Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032620
CDS Infomation

pacid=37468489 polypeptide=PGSC0003DMP400022159 locus=PGSC0003DMG400012523 ID=PGSC0003DMT400032620.v4.03 annot-version=v4.03
Sequence

ATGGTGTCTTTTGGGAAAAAGTTGAAGGGAAGACAAATCCAAGAATGGCAAGGATACTAT
ATCAATTACAAATTGATGAAGAGGAAGCTTAAGCAATATGCTAACCAAAGCCAAGCCGTA
GTACCAGATCGTCGATTTGTTCTTAAGGATTTCTCCAGAATGCTAGACCACCAGATCGAA
ACAATAGTTCTCTTTTTGTTGGAACAACAAGGAGCTCTTGCGAGCAGAATATCTGAACTT
AATGAACAGAAAGATTCTCTTCAAGAGGTGCCTGATATATCAAAAATAGACGAGTTGCGG
GAAGTTTATCAAGCTGTGGGGCGTGATCTTCTAAAGCTTCTCTATTTCGTTGAAATAAAT
GCTATTGGATTGCGGAAGATACTTAAAAAGTTTGACAAACGTTTTGGCTATAAGTTCACT
GATTATTATGTCAAAACCCGGGCTAACCATCCCTATTCCCAACTTCAGCAAGTATTCAAG
CACGTGGGATTAGGGGCAGTTGTTGGAGCAATATCTCGTAATCTTGCAGATCTTCAAGAC
CGTCAGGGAAGCTACTTGTCAATTTATGACCAGCCAGCTCTTCCCCTCCAGGATCCTGTG
GTTGACTCGATGCAAGCAGCTGTCGATAGATTAAGTCATTCGACAAACTTTCTTAACTTT
TTGGCCCAACATGCACTTATTATGCAAGAGGAGTTACCCGCTCCTGTCGAGGAAGGAGTT
GATGATCAGAGATACCATTTTATGTCGCTCCTGTTGAACTTGGCAAATACTTTCCTTTAC
ATGGTCAATACATACATTATTGTACCAACAGCAGATGATTATTCTATGAGCCTTGGTGCG
GCTGCAACGGTTTGTGGGATTGTGATTGGAGCCATGGCTGTCGCACAGATCTTCTCGTCC
GTGTATTTCAGTGCTTGGTCGAACAGGTCTTATTTCAGACCTCTGATATTCAGCAGTATA
GTTCTTTTTATCGGGAATGTCATGTATGCATTGGCTTATGATCTCAATTCAATACCAGTT
CTGCTTATCGGTCGTCTATTTTGCGGTTTTGGTTCCGCCAGAGCAGTGAACCGTCGCTAC
ATCAGTGACTGTGTACCACTTAAATACCGGATGCAGGCTTCAGCGGGTTTCGTTAGTGCT
AGCGCTCTTGGAATGGCATGTGGACCTGCAGTTGCCGGCTTACTGCAGACGAATTTTAAG
ATTTACAAGATAACCGTCAATAAAGAAACTTTGCCTGGTTGGCTTATGGCTATTGCATGG
CTCATTTATTTGGTATGGCTGTGGTTCTCTTTTAAAGAACCTGTGCGTGATACTGAAATA
AAAAATGTTCCTCAAGAGTCTAAGGCCGAACCTGATTCCCTTGAAAAAGGCATTGTGGAA
CCATTGCTGTTAAAATCACCGGAGAATCAACAAGATGAGGATGAACAAGAAGGTGACGAG
AGTGAAGAAGCTCCCGAGGACTCTCATAAACCTGCTAATTCTATAGTAGCAGCATACAGA
TTGCTCACTCCTTCTGTGAAAGTTCAATTGTTAATCTATTTTATGCTGAAATATGCTATG
GAGATTTTACTTTCAGAATCCAGTGTCATCACGACATATTACTTTAGCTGGTCAACAGGC
CATGTGGCAGTTTTTCTTGCGTGTCTTGGCCTCACGGTTCTTCCAGTAAATCTTGTTGTT
GGGAGCTATATAACTAACATGTTCGAGGACAGGCAAATTCTATTGGCATCTGAAATTATG
GTTTGTGTTGGTATACTGATGAGCTTTAATGTTATAATCCCGTATTCTGTGCCACAGTAT
GTCTGCTCGGGGCTCTTATTATTTGTATCTGCTGAAGTGTTAGAAGGTGTAAATTTGTCA
CTCCTCTCGCGAGTCATGTCATCTAGGCTTTCTCGTGGAACCTACAATGGTGGTCTCTTG
TCTACAGAAGCCGGAACCATTGCTCGGGTGATTGCAGATGCAACTATAACTCTCGCTGGG
TACTTGGGGGAGAGTATGCTCTTGAATATTACTCTTCTCCCTTCGCTCTTCATATGCATT
GTGTCCATTCTCGCCACCTTTTGGACCTACAATTCTCTCTATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400022159
PEP Infomation

pacid=37468489 transcript=PGSC0003DMT400032620 locus=PGSC0003DMG400012523 ID=PGSC0003DMT400032620.v4.03 annot-version=v4.03
Sequence

MVSFGKKLKGRQIQEWQGYYINYKLMKRKLKQYANQSQAVVPDRRFVLKDFSRMLDHQIE
TIVLFLLEQQGALASRISELNEQKDSLQEVPDISKIDELREVYQAVGRDLLKLLYFVEIN
AIGLRKILKKFDKRFGYKFTDYYVKTRANHPYSQLQQVFKHVGLGAVVGAISRNLADLQD
RQGSYLSIYDQPALPLQDPVVDSMQAAVDRLSHSTNFLNFLAQHALIMQEELPAPVEEGV
DDQRYHFMSLLLNLANTFLYMVNTYIIVPTADDYSMSLGAAATVCGIVIGAMAVAQIFSS
VYFSAWSNRSYFRPLIFSSIVLFIGNVMYALAYDLNSIPVLLIGRLFCGFGSARAVNRRY
ISDCVPLKYRMQASAGFVSASALGMACGPAVAGLLQTNFKIYKITVNKETLPGWLMAIAW
LIYLVWLWFSFKEPVRDTEIKNVPQESKAEPDSLEKGIVEPLLLKSPENQQDEDEQEGDE
SEEAPEDSHKPANSIVAAYRLLTPSVKVQLLIYFMLKYAMEILLSESSVITTYYFSWSTG
HVAVFLACLGLTVLPVNLVVGSYITNMFEDRQILLASEIMVCVGILMSFNVIIPYSVPQY
VCSGLLLFVSAEVLEGVNLSLLSRVMSSRLSRGTYNGGLLSTEAGTIARVIADATITLAG
YLGESMLLNITLLPSLFICIVSILATFWTYNSLY*

Transcript Sequence

Transcript ID

PGSC0003DMT400032620
Transcript Infomation

pacid=37468489 locus=PGSC0003DMG400012523 ID=PGSC0003DMT400032620.v4.03 annot-version=v4.03
Sequence

ATGGTGTCTTTTGGGAAAAAGTTGAAGGGAAGACAAATCCAAGAATGGCAAGGATACTAT
ATCAATTACAAATTGATGAAGAGGAAGCTTAAGCAATATGCTAACCAAAGCCAAGCCGTA
GTACCAGATCGTCGATTTGTTCTTAAGGATTTCTCCAGAATGCTAGACCACCAGATCGAA
ACAATAGTTCTCTTTTTGTTGGAACAACAAGGAGCTCTTGCGAGCAGAATATCTGAACTT
AATGAACAGAAAGATTCTCTTCAAGAGGTGCCTGATATATCAAAAATAGACGAGTTGCGG
GAAGTTTATCAAGCTGTGGGGCGTGATCTTCTAAAGCTTCTCTATTTCGTTGAAATAAAT
GCTATTGGATTGCGGAAGATACTTAAAAAGTTTGACAAACGTTTTGGCTATAAGTTCACT
GATTATTATGTCAAAACCCGGGCTAACCATCCCTATTCCCAACTTCAGCAAGTATTCAAG
CACGTGGGATTAGGGGCAGTTGTTGGAGCAATATCTCGTAATCTTGCAGATCTTCAAGAC
CGTCAGGGAAGCTACTTGTCAATTTATGACCAGCCAGCTCTTCCCCTCCAGGATCCTGTG
GTTGACTCGATGCAAGCAGCTGTCGATAGATTAAGTCATTCGACAAACTTTCTTAACTTT
TTGGCCCAACATGCACTTATTATGCAAGAGGAGTTACCCGCTCCTGTCGAGGAAGGAGTT
GATGATCAGAGATACCATTTTATGTCGCTCCTGTTGAACTTGGCAAATACTTTCCTTTAC
ATGGTCAATACATACATTATTGTACCAACAGCAGATGATTATTCTATGAGCCTTGGTGCG
GCTGCAACGGTTTGTGGGATTGTGATTGGAGCCATGGCTGTCGCACAGATCTTCTCGTCC
GTGTATTTCAGTGCTTGGTCGAACAGGTCTTATTTCAGACCTCTGATATTCAGCAGTATA
GTTCTTTTTATCGGGAATGTCATGTATGCATTGGCTTATGATCTCAATTCAATACCAGTT
CTGCTTATCGGTCGTCTATTTTGCGGTTTTGGTTCCGCCAGAGCAGTGAACCGTCGCTAC
ATCAGTGACTGTGTACCACTTAAATACCGGATGCAGGCTTCAGCGGGTTTCGTTAGTGCT
AGCGCTCTTGGAATGGCATGTGGACCTGCAGTTGCCGGCTTACTGCAGACGAATTTTAAG
ATTTACAAGATAACCGTCAATAAAGAAACTTTGCCTGGTTGGCTTATGGCTATTGCATGG
CTCATTTATTTGGTATGGCTGTGGTTCTCTTTTAAAGAACCTGTGCGTGATACTGAAATA
AAAAATGTTCCTCAAGAGTCTAAGGCCGAACCTGATTCCCTTGAAAAAGGCATTGTGGAA
CCATTGCTGTTAAAATCACCGGAGAATCAACAAGATGAGGATGAACAAGAAGGTGACGAG
AGTGAAGAAGCTCCCGAGGACTCTCATAAACCTGCTAATTCTATAGTAGCAGCATACAGA
TTGCTCACTCCTTCTGTGAAAGTTCAATTGTTAATCTATTTTATGCTGAAATATGCTATG
GAGATTTTACTTTCAGAATCCAGTGTCATCACGACATATTACTTTAGCTGGTCAACAGGC
CATGTGGCAGTTTTTCTTGCGTGTCTTGGCCTCACGGTTCTTCCAGTAAATCTTGTTGTT
GGGAGCTATATAACTAACATGTTCGAGGACAGGCAAATTCTATTGGCATCTGAAATTATG
GTTTGTGTTGGTATACTGATGAGCTTTAATGTTATAATCCCGTATTCTGTGCCACAGTAT
GTCTGCTCGGGGCTCTTATTATTTGTATCTGCTGAAGTGTTAGAAGGTGTAAATTTGTCA
CTCCTCTCGCGAGTCATGTCATCTAGGCTTTCTCGTGGAACCTACAATGGTGGTCTCTTG
TCTACAGAAGCCGGAACCATTGCTCGGGTGATTGCAGATGCAACTATAACTCTCGCTGGG
TACTTGGGGGAGAGTATGCTCTTGAATATTACTCTTCTCCCTTCGCTCTTCATATGCATT
GTGTCCATTCTCGCCACCTTTTGGACCTACAATTCTCTCTATTGA