Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032562
CDS Infomation

pacid=37468865 polypeptide=PGSC0003DMP400022127 locus=PGSC0003DMG400012505 ID=PGSC0003DMT400032562.v4.03 annot-version=v4.03
Sequence

ATGGCTTCGAATCCTCCATTTTTAGTGGAGGATCAGACGGATGAGGATTTTTTTGATAAA
TTGGTTAATGATGATGATGATGATGTTGGTTTTAAGGTAACTACATCGTCAACGGTTTTG
GGTGCGGGTGCGAGCTCGGTGTATGTTGATGGAAATGAATCTGATGAGGTTAAAGCCTTT
GCTGATTTCAGTATAAGTGATGATGTCGATAGTGGAGTTGAAACTGGGAAGAAGGAAGGG
GAGAAAGTAGATAAAGGTGCTGATAGCATTGCTAAACCGGGTTTGGTAGTTGAGGGGAAT
AGAGAGAACAGTAGTGGTTCTTTAGTGTCATTGACTTCTGGGATGTCAGATGGTTTACTC
GAACCCAGCAATGGTAATTTGGAGACTGAGGTAATTGATGGTATGACAGAGAATCAGACC
AGTGGATCGAGCAATTCGGGTGTGAAGGAAGTTGGATGGAGTGCTTTTCACGCTGATCCA
GGTACAAATGATGCTTCTGGGTTTGGATCCTACATGGACTTTTTCAGTGAATTGGGAGAT
AATAGCGGTGATGCAACGGGAAATGTCGGTGAGAATGTGAATAAGGGGTCAACTGTTTCG
CCAGCTGAACAGGTTCATGACACAAAACAAAATCATGAAACAGTGCATCTGGAGAATACT
AGCTCCTTAACACAGGGTCAAGATTGCTACGCCCATGATGCTACCACAGAACAAGTTGCA
GATGGACAGGATCTAAATAGTAGCCAGTATTGGGAAAATCTTTATCCAGGATGGAAGTAT
GACACAAATACCGGGCAATGGTATCAGGTTGATAGTTATGAATCAGGAGCTAATGTACAA
GGAAGTACTGATTCTAATTTGGTTTCTGATTGGTCAGTTTCTGATGGAACGCCAGAGGTC
TCGTACCTACAGAAAACTGCTCAGTCTGTATCTGGCAATGCAGCTGAGAGTGGTACGACT
GAGAGTGTCACTAATTGGAATCAGGTTTCGCAGGTAAATGATGCTACTGAGAATCTGGCA
AACTGGAATCAGGCTATGCAGGCGAGTGACCATAGGGGGACTGTGACTGACTGGAATCAG
GCGACACTGGCTAGTGATGCAGGTGTTGTCACAACTGACTGGAATCAGGCCTCACAACTT
AACAATGGGTATCCGTCGCATATGGTGTTTGATCCACAGTACCCTGGTTGGTATTATGAT
ACAATTGCACTTGAATGGCGCACTCTGGAGAGCTACACATCGTCTGCTCAATCAACTGTT
CAAGGTGAGAGCCAACTGGATCAGAGTGGTTTGGCTTCAGTGCAGACTTCCTCTCACAAT
AGTGATCAAAGGAATTATGGTGCATACGGGCACAATGACAATAGTAGATTCCAAGAGTTT
AGCAGCGGTGGAGGAGATTACAACTGGTCTGGCTCTTTTGGTAATTACAATCAGAATCAG
CATAGCTCAAATATATCGCAAAATGAAAATATTGCAAAAAGTAACACTGTGTCAGAATAT
AGGGGGAACCAACAATTAGAGAACAACTACAACCATGATTTTTCTGCAAGCAGCCATGTT
AATAGACAAATCTCTAATCATTATGAGGGAACAGTTCCATACAATGCAAACACAACTCAA
AGTCAAAATGACCAACGTTTTTTTTCTGGTGGGGGTTTGGGTCAGCAATTCAGTCAGCCA
ACACTCCAGCAACATGAACAGAAGCATGCCTCAAGTGATTACTATGGGACTCAGACCACA
GCCAATTATTCACAGCAAGCATTTCAGAGTAGCCAGCAGTTTGCTCATGCTCCCACTGCA
GGAAAATCATCTGCTGGCCGTCCACCACATGCTTTGGTCTCTTTTGGTTTTGGTGGAAAA
CTGATTGTGATGAAAGATCATAGTTCTTTTGGGAACTCATCCTTTGGAAGTCAGAATCCT
GTAGGAGGTTCAATATCTGTGCTCAGTTTGATGGATGTTGTCTCTGAGAGATTTGACAAT
TCAAGTCTTGTGGTGGGGGCATGTGACTATACCCGAGCTTTGTGCCAACAATCATTCCCT
GGTCCACTAGTTGGTGGAAGTCCCAGTATCAAGGAGTTGAATAAATGGATTGATGAGAGA
ATTGCAAACTCTGAATCTCCCGACTCGGATTACAGGAAAGGCGAAGTTTTGAGGTTACTT
CTGTCATTGCTAAAAATAGCATGTCAATATTATGGGAAACTCCGTTCTCCTTTTGGTACC
GATGCTGCGTTGAAGGAAAGTGATGTTCCAGAAACGGCGATAGCCAAATTGTTTGCATCT
GTGAAGAGGAATGGGATGCAAGTCAATCAATATGGCTCTCTCGCCCAGTGCTTGCAGCAA
TTGCCTTCTGAAGGACAGATGCAGGCGACAGCTGCTGAGGTTCAAAGTCTTCTAGTATCT
GGAAGAAAGAAAGAAGCATTACAATGTGCACAAGAGGGGCAGTTGTGGGGGCCAGCTCTT
ATTCTCGCTGCACAACTCGGTGATCAGTTCTATGTAGAAACGGTGAAGCAAATGGCACTT
CGACAGTTAGTAGCAGGGTCACCTTTGCGGACACTGTGCCTACTAATTGCTGGTCAACCG
GCTGATGTCTTTTCTCTAGATTCTAGAGCTCAAAGTGGCATGCCTGTTGTAAATGCGGTT
CAACAGCCTGCACAGTTTGGTGCCAATGTCATGCTGGATGACTGGGAAGAGAATTTGGCT
GTGATAACTGCAAACAGAACGAAGGATGATGAACTGGTGCTTATTCATCTTGGTGATTGT
TTGTGGAAAGAGAGGAGTGATATTGTTGCTGCACACATTTGCTATCTAGTGGCTGAAGCA
AACTTTGAACAATATTCAGATACCGCAAGATTGTGTCTTGTGGGTGCAGATCACTTGAAA
TCCCCCCGAACTTATGCTAGTCCAGAGGCTATTCAGAGGACAGAGATTTATGAATACTCA
AAGGTGCTGGGGAATTCTCAATTTATTCTCCCTCCTTTTCAACCATATAAACTTGTGTAC
GCACACATGCTAGCTGAAGTTGGGAGGATATCAGACGCATTAAAGTACTGTCAAGCATTG
TCGAAATCACTTAAAACTGGCCGAACCCCTGAGACGGAAACACTGAGACAGTTAGTGTCA
TCTCTTGAGGAAAGGATTAAAACTCACCAACAGGGAGGGTTCTCCACAAATTTGGCTCCT
GCAAAATTGGTTGGTAAATTGCTGAACCTTTTTGATAGCACGGCTCATCGTGTTGTTGGG
GGCTTGCCACCACCCATGCCAACAAGTGGTAGTTCACAAGGGAATGAACATCATCATCAG
TTTGTGTCGCCTAGAGTCTCAAGTAGTCAATCCACCATGGCAATGTCATCACTGATCCCC
TCAGAGCCAAGTAGTGAATGGGCAGCTGATAGCAGTAGAATGACGATGCACAATAGAAGT
GTTTCAGAGCCTGACATTGGGAGAACTCCAAGACAGGTTGACTCATCAAAGGACGCAAGC
TCAATTAACACAGGAAGCAATGCATCAGGAGCTGGAGGGATATCACGCTTACGTCGCTTT
GGCTTTGGCTCCCAGCTTCTCCAGAAAACTGTTGGATTAGTACTCAAACCCCGTCAAGGC
CGTCAGGCAAAATTGGGTGATTCGAATAAATTTTATTATGATGAAAAACTTAAAAGATGG
GTAGAGGAAGGCGCTGAACATCCTGCTGCAGAACCACCCCTTGCACCTCCACCAACCGTT
CCTGCTTTCCAGAATGGAGCGCCCGATTATAATGTGAAAAGTGTATTGAAAAGTGAAAGT
CCTATATGCAACAATGGATTTCCGGAAATGAAGAGTCCAACTTCTTCTGATAATGGTGCT
GGAATTCCACCTCTTCCACCTACCTCCAACCAATTCTCTGCTCGTGGTCGTATGGGTGTT
CGTTCAAGGTATGTCGACACGTTCAATAAAGGTGGTGGTAACCCAACTAATCTATTCCAG
TCACCTTCTGTTCCTTCCATAAAGCCTGCTACTGCTGGCAATGCCAAGTTTTTTGTTCCC
GCCCCGATGTCCCCTGTTGAAGAGACAGGGAACAGTACTTCCAATGAGCAAGAAACTTCA
AGTAATAGCGAGAGTGATTCAGTTTCTGCTGTTAATGGATCGACCCATTTTCCTGCACCA
ACATCGAGCGCTGTGCCTATCCAAAGATTTGCAAGCATGGACAACCTCTCCAATAAAGGA
GCTGTTGCTAGCTCTCTATCAGCTAACTCCCGGCGAACTGCATCATGGAGTGGCAGCTTT
CCCGATGCTTTTTCCCCAAATAAAGCTGAAATAAAACCACTGGGCTCTAGATTGAGTATG
CCTCCGTCGTCATTCATGCCTAGTGATGTTAATTCGATGCATTCCTCAACGAATGGCGGC
AGTCTCAGTGATGACCTTCATGAAGTAGACCTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400022127
PEP Infomation

pacid=37468865 transcript=PGSC0003DMT400032562 locus=PGSC0003DMG400012505 ID=PGSC0003DMT400032562.v4.03 annot-version=v4.03
Sequence

MASNPPFLVEDQTDEDFFDKLVNDDDDDVGFKVTTSSTVLGAGASSVYVDGNESDEVKAF
ADFSISDDVDSGVETGKKEGEKVDKGADSIAKPGLVVEGNRENSSGSLVSLTSGMSDGLL
EPSNGNLETEVIDGMTENQTSGSSNSGVKEVGWSAFHADPGTNDASGFGSYMDFFSELGD
NSGDATGNVGENVNKGSTVSPAEQVHDTKQNHETVHLENTSSLTQGQDCYAHDATTEQVA
DGQDLNSSQYWENLYPGWKYDTNTGQWYQVDSYESGANVQGSTDSNLVSDWSVSDGTPEV
SYLQKTAQSVSGNAAESGTTESVTNWNQVSQVNDATENLANWNQAMQASDHRGTVTDWNQ
ATLASDAGVVTTDWNQASQLNNGYPSHMVFDPQYPGWYYDTIALEWRTLESYTSSAQSTV
QGESQLDQSGLASVQTSSHNSDQRNYGAYGHNDNSRFQEFSSGGGDYNWSGSFGNYNQNQ
HSSNISQNENIAKSNTVSEYRGNQQLENNYNHDFSASSHVNRQISNHYEGTVPYNANTTQ
SQNDQRFFSGGGLGQQFSQPTLQQHEQKHASSDYYGTQTTANYSQQAFQSSQQFAHAPTA
GKSSAGRPPHALVSFGFGGKLIVMKDHSSFGNSSFGSQNPVGGSISVLSLMDVVSERFDN
SSLVVGACDYTRALCQQSFPGPLVGGSPSIKELNKWIDERIANSESPDSDYRKGEVLRLL
LSLLKIACQYYGKLRSPFGTDAALKESDVPETAIAKLFASVKRNGMQVNQYGSLAQCLQQ
LPSEGQMQATAAEVQSLLVSGRKKEALQCAQEGQLWGPALILAAQLGDQFYVETVKQMAL
RQLVAGSPLRTLCLLIAGQPADVFSLDSRAQSGMPVVNAVQQPAQFGANVMLDDWEENLA
VITANRTKDDELVLIHLGDCLWKERSDIVAAHICYLVAEANFEQYSDTARLCLVGADHLK
SPRTYASPEAIQRTEIYEYSKVLGNSQFILPPFQPYKLVYAHMLAEVGRISDALKYCQAL
SKSLKTGRTPETETLRQLVSSLEERIKTHQQGGFSTNLAPAKLVGKLLNLFDSTAHRVVG
GLPPPMPTSGSSQGNEHHHQFVSPRVSSSQSTMAMSSLIPSEPSSEWAADSSRMTMHNRS
VSEPDIGRTPRQVDSSKDASSINTGSNASGAGGISRLRRFGFGSQLLQKTVGLVLKPRQG
RQAKLGDSNKFYYDEKLKRWVEEGAEHPAAEPPLAPPPTVPAFQNGAPDYNVKSVLKSES
PICNNGFPEMKSPTSSDNGAGIPPLPPTSNQFSARGRMGVRSRYVDTFNKGGGNPTNLFQ
SPSVPSIKPATAGNAKFFVPAPMSPVEETGNSTSNEQETSSNSESDSVSAVNGSTHFPAP
TSSAVPIQRFASMDNLSNKGAVASSLSANSRRTASWSGSFPDAFSPNKAEIKPLGSRLSM
PPSSFMPSDVNSMHSSTNGGSLSDDLHEVDL*

Transcript Sequence

Transcript ID

PGSC0003DMT400032562
Transcript Infomation

pacid=37468865 locus=PGSC0003DMG400012505 ID=PGSC0003DMT400032562.v4.03 annot-version=v4.03
Sequence

ATGGCTTCGAATCCTCCATTTTTAGTGGAGGATCAGACGGATGAGGATTTTTTTGATAAA
TTGGTTAATGATGATGATGATGATGTTGGTTTTAAGGTAACTACATCGTCAACGGTTTTG
GGTGCGGGTGCGAGCTCGGTGTATGTTGATGGAAATGAATCTGATGAGGTTAAAGCCTTT
GCTGATTTCAGTATAAGTGATGATGTCGATAGTGGAGTTGAAACTGGGAAGAAGGAAGGG
GAGAAAGTAGATAAAGGTGCTGATAGCATTGCTAAACCGGGTTTGGTAGTTGAGGGGAAT
AGAGAGAACAGTAGTGGTTCTTTAGTGTCATTGACTTCTGGGATGTCAGATGGTTTACTC
GAACCCAGCAATGGTAATTTGGAGACTGAGGTAATTGATGGTATGACAGAGAATCAGACC
AGTGGATCGAGCAATTCGGGTGTGAAGGAAGTTGGATGGAGTGCTTTTCACGCTGATCCA
GGTACAAATGATGCTTCTGGGTTTGGATCCTACATGGACTTTTTCAGTGAATTGGGAGAT
AATAGCGGTGATGCAACGGGAAATGTCGGTGAGAATGTGAATAAGGGGTCAACTGTTTCG
CCAGCTGAACAGGTTCATGACACAAAACAAAATCATGAAACAGTGCATCTGGAGAATACT
AGCTCCTTAACACAGGGTCAAGATTGCTACGCCCATGATGCTACCACAGAACAAGTTGCA
GATGGACAGGATCTAAATAGTAGCCAGTATTGGGAAAATCTTTATCCAGGATGGAAGTAT
GACACAAATACCGGGCAATGGTATCAGGTTGATAGTTATGAATCAGGAGCTAATGTACAA
GGAAGTACTGATTCTAATTTGGTTTCTGATTGGTCAGTTTCTGATGGAACGCCAGAGGTC
TCGTACCTACAGAAAACTGCTCAGTCTGTATCTGGCAATGCAGCTGAGAGTGGTACGACT
GAGAGTGTCACTAATTGGAATCAGGTTTCGCAGGTAAATGATGCTACTGAGAATCTGGCA
AACTGGAATCAGGCTATGCAGGCGAGTGACCATAGGGGGACTGTGACTGACTGGAATCAG
GCGACACTGGCTAGTGATGCAGGTGTTGTCACAACTGACTGGAATCAGGCCTCACAACTT
AACAATGGGTATCCGTCGCATATGGTGTTTGATCCACAGTACCCTGGTTGGTATTATGAT
ACAATTGCACTTGAATGGCGCACTCTGGAGAGCTACACATCGTCTGCTCAATCAACTGTT
CAAGGTGAGAGCCAACTGGATCAGAGTGGTTTGGCTTCAGTGCAGACTTCCTCTCACAAT
AGTGATCAAAGGAATTATGGTGCATACGGGCACAATGACAATAGTAGATTCCAAGAGTTT
AGCAGCGGTGGAGGAGATTACAACTGGTCTGGCTCTTTTGGTAATTACAATCAGAATCAG
CATAGCTCAAATATATCGCAAAATGAAAATATTGCAAAAAGTAACACTGTGTCAGAATAT
AGGGGGAACCAACAATTAGAGAACAACTACAACCATGATTTTTCTGCAAGCAGCCATGTT
AATAGACAAATCTCTAATCATTATGAGGGAACAGTTCCATACAATGCAAACACAACTCAA
AGTCAAAATGACCAACGTTTTTTTTCTGGTGGGGGTTTGGGTCAGCAATTCAGTCAGCCA
ACACTCCAGCAACATGAACAGAAGCATGCCTCAAGTGATTACTATGGGACTCAGACCACA
GCCAATTATTCACAGCAAGCATTTCAGAGTAGCCAGCAGTTTGCTCATGCTCCCACTGCA
GGAAAATCATCTGCTGGCCGTCCACCACATGCTTTGGTCTCTTTTGGTTTTGGTGGAAAA
CTGATTGTGATGAAAGATCATAGTTCTTTTGGGAACTCATCCTTTGGAAGTCAGAATCCT
GTAGGAGGTTCAATATCTGTGCTCAGTTTGATGGATGTTGTCTCTGAGAGATTTGACAAT
TCAAGTCTTGTGGTGGGGGCATGTGACTATACCCGAGCTTTGTGCCAACAATCATTCCCT
GGTCCACTAGTTGGTGGAAGTCCCAGTATCAAGGAGTTGAATAAATGGATTGATGAGAGA
ATTGCAAACTCTGAATCTCCCGACTCGGATTACAGGAAAGGCGAAGTTTTGAGGTTACTT
CTGTCATTGCTAAAAATAGCATGTCAATATTATGGGAAACTCCGTTCTCCTTTTGGTACC
GATGCTGCGTTGAAGGAAAGTGATGTTCCAGAAACGGCGATAGCCAAATTGTTTGCATCT
GTGAAGAGGAATGGGATGCAAGTCAATCAATATGGCTCTCTCGCCCAGTGCTTGCAGCAA
TTGCCTTCTGAAGGACAGATGCAGGCGACAGCTGCTGAGGTTCAAAGTCTTCTAGTATCT
GGAAGAAAGAAAGAAGCATTACAATGTGCACAAGAGGGGCAGTTGTGGGGGCCAGCTCTT
ATTCTCGCTGCACAACTCGGTGATCAGTTCTATGTAGAAACGGTGAAGCAAATGGCACTT
CGACAGTTAGTAGCAGGGTCACCTTTGCGGACACTGTGCCTACTAATTGCTGGTCAACCG
GCTGATGTCTTTTCTCTAGATTCTAGAGCTCAAAGTGGCATGCCTGTTGTAAATGCGGTT
CAACAGCCTGCACAGTTTGGTGCCAATGTCATGCTGGATGACTGGGAAGAGAATTTGGCT
GTGATAACTGCAAACAGAACGAAGGATGATGAACTGGTGCTTATTCATCTTGGTGATTGT
TTGTGGAAAGAGAGGAGTGATATTGTTGCTGCACACATTTGCTATCTAGTGGCTGAAGCA
AACTTTGAACAATATTCAGATACCGCAAGATTGTGTCTTGTGGGTGCAGATCACTTGAAA
TCCCCCCGAACTTATGCTAGTCCAGAGGCTATTCAGAGGACAGAGATTTATGAATACTCA
AAGGTGCTGGGGAATTCTCAATTTATTCTCCCTCCTTTTCAACCATATAAACTTGTGTAC
GCACACATGCTAGCTGAAGTTGGGAGGATATCAGACGCATTAAAGTACTGTCAAGCATTG
TCGAAATCACTTAAAACTGGCCGAACCCCTGAGACGGAAACACTGAGACAGTTAGTGTCA
TCTCTTGAGGAAAGGATTAAAACTCACCAACAGGGAGGGTTCTCCACAAATTTGGCTCCT
GCAAAATTGGTTGGTAAATTGCTGAACCTTTTTGATAGCACGGCTCATCGTGTTGTTGGG
GGCTTGCCACCACCCATGCCAACAAGTGGTAGTTCACAAGGGAATGAACATCATCATCAG
TTTGTGTCGCCTAGAGTCTCAAGTAGTCAATCCACCATGGCAATGTCATCACTGATCCCC
TCAGAGCCAAGTAGTGAATGGGCAGCTGATAGCAGTAGAATGACGATGCACAATAGAAGT
GTTTCAGAGCCTGACATTGGGAGAACTCCAAGACAGGTTGACTCATCAAAGGACGCAAGC
TCAATTAACACAGGAAGCAATGCATCAGGAGCTGGAGGGATATCACGCTTACGTCGCTTT
GGCTTTGGCTCCCAGCTTCTCCAGAAAACTGTTGGATTAGTACTCAAACCCCGTCAAGGC
CGTCAGGCAAAATTGGGTGATTCGAATAAATTTTATTATGATGAAAAACTTAAAAGATGG
GTAGAGGAAGGCGCTGAACATCCTGCTGCAGAACCACCCCTTGCACCTCCACCAACCGTT
CCTGCTTTCCAGAATGGAGCGCCCGATTATAATGTGAAAAGTGTATTGAAAAGTGAAAGT
CCTATATGCAACAATGGATTTCCGGAAATGAAGAGTCCAACTTCTTCTGATAATGGTGCT
GGAATTCCACCTCTTCCACCTACCTCCAACCAATTCTCTGCTCGTGGTCGTATGGGTGTT
CGTTCAAGGTATGTCGACACGTTCAATAAAGGTGGTGGTAACCCAACTAATCTATTCCAG
TCACCTTCTGTTCCTTCCATAAAGCCTGCTACTGCTGGCAATGCCAAGTTTTTTGTTCCC
GCCCCGATGTCCCCTGTTGAAGAGACAGGGAACAGTACTTCCAATGAGCAAGAAACTTCA
AGTAATAGCGAGAGTGATTCAGTTTCTGCTGTTAATGGATCGACCCATTTTCCTGCACCA
ACATCGAGCGCTGTGCCTATCCAAAGATTTGCAAGCATGGACAACCTCTCCAATAAAGGA
GCTGTTGCTAGCTCTCTATCAGCTAACTCCCGGCGAACTGCATCATGGAGTGGCAGCTTT
CCCGATGCTTTTTCCCCAAATAAAGCTGAAATAAAACCACTGGGCTCTAGATTGAGTATG
CCTCCGTCGTCATTCATGCCTAGTGATGTTAATTCGATGCATTCCTCAACGAATGGCGGC
AGTCTCAGTGATGACCTTCATGAAGTAGACCTGTGA