTGGAAGAACTCAAGGTATTTCAACGAGAGAAACTAAACGGTCATTATGGT
TCTGGTTCATTTGTCATTGCCAATACACTTTCTGCTCTGCCATACTTGGTATTGGTATCT
TTTATCCCAGGAGCTATCGCGTATTTCCTCACTGGACTACAAGGTGGATTCGAGCATTTC
ATGTGCTTTGCACTAGTCCTCTTCACGTGTATGATGTTAGTTGAGAGCCTAATGATGATT
GTAGCAAGCATTGTGCCTAATTTTCTCATGGGATTAATAAGTGGAGCAGGAATACAAGCA
CTTATGTGCTTAAGTGGAGGATTCTTTCGATTACCAAATGATTTGCCTAGGGTATTCTGG
AAGTACCCTTTACACTACGTTGCATTTCATAAGTATGCTTACCAAGGGCTGTTCAAGAAC
GAGTTTGAAGGACTAAAAATTCATGACGAGAACATGAAAGGTTTGATCAAAGGGGAAGAT
ATTCTGAAATATAAATGGGAAATGGATATAGATTACTCAAAGTGGGTGGATCTTGCCATT
TTACTGGGGATGATAATTTTATACAGGCTATTGTTCTTGCTGTTTGTCAAGGCTGGTGAA
AAGGTTAAGCCAGCTGTAAGAGCAATCATGTCTAACTCACCTAAACAAATCAATTCAGCA
GAAACACCTTTGCATGAATTTTCTGCTTAA