Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032491
CDS Infomation

pacid=37470734 polypeptide=PGSC0003DMP400022077 locus=PGSC0003DMG400012478 ID=PGSC0003DMT400032491.v4.03 annot-version=v4.03
Sequence

ATGTCATCATCATCTCCATTAAGCCTTGATGGTCTAGACCTAAACCAAGTTTTCTTCAAA
TCAATCTCCAACGCTGATCCGCCATCACAGACGAACCACCACACGAAGATCTCCGTGATC
GGCGTCGGCAATGTCGGGATGGCCATCGCCCAAACAATCCTTACTCAGGATCTTGTCGAC
GAGCTAGCACTCGTCGACGTAAATTCTGATAAATTACGCGGCGAGATGTTGGATCTCCAA
CATGCCGCCGCGTTCCTTCCGAGAACTAAAATCGTTGCTTCGGTTGACTATACAGTTACG
GCCGGGTCGGATCTGTGTATTGTCACGGCGGGTGCTAGGCAGAACCCGGGGGAGAGCAGG
TTGAATTTGTTGCAGAGGAATTTGGCGATGTATAAAAGTATTGTGCCGGAGCTGGTGAAG
TATTCGCCGGAGTGTATATTGTTGATTGTGTCGAATCCGGTGGATGTTTTGACCTATGTT
GCTTGGAAGTTGTCTGGGTTCCCAGTGAATCGGGTTATCGGGTCGGGTACGAACTTGGAT
TCGTCCAGGTTTCGGTTTTTGATTGCCGATCACCTTGATGTTAATGCCCAGGATGTGCAG
GCATACATTGTAGGTGAGCATGGTGACAGCTCTGTGGCACTGTGGTCTAGTATTAGCGTT
GGAGGGATTCCGGTTCTTAGCTTTCTGGAGAGGCAACAAATTGCGTTTGAGAAGGATACA
TTGGAAAAAATCCACAAACAAGTTGTGCAGAGTGCATATGAAGTGATCAATCTCAAAGGC
TACACATCGTGGGCAATCGGATACTCTGTGGCTAACTTGGCTTTTTCAATTATTCGAGAT
CAGAGAAGGATTCACCCCGTCTCAATCCTTGTGAAGGGGTTCTATGGTATTGATGGCGGC
GATGTTTTCTTGAGCTTGCCTGCACAGCTTGGTAGAAGTGGAGTTTTAGGTGTGACTAAT
GTGCATCTTACTGATGAGGAAATTCAGCAACTTAGGAACTCTGCTGAGACTATCTTAGAA
GTGCAAAACCAGTTGGGAATTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400022077
PEP Infomation

pacid=37470734 transcript=PGSC0003DMT400032491 locus=PGSC0003DMG400012478 ID=PGSC0003DMT400032491.v4.03 annot-version=v4.03
Sequence

MSSSSPLSLDGLDLNQVFFKSISNADPPSQTNHHTKISVIGVGNVGMAIAQTILTQDLVD
ELALVDVNSDKLRGEMLDLQHAAAFLPRTKIVASVDYTVTAGSDLCIVTAGARQNPGESR
LNLLQRNLAMYKSIVPELVKYSPECILLIVSNPVDVLTYVAWKLSGFPVNRVIGSGTNLD
SSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGIPVLSFLERQQIAFEKDT
LEKIHKQVVQSAYEVINLKGYTSWAIGYSVANLAFSIIRDQRRIHPVSILVKGFYGIDGG
DVFLSLPAQLGRSGVLGVTNVHLTDEEIQQLRNSAETILEVQNQLGI*

Transcript Sequence

Transcript ID

PGSC0003DMT400032491
Transcript Infomation

pacid=37470734 locus=PGSC0003DMG400012478 ID=PGSC0003DMT400032491.v4.03 annot-version=v4.03
Sequence

ATGTCATCATCATCTCCATTAAGCCTTGATGGTCTAGACCTAAACCAAGTTTTCTTCAAA
TCAATCTCCAACGCTGATCCGCCATCACAGACGAACCACCACACGAAGATCTCCGTGATC
GGCGTCGGCAATGTCGGGATGGCCATCGCCCAAACAATCCTTACTCAGGATCTTGTCGAC
GAGCTAGCACTCGTCGACGTAAATTCTGATAAATTACGCGGCGAGATGTTGGATCTCCAA
CATGCCGCCGCGTTCCTTCCGAGAACTAAAATCGTTGCTTCGGTTGACTATACAGTTACG
GCCGGGTCGGATCTGTGTATTGTCACGGCGGGTGCTAGGCAGAACCCGGGGGAGAGCAGG
TTGAATTTGTTGCAGAGGAATTTGGCGATGTATAAAAGTATTGTGCCGGAGCTGGTGAAG
TATTCGCCGGAGTGTATATTGTTGATTGTGTCGAATCCGGTGGATGTTTTGACCTATGTT
GCTTGGAAGTTGTCTGGGTTCCCAGTGAATCGGGTTATCGGGTCGGGTACGAACTTGGAT
TCGTCCAGGTTTCGGTTTTTGATTGCCGATCACCTTGATGTTAATGCCCAGGATGTGCAG
GCATACATTGTAGGTGAGCATGGTGACAGCTCTGTGGCACTGTGGTCTAGTATTAGCGTT
GGAGGGATTCCGGTTCTTAGCTTTCTGGAGAGGCAACAAATTGCGTTTGAGAAGGATACA
TTGGAAAAAATCCACAAACAAGTTGTGCAGAGTGCATATGAAGTGATCAATCTCAAAGGC
TACACATCGTGGGCAATCGGATACTCTGTGGCTAACTTGGCTTTTTCAATTATTCGAGAT
CAGAGAAGGATTCACCCCGTCTCAATCCTTGTGAAGGGGTTCTATGGTATTGATGGCGGC
GATGTTTTCTTGAGCTTGCCTGCACAGCTTGGTAGAAGTGGAGTTTTAGGTGTGACTAAT
GTGCATCTTACTGATGAGGAAATTCAGCAACTTAGGAACTCTGCTGAGACTATCTTAGAA
GTGCAAAACCAGTTGGGAATTTAA