Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032501
CDS Infomation

pacid=37470173 polypeptide=PGSC0003DMP400022085 locus=PGSC0003DMG401012482 ID=PGSC0003DMT400032501.v4.03 annot-version=v4.03
Sequence

ATGGTTAGAGGAAGAGATGCCTGTTGGGAACATTGTGTCCTTGTTGATGCTACTAGACAG
AAAGTAAGATGCAACTACTGTCGGCGGGAGTTCAGCGGAGGGGTTTACCGAATGAAGTTC
CATTTGGCTCAAATAAAAAACAAAGACATAGTACCATGTGGTCAAGTCCCGAATGAGGTA
AGGGACCACATTAAAAGTATTTTGAACAATCCAAAGAAACAGAAAAATCCTAAGAAAGCA
AAACTGGATCAGGCTGCCAATGGTCAGGAAAGTAGTAGCTCTTCAGCTAGCGGTGGAATC
CGTCCTCCTCATGATGGATTTAGTGGACAGAATGGTAGTCCGTGTCCTCCGTCCATTATG
TTTGCACGCTGTTCTCCTAGTTCACAGCCAGCAGTTGACGATGTTCAAAAGCAGAAACAG
GACAATACTGATAAGAAGATTGCTGAGTTTTTCTACCACAATGCAATTCCTTTTTCAGTC
GCAAAGTCCTTTTACTATCAGGAAATGGTAGATGCTATTCTTGAGTGTGAAGCGGGGTAT
AAAGCTCCATGTACTGAAGAATTGGGCACTAAACTTTTGGAGAAAGTCAAAGTCGATATC
GACAATGGTTACAAGAGATTAAGGGATGAATGGAAGGAAACAGGCTGCACAATCTTATGT
GATTGCTGGTCTGACAGAAGTGCCAAATGCCTTGTGGTATTTTCTGTGACATGTTCTAAA
GGGACAATGTTCCTTAGGTCCGTAGACATATCTGATCACGCAGATGATCCTCATTATCTA
TTCGGGTTGCTTGAATCAGTTGTTCTGGAAATTGGTGTTAAAAATGTCATCCAAGTAATG
ACAGATAGTTCTGCTAGTTACATATATGCTGGAAGGCTTGTCATGAAGAAGTACCCTTCG
GTGTTCTGGTCTCCGTGTGCTTCACATTGTATCAATAAAATGTTAGAGGATTTCAGCGAG
CATGACTGGGTGAACGTTGTCCTTAAAGAGGCAAATATGATCACAAAATACATATACAGT
AATGACTGGATTCTAGATTTGATGAGAAAATTTTCAGGTGGAAGGGAGTTTGTCCTCGTT
CGACCAAGAATTACAAACTTCGTAGCAATGTTTCTCTCTTTACGGGCCCTTGTAGTGCAA
GAGGATAATTTGAAACACATGTTCTCTCATGCAGAGTGGTTGTCATCCATATATAGTAGG
CACCCCGAAGTCCAAGCCATAAAGTCATTGTTGTGCCTTGAAAGATTCTGGAAATCCGCA
CGTGAAGCTGTTATGGTTTCTGAACCTCTACTTAAACTGTTGAGAATTGTCGACGGAGAC
ATGCCTGCTATGGCCTATATGTACGAGGGAGTGGAAAGAGCAAAGCTCTCCATTAAAGCA
TTTTATAAGGACGTTGATGAAAAATTTGTGCCGATTTGGGATATAATTGACAGTAGATGG
AGCACGCTTCTTCAATCCCCATTACACGCAGCAGCAGCATTCCTTAATCCCTCCATTTTC
TACAACTCGAGCTTTAAGATTGATGCAAGGATCAGGAATGGCTTTCAAGAAGCCATGACG
AAAATGGCTTATGAGGATAAAGATAAAGTAGAAATTACTAAAGAGCATCCGATGTACATG
AATGCGCAAGGTGCTTTAGGGACTGAATTTGCAATAAAGGGAAGGACACTGAATGCCCCA
GGTACAATTAATTCTTCAACGCCAGAAGTGCACTTGCATATTGTTAGCATGTTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400022085
PEP Infomation

pacid=37470173 transcript=PGSC0003DMT400032501 locus=PGSC0003DMG401012482 ID=PGSC0003DMT400032501.v4.03 annot-version=v4.03
Sequence

MVRGRDACWEHCVLVDATRQKVRCNYCRREFSGGVYRMKFHLAQIKNKDIVPCGQVPNEV
RDHIKSILNNPKKQKNPKKAKLDQAANGQESSSSSASGGIRPPHDGFSGQNGSPCPPSIM
FARCSPSSQPAVDDVQKQKQDNTDKKIAEFFYHNAIPFSVAKSFYYQEMVDAILECEAGY
KAPCTEELGTKLLEKVKVDIDNGYKRLRDEWKETGCTILCDCWSDRSAKCLVVFSVTCSK
GTMFLRSVDISDHADDPHYLFGLLESVVLEIGVKNVIQVMTDSSASYIYAGRLVMKKYPS
VFWSPCASHCINKMLEDFSEHDWVNVVLKEANMITKYIYSNDWILDLMRKFSGGREFVLV
RPRITNFVAMFLSLRALVVQEDNLKHMFSHAEWLSSIYSRHPEVQAIKSLLCLERFWKSA
REAVMVSEPLLKLLRIVDGDMPAMAYMYEGVERAKLSIKAFYKDVDEKFVPIWDIIDSRW
STLLQSPLHAAAAFLNPSIFYNSSFKIDARIRNGFQEAMTKMAYEDKDKVEITKEHPMYM
NAQGALGTEFAIKGRTLNAPGTINSSTPEVHLHIVSML*

Transcript Sequence

Transcript ID

PGSC0003DMT400032501
Transcript Infomation

pacid=37470173 locus=PGSC0003DMG401012482 ID=PGSC0003DMT400032501.v4.03 annot-version=v4.03
Sequence

ATGGTTAGAGGAAGAGATGCCTGTTGGGAACATTGTGTCCTTGTTGATGCTACTAGACAG
AAAGTAAGATGCAACTACTGTCGGCGGGAGTTCAGCGGAGGGGTTTACCGAATGAAGTTC
CATTTGGCTCAAATAAAAAACAAAGACATAGTACCATGTGGTCAAGTCCCGAATGAGGTA
AGGGACCACATTAAAAGTATTTTGAACAATCCAAAGAAACAGAAAAATCCTAAGAAAGCA
AAACTGGATCAGGCTGCCAATGGTCAGGAAAGTAGTAGCTCTTCAGCTAGCGGTGGAATC
CGTCCTCCTCATGATGGATTTAGTGGACAGAATGGTAGTCCGTGTCCTCCGTCCATTATG
TTTGCACGCTGTTCTCCTAGTTCACAGCCAGCAGTTGACGATGTTCAAAAGCAGAAACAG
GACAATACTGATAAGAAGATTGCTGAGTTTTTCTACCACAATGCAATTCCTTTTTCAGTC
GCAAAGTCCTTTTACTATCAGGAAATGGTAGATGCTATTCTTGAGTGTGAAGCGGGGTAT
AAAGCTCCATGTACTGAAGAATTGGGCACTAAACTTTTGGAGAAAGTCAAAGTCGATATC
GACAATGGTTACAAGAGATTAAGGGATGAATGGAAGGAAACAGGCTGCACAATCTTATGT
GATTGCTGGTCTGACAGAAGTGCCAAATGCCTTGTGGTATTTTCTGTGACATGTTCTAAA
GGGACAATGTTCCTTAGGTCCGTAGACATATCTGATCACGCAGATGATCCTCATTATCTA
TTCGGGTTGCTTGAATCAGTTGTTCTGGAAATTGGTGTTAAAAATGTCATCCAAGTAATG
ACAGATAGTTCTGCTAGTTACATATATGCTGGAAGGCTTGTCATGAAGAAGTACCCTTCG
GTGTTCTGGTCTCCGTGTGCTTCACATTGTATCAATAAAATGTTAGAGGATTTCAGCGAG
CATGACTGGGTGAACGTTGTCCTTAAAGAGGCAAATATGATCACAAAATACATATACAGT
AATGACTGGATTCTAGATTTGATGAGAAAATTTTCAGGTGGAAGGGAGTTTGTCCTCGTT
CGACCAAGAATTACAAACTTCGTAGCAATGTTTCTCTCTTTACGGGCCCTTGTAGTGCAA
GAGGATAATTTGAAACACATGTTCTCTCATGCAGAGTGGTTGTCATCCATATATAGTAGG
CACCCCGAAGTCCAAGCCATAAAGTCATTGTTGTGCCTTGAAAGATTCTGGAAATCCGCA
CGTGAAGCTGTTATGGTTTCTGAACCTCTACTTAAACTGTTGAGAATTGTCGACGGAGAC
ATGCCTGCTATGGCCTATATGTACGAGGGAGTGGAAAGAGCAAAGCTCTCCATTAAAGCA
TTTTATAAGGACGTTGATGAAAAATTTGTGCCGATTTGGGATATAATTGACAGTAGATGG
AGCACGCTTCTTCAATCCCCATTACACGCAGCAGCAGCATTCCTTAATCCCTCCATTTTC
TACAACTCGAGCTTTAAGATTGATGCAAGGATCAGGAATGGCTTTCAAGAAGCCATGACG
AAAATGGCTTATGAGGATAAAGATAAAGTAGAAATTACTAAAGAGCATCCGATGTACATG
AATGCGCAAGGTGCTTTAGGGACTGAATTTGCAATAAAGGGAAGGACACTGAATGCCCCA
GGTACAATTAATTCTTCAACGCCAGAAGTGCACTTGCATATTGTTAGCATGTTATAA