Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032641
CDS Infomation

pacid=37439284 polypeptide=PGSC0003DMP400022177 locus=PGSC0003DMG400012539 ID=PGSC0003DMT400032641.v4.03 annot-version=v4.03
Sequence

ATGGCCAAGTTAGAGATTCAAATCCAGATGAGGAAAATGATTAAGCCTTCAACACCTACC
CCGAATCATCTCCGGAGCCTCAAGCTTTCATTTTTTGATCAGGGGGCTCCTCGTTTATAT
GTACCAATATTGTTCCATTACTTGCCAACAGGTGAATGCAACAGGGAATTAGGAATTATT
GAAAAATGTGAAAAGCTGCAAAACTCTTTGGCTGAGACGTTAACCAGTTTTTACCCTCTA
GCTGGAAGATTTATGGAAGATAAATTCTTGATTCACTGCAATGATGTAGGTGTTGAGTAT
GTTGAATCCAAAGTCAATATGAATCTTGCTGAGTTTCTCCGTCGAGGACCCAAGATTGAG
CTTTTGGATGATCTTCTTCCTGAAATGGATCAGTCATCAAGTCCATTACTCGGTGTCCAA
GTGAACCTATTCAATTGTGGAGGACTAGTCATGGGGATACAAATTTCACACATCATAGCT
GATGCTTTCACTTTAGCAACATTTCTCAATGAATGGGCAAACACTAGCCTTACAGGGACC
ACAAAAGATTGTCTCCCAAGTTTCGGTCACTTGTCATCACTCTTCCCCCCAAGAGTGATA
TCTGCAGGGCCTCAATTTTCACTACCATCCATAGAAGGCCCTAAGATTATCACAAAGAGG
TTTGTGTTTGATGCTTTTGCAATAGCAAACCTCAAAGACAGAATCAATCCGAGTACTGCC
ATATTCACTCGAGTGGTAGTCGTTATGTCATTAATATGGAAAGTTCTTATGGGGATTTCA
TCAGCCAAACATGGACATTCAAGGGACTCGTCTTTTGTATTTCCTATTAATTTGAGGGGA
AAATCAAAGTTATCATCGTTGGAACATGCTCAAGGGAATTTCTATGTGACTGTAGCTGCT
ACTCTTGAGGCAAACGAGATGAGAAGAGAGTTACATGAGTTTGTTAACGCTATAGGAAGT
ACAGCAAGGAACACATCTCTCAGCATTGGTAAGGCGGCAAGCGTAGATGAAATTATGTCT
CTGTCCATTAACTGTGGCACAGAAATCATTAACAAATTTGTTCAAGGAGACGCGATAGAC
ATTTATCCGAGTACTAGTTGGTGTAGATTTCCCTGGTACGAAGCGGACTTTGGTTGGGGA
AAGCCAATGTGGGTAAGCAGCGTTGGCAAAACATTTGAAGTAATTAGTCTGTTTGATACA
AAAGATGGCGATGGAATAGAAGCATGGGTTAGTTTGAAGGAGAATGACATGCTTGAATTC
GAAAGAGACACACAAATTTTGGCCTCAACAGCATTTGATTCTTCGATTTGGATAAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400022177
PEP Infomation

pacid=37439284 transcript=PGSC0003DMT400032641 locus=PGSC0003DMG400012539 ID=PGSC0003DMT400032641.v4.03 annot-version=v4.03
Sequence

MAKLEIQIQMRKMIKPSTPTPNHLRSLKLSFFDQGAPRLYVPILFHYLPTGECNRELGII
EKCEKLQNSLAETLTSFYPLAGRFMEDKFLIHCNDVGVEYVESKVNMNLAEFLRRGPKIE
LLDDLLPEMDQSSSPLLGVQVNLFNCGGLVMGIQISHIIADAFTLATFLNEWANTSLTGT
TKDCLPSFGHLSSLFPPRVISAGPQFSLPSIEGPKIITKRFVFDAFAIANLKDRINPSTA
IFTRVVVVMSLIWKVLMGISSAKHGHSRDSSFVFPINLRGKSKLSSLEHAQGNFYVTVAA
TLEANEMRRELHEFVNAIGSTARNTSLSIGKAASVDEIMSLSINCGTEIINKFVQGDAID
IYPSTSWCRFPWYEADFGWGKPMWVSSVGKTFEVISLFDTKDGDGIEAWVSLKENDMLEF
ERDTQILASTAFDSSIWIK*

Transcript Sequence

Transcript ID

PGSC0003DMT400032641
Transcript Infomation

pacid=37439284 locus=PGSC0003DMG400012539 ID=PGSC0003DMT400032641.v4.03 annot-version=v4.03
Sequence

ATGGCCAAGTTAGAGATTCAAATCCAGATGAGGAAAATGATTAAGCCTTCAACACCTACC
CCGAATCATCTCCGGAGCCTCAAGCTTTCATTTTTTGATCAGGGGGCTCCTCGTTTATAT
GTACCAATATTGTTCCATTACTTGCCAACAGGTGAATGCAACAGGGAATTAGGAATTATT
GAAAAATGTGAAAAGCTGCAAAACTCTTTGGCTGAGACGTTAACCAGTTTTTACCCTCTA
GCTGGAAGATTTATGGAAGATAAATTCTTGATTCACTGCAATGATGTAGGTGTTGAGTAT
GTTGAATCCAAAGTCAATATGAATCTTGCTGAGTTTCTCCGTCGAGGACCCAAGATTGAG
CTTTTGGATGATCTTCTTCCTGAAATGGATCAGTCATCAAGTCCATTACTCGGTGTCCAA
GTGAACCTATTCAATTGTGGAGGACTAGTCATGGGGATACAAATTTCACACATCATAGCT
GATGCTTTCACTTTAGCAACATTTCTCAATGAATGGGCAAACACTAGCCTTACAGGGACC
ACAAAAGATTGTCTCCCAAGTTTCGGTCACTTGTCATCACTCTTCCCCCCAAGAGTGATA
TCTGCAGGGCCTCAATTTTCACTACCATCCATAGAAGGCCCTAAGATTATCACAAAGAGG
TTTGTGTTTGATGCTTTTGCAATAGCAAACCTCAAAGACAGAATCAATCCGAGTACTGCC
ATATTCACTCGAGTGGTAGTCGTTATGTCATTAATATGGAAAGTTCTTATGGGGATTTCA
TCAGCCAAACATGGACATTCAAGGGACTCGTCTTTTGTATTTCCTATTAATTTGAGGGGA
AAATCAAAGTTATCATCGTTGGAACATGCTCAAGGGAATTTCTATGTGACTGTAGCTGCT
ACTCTTGAGGCAAACGAGATGAGAAGAGAGTTACATGAGTTTGTTAACGCTATAGGAAGT
ACAGCAAGGAACACATCTCTCAGCATTGGTAAGGCGGCAAGCGTAGATGAAATTATGTCT
CTGTCCATTAACTGTGGCACAGAAATCATTAACAAATTTGTTCAAGGAGACGCGATAGAC
ATTTATCCGAGTACTAGTTGGTGTAGATTTCCCTGGTACGAAGCGGACTTTGGTTGGGGA
AAGCCAATGTGGGTAAGCAGCGTTGGCAAAACATTTGAAGTAATTAGTCTGTTTGATACA
AAAGATGGCGATGGAATAGAAGCATGGGTTAGTTTGAAGGAGAATGACATGCTTGAATTC
GAAAGAGACACACAAATTTTGGCCTCAACAGCATTTGATTCTTCGATTTGGATAAAATGA