Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032456
CDS Infomation

pacid=37469624 polypeptide=PGSC0003DMP400022055 locus=PGSC0003DMG400012472 ID=PGSC0003DMT400032456.v4.03 annot-version=v4.03
Sequence

ATGGATATACTTTTTAATGCTGTAGGTGGCTTTGTTGTTGAGGTGGGAAAGTTTGTATGT
AAATGCATCTATCCTAAGATTGAAAATATTGTCCGTTTCTCGTCAAAAATTGAAAATCTA
AAGGAGGAAATGGAGAAGCTAACAAAGTTTAGAAATGATATCAAAGGAAAGGTGGAAGAA
GCTGAGGGAGAAGGCTATAAACCAAAACTAGATGTTATCAAGTGGTTGGAAGATGTTTGC
GAGCTGCAGAAAGAATGGGAATCTATGCAAGATAGCATTGCAACGGCTAAGACGCTTGCA
TATAAATGTTGTCCAAAATGCAGCCTTCGCTCGGAAGTCTCCACTCAAGCACAGAAGATT
CAAGATCAACTTCACAGGCTTATAGAGGTCGGAGAAAACTTTGGATCCAATTTGGTGGTA
GAAAATTATCAGATTATAAAAGTTGAGTTCATCCCGGGAACATCAATAGAAGGCCAGTCA
GCAGCAACAAAAAATCTCAACAAAATCCTACGACTACTAGAAGATGATAAGGTATGCATC
ATCGGTGTGTGGGGTACGGGAGGAGTTGGGAAAACATCATTGGTGAATAATCTGAACAAC
AAGCTCCGGAAGACGGATGTGTCAAGTTTTAAACTGTCTTTTGGTGTTGTGATATGGGTT
ACAGTGCCCAAACCACCAATAGACATAAGAAACGTGCAAACACAAATTGCAAGTAGATTA
AACCTAAAGGTAGATAAGGAGGGAAATGTAAAGAGCAATGCCAGCAAAATTTATAAAAGA
CTCAAGCAAGAAAAAAGTTTCCTTCTCATACTAGATGATGTTTGGGAAGCTATAAATTTG
GATGATGTAGGTGTGCCCCAACCTGAACCTCCCGCTAGAAGCAAGGTCATTATAACTTCT
CGTTCTTTGGCTGTTTGTAAGCAAATGAAAATAGACACCGAAATGAAGGTTTACACATTG
GATGAGGATGAATCTTGGCAACTGTTTGTCAAAAATGCGGGAGATGTTGCCAACCTGGTG
GATATTCAACCATTAGCAAAGGAAATTACACGAGAGTGTGATGGTTTACCATTAGCAATC
ACTGTTATTGGAACATCTATGAGAGGGAAGACAAAGGTCGAGCTCTGGGAAGATGCTTTG
AAATCACTTAGAATGTCTGAACCTCATAACAAAGATGTTACAGATAAGGTTTACGAGGTC
ATCAAGTGGAGTTTTGATTCTTTAGAATCTCAGGATAATGAATTATACTCTAAGCAAAGA
AGCAAACATGTGAAGAATAAGAGAGGTGACATTCGAAGTTGTTTCTTGTATTGCTCCTTA
TATCCAGCAGCTATTTCAACAGAAGATCTCATAAAGTGTTGGTGGGCAGAGGGGTTCCTT
GGTGTACATGACACATATGAAGAAGCTTACAACAGGGGAATCACAATTATTGATAGTCTA
AAAGATGCTTGCTTGGTAGAAGAAGCCCATAAGACGGATTGTGTGAAGATGCATGATGTG
GTTCGTGATGTTGCTATATGGATAGATAATTCCTTCGGGTTAACTGACATTTCACATATC
GAAATGTCAGCTTCTGTGAAGAGAATATCTCTCCTAAGCAAAGAAATTCAAAGTCTACCT
GATAACTTCAGAGAATGCCCAGAGACAACAAGTTTACTATTGCAAGACAATGATCTCCTT
AGCGAAATTCCCCATGAATTCTTTTTGGCATTTCCAGCCCTAAGAGTTCTGAACCTGAGT
GAAACTGGTATTAGAGATATGCCTTGTTCCATCGATACTTTGTGTCAACTACGTGCTCTA
ATACTACGAAATTGCTATGACTTGAAAGAGTTACCACCTATTGGTAACCTTTTCAATTTG
GAATTGTTTGATTGTGATAATACAAGGTTATGTTGTCTGCCTCAAGGAATGGATAAGTTG
ACGAATCTGAGGCTATTAAATCTGCCTGTAGATTATTTGGAGGAGAGCATCATCCATGGA
TTTTTCCTCAAATTACCTAGAATTGAAATCTTAAATATGCTGCCGACTAAAACGAGAGAT
GTAGATTGGATGATGAGAAAGAATAGAGTGACTCTTCTTGTACCAACATCTTTTGATGAG
ATATCCTCTCTACACAATCTGACCAGTCTTTTCATTAATTTGGATAACTCATCAATTCTC
ATTAGAGACCACACCTGGATGAAAAGATTTCACATTGAAATTGGGGAAACTTCAAAGTCA
ATACCATTCAACAAGTCAATAAAGATGATAAGCATCTCCCATTGTGAAACTTTCAGTAAC
GGAGAGCTCTCAGGCATGTTACATTTTGCTTCACATTTGCACTTGTTAAAATGTGGGGGT
CTCAGGAAGTTGATCGCGAACAACAGTTTTGATAGATTAAAATCACTACACATAGAGAGT
TGTTCTTGTGATTTCACACCAGCAGAAGAAGGAAATGAACAGTTTGATGATCCTTTGCCA
AATCTGGAACATCTCAGTCTCTTTTCTGTACATAATTTAAAGAGTGTCTCTGATTTCGGT
CAACTTCTGGGGCTAAGATTTTATGGATTACGTCAAATGGAAATATCCTCTTGTCGTAAT
CTAACATGTCTTTTTATTGTTGGTGGATATTTTTCTGTACCTAAGCACTTGGAAGAAGTA
TCAGTTGCCTTTTGTCATCGGCTGACAGAGTTACTGGTGCAATGGACACATTTTAGCTCA
GAAATTCCGAGAGTCCGAAAGTTACGGTTGAAAGAATTACCAAAATTAAGAACACTGAGG
GAGCCGTGGGATCACATAGAGGAACTTAAGCTTATCAATTGCTATGAAATAACGAAATTG
CCTTTCTCTATTCAAACCTCCAATAAGATCAGGCTAATAAAAGGAACAACAGAATGGTGG
AACCTACTGGAATGGGATGACATCAACTTCAAGTCAAATTTAGAGCATTGTTTCCTAAAG
AAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400022055
PEP Infomation

pacid=37469624 transcript=PGSC0003DMT400032456 locus=PGSC0003DMG400012472 ID=PGSC0003DMT400032456.v4.03 annot-version=v4.03
Sequence

MDILFNAVGGFVVEVGKFVCKCIYPKIENIVRFSSKIENLKEEMEKLTKFRNDIKGKVEE
AEGEGYKPKLDVIKWLEDVCELQKEWESMQDSIATAKTLAYKCCPKCSLRSEVSTQAQKI
QDQLHRLIEVGENFGSNLVVENYQIIKVEFIPGTSIEGQSAATKNLNKILRLLEDDKVCI
IGVWGTGGVGKTSLVNNLNNKLRKTDVSSFKLSFGVVIWVTVPKPPIDIRNVQTQIASRL
NLKVDKEGNVKSNASKIYKRLKQEKSFLLILDDVWEAINLDDVGVPQPEPPARSKVIITS
RSLAVCKQMKIDTEMKVYTLDEDESWQLFVKNAGDVANLVDIQPLAKEITRECDGLPLAI
TVIGTSMRGKTKVELWEDALKSLRMSEPHNKDVTDKVYEVIKWSFDSLESQDNELYSKQR
SKHVKNKRGDIRSCFLYCSLYPAAISTEDLIKCWWAEGFLGVHDTYEEAYNRGITIIDSL
KDACLVEEAHKTDCVKMHDVVRDVAIWIDNSFGLTDISHIEMSASVKRISLLSKEIQSLP
DNFRECPETTSLLLQDNDLLSEIPHEFFLAFPALRVLNLSETGIRDMPCSIDTLCQLRAL
ILRNCYDLKELPPIGNLFNLELFDCDNTRLCCLPQGMDKLTNLRLLNLPVDYLEESIIHG
FFLKLPRIEILNMLPTKTRDVDWMMRKNRVTLLVPTSFDEISSLHNLTSLFINLDNSSIL
IRDHTWMKRFHIEIGETSKSIPFNKSIKMISISHCETFSNGELSGMLHFASHLHLLKCGG
LRKLIANNSFDRLKSLHIESCSCDFTPAEEGNEQFDDPLPNLEHLSLFSVHNLKSVSDFG
QLLGLRFYGLRQMEISSCRNLTCLFIVGGYFSVPKHLEEVSVAFCHRLTELLVQWTHFSS
EIPRVRKLRLKELPKLRTLREPWDHIEELKLINCYEITKLPFSIQTSNKIRLIKGTTEWW
NLLEWDDINFKSNLEHCFLKK*

Transcript Sequence

Transcript ID

PGSC0003DMT400032456
Transcript Infomation

pacid=37469624 locus=PGSC0003DMG400012472 ID=PGSC0003DMT400032456.v4.03 annot-version=v4.03
Sequence

ATGGATATACTTTTTAATGCTGTAGGTGGCTTTGTTGTTGAGGTGGGAAAGTTTGTATGT
AAATGCATCTATCCTAAGATTGAAAATATTGTCCGTTTCTCGTCAAAAATTGAAAATCTA
AAGGAGGAAATGGAGAAGCTAACAAAGTTTAGAAATGATATCAAAGGAAAGGTGGAAGAA
GCTGAGGGAGAAGGCTATAAACCAAAACTAGATGTTATCAAGTGGTTGGAAGATGTTTGC
GAGCTGCAGAAAGAATGGGAATCTATGCAAGATAGCATTGCAACGGCTAAGACGCTTGCA
TATAAATGTTGTCCAAAATGCAGCCTTCGCTCGGAAGTCTCCACTCAAGCACAGAAGATT
CAAGATCAACTTCACAGGCTTATAGAGGTCGGAGAAAACTTTGGATCCAATTTGGTGGTA
GAAAATTATCAGATTATAAAAGTTGAGTTCATCCCGGGAACATCAATAGAAGGCCAGTCA
GCAGCAACAAAAAATCTCAACAAAATCCTACGACTACTAGAAGATGATAAGGTATGCATC
ATCGGTGTGTGGGGTACGGGAGGAGTTGGGAAAACATCATTGGTGAATAATCTGAACAAC
AAGCTCCGGAAGACGGATGTGTCAAGTTTTAAACTGTCTTTTGGTGTTGTGATATGGGTT
ACAGTGCCCAAACCACCAATAGACATAAGAAACGTGCAAACACAAATTGCAAGTAGATTA
AACCTAAAGGTAGATAAGGAGGGAAATGTAAAGAGCAATGCCAGCAAAATTTATAAAAGA
CTCAAGCAAGAAAAAAGTTTCCTTCTCATACTAGATGATGTTTGGGAAGCTATAAATTTG
GATGATGTAGGTGTGCCCCAACCTGAACCTCCCGCTAGAAGCAAGGTCATTATAACTTCT
CGTTCTTTGGCTGTTTGTAAGCAAATGAAAATAGACACCGAAATGAAGGTTTACACATTG
GATGAGGATGAATCTTGGCAACTGTTTGTCAAAAATGCGGGAGATGTTGCCAACCTGGTG
GATATTCAACCATTAGCAAAGGAAATTACACGAGAGTGTGATGGTTTACCATTAGCAATC
ACTGTTATTGGAACATCTATGAGAGGGAAGACAAAGGTCGAGCTCTGGGAAGATGCTTTG
AAATCACTTAGAATGTCTGAACCTCATAACAAAGATGTTACAGATAAGGTTTACGAGGTC
ATCAAGTGGAGTTTTGATTCTTTAGAATCTCAGGATAATGAATTATACTCTAAGCAAAGA
AGCAAACATGTGAAGAATAAGAGAGGTGACATTCGAAGTTGTTTCTTGTATTGCTCCTTA
TATCCAGCAGCTATTTCAACAGAAGATCTCATAAAGTGTTGGTGGGCAGAGGGGTTCCTT
GGTGTACATGACACATATGAAGAAGCTTACAACAGGGGAATCACAATTATTGATAGTCTA
AAAGATGCTTGCTTGGTAGAAGAAGCCCATAAGACGGATTGTGTGAAGATGCATGATGTG
GTTCGTGATGTTGCTATATGGATAGATAATTCCTTCGGGTTAACTGACATTTCACATATC
GAAATGTCAGCTTCTGTGAAGAGAATATCTCTCCTAAGCAAAGAAATTCAAAGTCTACCT
GATAACTTCAGAGAATGCCCAGAGACAACAAGTTTACTATTGCAAGACAATGATCTCCTT
AGCGAAATTCCCCATGAATTCTTTTTGGCATTTCCAGCCCTAAGAGTTCTGAACCTGAGT
GAAACTGGTATTAGAGATATGCCTTGTTCCATCGATACTTTGTGTCAACTACGTGCTCTA
ATACTACGAAATTGCTATGACTTGAAAGAGTTACCACCTATTGGTAACCTTTTCAATTTG
GAATTGTTTGATTGTGATAATACAAGGTTATGTTGTCTGCCTCAAGGAATGGATAAGTTG
ACGAATCTGAGGCTATTAAATCTGCCTGTAGATTATTTGGAGGAGAGCATCATCCATGGA
TTTTTCCTCAAATTACCTAGAATTGAAATCTTAAATATGCTGCCGACTAAAACGAGAGAT
GTAGATTGGATGATGAGAAAGAATAGAGTGACTCTTCTTGTACCAACATCTTTTGATGAG
ATATCCTCTCTACACAATCTGACCAGTCTTTTCATTAATTTGGATAACTCATCAATTCTC
ATTAGAGACCACACCTGGATGAAAAGATTTCACATTGAAATTGGGGAAACTTCAAAGTCA
ATACCATTCAACAAGTCAATAAAGATGATAAGCATCTCCCATTGTGAAACTTTCAGTAAC
GGAGAGCTCTCAGGCATGTTACATTTTGCTTCACATTTGCACTTGTTAAAATGTGGGGGT
CTCAGGAAGTTGATCGCGAACAACAGTTTTGATAGATTAAAATCACTACACATAGAGAGT
TGTTCTTGTGATTTCACACCAGCAGAAGAAGGAAATGAACAGTTTGATGATCCTTTGCCA
AATCTGGAACATCTCAGTCTCTTTTCTGTACATAATTTAAAGAGTGTCTCTGATTTCGGT
CAACTTCTGGGGCTAAGATTTTATGGATTACGTCAAATGGAAATATCCTCTTGTCGTAAT
CTAACATGTCTTTTTATTGTTGGTGGATATTTTTCTGTACCTAAGCACTTGGAAGAAGTA
TCAGTTGCCTTTTGTCATCGGCTGACAGAGTTACTGGTGCAATGGACACATTTTAGCTCA
GAAATTCCGAGAGTCCGAAAGTTACGGTTGAAAGAATTACCAAAATTAAGAACACTGAGG
GAGCCGTGGGATCACATAGAGGAACTTAAGCTTATCAATTGCTATGAAATAACGAAATTG
CCTTTCTCTATTCAAACCTCCAATAAGATCAGGCTAATAAAAGGAACAACAGAATGGTGG
AACCTACTGGAATGGGATGACATCAACTTCAAGTCAAATTTAGAGCATTGTTTCCTAAAG
AAGTAA