Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032434
CDS Infomation

pacid=37434547 polypeptide=PGSC0003DMP400022041 locus=PGSC0003DMG400012458 ID=PGSC0003DMT400032434.v4.03 annot-version=v4.03
Sequence

ATGGATTCGAGGACTCGTTTGGATTATGCTCTGTTTCAGCTTACTCCAACACGAACAAGA
TGCGATCTTGTAATCTTTGCTGGTGAAAATTCGGAGAAATTAGCTTCTGGTTTGCTTGAA
CCATTTCTCATTCATCTCAAATCCGCTAAAGATCAGATTTCTAAAGGAGGATATTCAATT
ACTCTCCGACCTTCGATTACTAATGTTTCTTGGTTCACTAAAGCAACTTTACAGAGGTTT
GTGAAATTTGTTAGTACTCCTGAAATTCTCGAACGATTTGTAAGCATAGAAAGAGATATT
ATGCAGATTGAGAGTGAACAAGCTAATGGTAGTATCAATGTTGAAGGAAATGCATCAGCT
TTTGATGGAGATTCCAAATTCTCTCCTGGTTTTTCAAAGTCCAATGGTGAATCTAATGGT
GTTGGTGATGCTGCAAAAGAAGAAAATCCCAAAGTGCGTCTTCAACGCGTTCTAGAAAGC
AGAAAAGCAGTTTTAAGGAAAGAGCAAGCAATGGCATATGCTCGTGCTTTGGTATCTGGC
TTTGATATGGATAATTTGGATGATCTCATATCTTTTTCCAATGCTTTTGGTGCTCTACGT
TTAAGAGAAGCATGCATTAAGTTTATGGAGCTATGCAACAAAAAGAGAGATGATGGAATG
TGGATGGATGAAGTTGCTGCTCTTCAAGCCTACTCTCCTTCTGAGTTTTCGTATTTTGGG
AGGTCTGGAATCACGCTTTCTGCTGATGTTACTCAAGACAATCAAAGTATTGGCCTTTCC
ATCAGAAAACAGAATGATGATACCTTAAGTCATGGAAGTTTGGATACTAGTCAAGAAAAT
GGTTTACCACCACCTATCAAAGTTCACTCAACAGAAGGGAAATCACAACCAATGTGGCCA
AACAATATGCCACCTTACATGCAAAACTATCAAAATCCTGCATTTCAACAAATTCCACCA
TATCCAGGGTACATGTTTTCGGGCAATCCTACTTACTATCCTGGAATGCCATGGCCTGCA
AATCCGGAAGATTCTAGTCGAGGTCCCGGTCCTGAATCAGATTATAATTGGAAGAATAAA
CCACCTTCCAAGAACAAGAAGAAATATTCAAACGGGGATAGAAATGAAAGCAACAATTCA
AGTTCTAACGGTGACTCTGATGATTATGAGGAGGATAAGAAAATGCAGCATGGGAAAAAA
TCATCAAGAAAAGTTGTTATACGCAACATAAACTACATAGCCTCGAAGAGAAATGAACAA
AGTGTTCATAGCAGCACCGAGGATAGTTCGTCTGATGAGGATGGATCCACTGATGCAGGT
TCCCTCAGAAAGCAGGTAGAGGAAGCAGTTGGATCATGGGAGAGGCACCATAACTCAACG
TCTCGCAACAAGAAGAAACGAGATGGAAAGAAGAGAAACAACAGTGGGAGTATATCAAAT
GGTGTCTCTAAGGATGAAGTAACCAACATTGGTAAGAATTGGGATATCTTCCAGAACATT
CTTATGCAAGATGCAGATTCAAGAACCGATGACACGGGGCCAAAAGGTGTCCAGGAAGAG
TACTTGATGACAAAGAAAATGACTCCTTCATCTGATCCTCTTATTATAAATGAGAGAAAC
ATGGGACAGGGAGATGAAATCCCACGACAAAACATGTGGGAAGAGAAGAGGCGTGGACCA
GTTATTATAAGAGAGAGCACAGATGAAGAGTTGTTATTTTCGCATAGAACTCAGGAACCA
AAGGGCTATGCTCAGTCTATCTCGTCGAACATTGGCACTGAACGAGTTGTCCTTAAGAGC
CAAAAAGAAGAGGATTGGTTAGCTGGCAATCTACTAAATAAATCAACATATCAAGGAAAA
AGCTCAGATCAAAGTATCTTTGTTGGAGATTATGCTTCAGCCTCTCATGATGATCATTTG
CAAATGGGGAAAGATAAGAAAGGCGTTCAATTTGATGATTCCATTGTGGTTCGAGCCCAT
TCAGTTGATAGTGTGTCTGATTATCACCAACAGACTGACATTTTCATGGTTTCAGACATC
GTCGGAGCTGAACAAGTTAAGCACAACATGCCTAATCACGCGGAAGATAAGCTTGATCCT
TCTGATGCATGTGAACCAAACGATCTTTTCATGGTTCTTGGAAGAATTTCAGCTGCTGAG
CAAGTTTCAGCCTCTCGGGATACTGAAATGTATGACGAAAATGATGTCTTCCTGTCTGAA
ACTTTCAAGAGTCACACTGATGTCAGACCTGCTTCTGCTGATACAAAGCTTCAAACAAAA
GGCGAAGGAGCCAACAAAAGGATCGGTAAGGACCTTGGACGAAAGGCAGTTACCAAAGAA
CCAAAATCTAAACCTTCAGTAACCGGATCTCTTGGAAGGACTAAATCTGATACATCATCG
AGAATCAAGAAATCACCTTCCACATTTCAGAAGAGCAAAGCTGACAAGGACGAGGAGAGT
CGAAAGAAATTGGAACAATCATTATTGCAACGTCAAAAGAGAATCGCAGAAAGAAGTGGT
GCCACTGGTTTAACCAAAACAACATCAAGGAAGAATCCAAAAGAGTCAGCCACATCTTCA
AAAATTGAGAAACCAAAACCTGAGGCTCCAACTGAGGCAACCAATAGATTACAAAAAACA
GTTTTTAAGAGCTCCACTATAGAACGTCTCGCCTCTACAAGAACAGCTAAGGATCGATCC
ACCGAGTCAAAAACCACTCCAAGCAAGAAAGCAAGTCAAAAGGAGAACAAAGTGATTGCT
CCAACAAAGAAATCAGCTGGAAAAGAGAGTAATAAGCAAGGTCCCCGTAAGTCCAAGCCT
TCGGATACTAAAGGTCATTCTTCATCTGATCCTCCTCAGAAGGAAAAAGATAGCAACACT
GACATAAACTCAATGTTAAACGAACGTGGAGCAGAACTAAGTCCACAGGTATCTAATGAA
GTCATTGATGCTAAGAACATGGAGGAGGTACGTAGCATATCATTAATCGAGAAGAAGATA
GATACACCTATGCTTACTGCTGAACATTCAATAGATGACAAGAAACAAAGTCCTACCGAG
GCTGTAAAGTTTTCACTGTCTGAAGTTGAAACCTCAGAAGCAGTTGATAATGCTATTGGA
GTTATAAGCCCTCTGACTTCCTCTGTATCGAACGTGCATTTGGACACTCCGGTATGCCAA
GAGATATTCTCTAATGAAGTTTCCACCCCACCTCCAAATAATGAAATGAACCTCGAGACG
AATCAAGGAAGAAGGAAATGGACAACTGATGAAAGCTCACTAAAAGTTACTAAAGGATTC
AGAAAGCTTCTTTATTTTGGTCGAAAAAACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400022041
PEP Infomation

pacid=37434547 transcript=PGSC0003DMT400032434 locus=PGSC0003DMG400012458 ID=PGSC0003DMT400032434.v4.03 annot-version=v4.03
Sequence

MDSRTRLDYALFQLTPTRTRCDLVIFAGENSEKLASGLLEPFLIHLKSAKDQISKGGYSI
TLRPSITNVSWFTKATLQRFVKFVSTPEILERFVSIERDIMQIESEQANGSINVEGNASA
FDGDSKFSPGFSKSNGESNGVGDAAKEENPKVRLQRVLESRKAVLRKEQAMAYARALVSG
FDMDNLDDLISFSNAFGALRLREACIKFMELCNKKRDDGMWMDEVAALQAYSPSEFSYFG
RSGITLSADVTQDNQSIGLSIRKQNDDTLSHGSLDTSQENGLPPPIKVHSTEGKSQPMWP
NNMPPYMQNYQNPAFQQIPPYPGYMFSGNPTYYPGMPWPANPEDSSRGPGPESDYNWKNK
PPSKNKKKYSNGDRNESNNSSSNGDSDDYEEDKKMQHGKKSSRKVVIRNINYIASKRNEQ
SVHSSTEDSSSDEDGSTDAGSLRKQVEEAVGSWERHHNSTSRNKKKRDGKKRNNSGSISN
GVSKDEVTNIGKNWDIFQNILMQDADSRTDDTGPKGVQEEYLMTKKMTPSSDPLIINERN
MGQGDEIPRQNMWEEKRRGPVIIRESTDEELLFSHRTQEPKGYAQSISSNIGTERVVLKS
QKEEDWLAGNLLNKSTYQGKSSDQSIFVGDYASASHDDHLQMGKDKKGVQFDDSIVVRAH
SVDSVSDYHQQTDIFMVSDIVGAEQVKHNMPNHAEDKLDPSDACEPNDLFMVLGRISAAE
QVSASRDTEMYDENDVFLSETFKSHTDVRPASADTKLQTKGEGANKRIGKDLGRKAVTKE
PKSKPSVTGSLGRTKSDTSSRIKKSPSTFQKSKADKDEESRKKLEQSLLQRQKRIAERSG
ATGLTKTTSRKNPKESATSSKIEKPKPEAPTEATNRLQKTVFKSSTIERLASTRTAKDRS
TESKTTPSKKASQKENKVIAPTKKSAGKESNKQGPRKSKPSDTKGHSSSDPPQKEKDSNT
DINSMLNERGAELSPQVSNEVIDAKNMEEVRSISLIEKKIDTPMLTAEHSIDDKKQSPTE
AVKFSLSEVETSEAVDNAIGVISPLTSSVSNVHLDTPVCQEIFSNEVSTPPPNNEMNLET
NQGRRKWTTDESSLKVTKGFRKLLYFGRKN*

Transcript Sequence

Transcript ID

PGSC0003DMT400032434
Transcript Infomation

pacid=37434547 locus=PGSC0003DMG400012458 ID=PGSC0003DMT400032434.v4.03 annot-version=v4.03
Sequence

ATGGATTCGAGGACTCGTTTGGATTATGCTCTGTTTCAGCTTACTCCAACACGAACAAGA
TGCGATCTTGTAATCTTTGCTGGTGAAAATTCGGAGAAATTAGCTTCTGGTTTGCTTGAA
CCATTTCTCATTCATCTCAAATCCGCTAAAGATCAGATTTCTAAAGGAGGATATTCAATT
ACTCTCCGACCTTCGATTACTAATGTTTCTTGGTTCACTAAAGCAACTTTACAGAGGTTT
GTGAAATTTGTTAGTACTCCTGAAATTCTCGAACGATTTGTAAGCATAGAAAGAGATATT
ATGCAGATTGAGAGTGAACAAGCTAATGGTAGTATCAATGTTGAAGGAAATGCATCAGCT
TTTGATGGAGATTCCAAATTCTCTCCTGGTTTTTCAAAGTCCAATGGTGAATCTAATGGT
GTTGGTGATGCTGCAAAAGAAGAAAATCCCAAAGTGCGTCTTCAACGCGTTCTAGAAAGC
AGAAAAGCAGTTTTAAGGAAAGAGCAAGCAATGGCATATGCTCGTGCTTTGGTATCTGGC
TTTGATATGGATAATTTGGATGATCTCATATCTTTTTCCAATGCTTTTGGTGCTCTACGT
TTAAGAGAAGCATGCATTAAGTTTATGGAGCTATGCAACAAAAAGAGAGATGATGGAATG
TGGATGGATGAAGTTGCTGCTCTTCAAGCCTACTCTCCTTCTGAGTTTTCGTATTTTGGG
AGGTCTGGAATCACGCTTTCTGCTGATGTTACTCAAGACAATCAAAGTATTGGCCTTTCC
ATCAGAAAACAGAATGATGATACCTTAAGTCATGGAAGTTTGGATACTAGTCAAGAAAAT
GGTTTACCACCACCTATCAAAGTTCACTCAACAGAAGGGAAATCACAACCAATGTGGCCA
AACAATATGCCACCTTACATGCAAAACTATCAAAATCCTGCATTTCAACAAATTCCACCA
TATCCAGGGTACATGTTTTCGGGCAATCCTACTTACTATCCTGGAATGCCATGGCCTGCA
AATCCGGAAGATTCTAGTCGAGGTCCCGGTCCTGAATCAGATTATAATTGGAAGAATAAA
CCACCTTCCAAGAACAAGAAGAAATATTCAAACGGGGATAGAAATGAAAGCAACAATTCA
AGTTCTAACGGTGACTCTGATGATTATGAGGAGGATAAGAAAATGCAGCATGGGAAAAAA
TCATCAAGAAAAGTTGTTATACGCAACATAAACTACATAGCCTCGAAGAGAAATGAACAA
AGTGTTCATAGCAGCACCGAGGATAGTTCGTCTGATGAGGATGGATCCACTGATGCAGGT
TCCCTCAGAAAGCAGGTAGAGGAAGCAGTTGGATCATGGGAGAGGCACCATAACTCAACG
TCTCGCAACAAGAAGAAACGAGATGGAAAGAAGAGAAACAACAGTGGGAGTATATCAAAT
GGTGTCTCTAAGGATGAAGTAACCAACATTGGTAAGAATTGGGATATCTTCCAGAACATT
CTTATGCAAGATGCAGATTCAAGAACCGATGACACGGGGCCAAAAGGTGTCCAGGAAGAG
TACTTGATGACAAAGAAAATGACTCCTTCATCTGATCCTCTTATTATAAATGAGAGAAAC
ATGGGACAGGGAGATGAAATCCCACGACAAAACATGTGGGAAGAGAAGAGGCGTGGACCA
GTTATTATAAGAGAGAGCACAGATGAAGAGTTGTTATTTTCGCATAGAACTCAGGAACCA
AAGGGCTATGCTCAGTCTATCTCGTCGAACATTGGCACTGAACGAGTTGTCCTTAAGAGC
CAAAAAGAAGAGGATTGGTTAGCTGGCAATCTACTAAATAAATCAACATATCAAGGAAAA
AGCTCAGATCAAAGTATCTTTGTTGGAGATTATGCTTCAGCCTCTCATGATGATCATTTG
CAAATGGGGAAAGATAAGAAAGGCGTTCAATTTGATGATTCCATTGTGGTTCGAGCCCAT
TCAGTTGATAGTGTGTCTGATTATCACCAACAGACTGACATTTTCATGGTTTCAGACATC
GTCGGAGCTGAACAAGTTAAGCACAACATGCCTAATCACGCGGAAGATAAGCTTGATCCT
TCTGATGCATGTGAACCAAACGATCTTTTCATGGTTCTTGGAAGAATTTCAGCTGCTGAG
CAAGTTTCAGCCTCTCGGGATACTGAAATGTATGACGAAAATGATGTCTTCCTGTCTGAA
ACTTTCAAGAGTCACACTGATGTCAGACCTGCTTCTGCTGATACAAAGCTTCAAACAAAA
GGCGAAGGAGCCAACAAAAGGATCGGTAAGGACCTTGGACGAAAGGCAGTTACCAAAGAA
CCAAAATCTAAACCTTCAGTAACCGGATCTCTTGGAAGGACTAAATCTGATACATCATCG
AGAATCAAGAAATCACCTTCCACATTTCAGAAGAGCAAAGCTGACAAGGACGAGGAGAGT
CGAAAGAAATTGGAACAATCATTATTGCAACGTCAAAAGAGAATCGCAGAAAGAAGTGGT
GCCACTGGTTTAACCAAAACAACATCAAGGAAGAATCCAAAAGAGTCAGCCACATCTTCA
AAAATTGAGAAACCAAAACCTGAGGCTCCAACTGAGGCAACCAATAGATTACAAAAAACA
GTTTTTAAGAGCTCCACTATAGAACGTCTCGCCTCTACAAGAACAGCTAAGGATCGATCC
ACCGAGTCAAAAACCACTCCAAGCAAGAAAGCAAGTCAAAAGGAGAACAAAGTGATTGCT
CCAACAAAGAAATCAGCTGGAAAAGAGAGTAATAAGCAAGGTCCCCGTAAGTCCAAGCCT
TCGGATACTAAAGGTCATTCTTCATCTGATCCTCCTCAGAAGGAAAAAGATAGCAACACT
GACATAAACTCAATGTTAAACGAACGTGGAGCAGAACTAAGTCCACAGGTATCTAATGAA
GTCATTGATGCTAAGAACATGGAGGAGGTACGTAGCATATCATTAATCGAGAAGAAGATA
GATACACCTATGCTTACTGCTGAACATTCAATAGATGACAAGAAACAAAGTCCTACCGAG
GCTGTAAAGTTTTCACTGTCTGAAGTTGAAACCTCAGAAGCAGTTGATAATGCTATTGGA
GTTATAAGCCCTCTGACTTCCTCTGTATCGAACGTGCATTTGGACACTCCGGTATGCCAA
GAGATATTCTCTAATGAAGTTTCCACCCCACCTCCAAATAATGAAATGAACCTCGAGACG
AATCAAGGAAGAAGGAAATGGACAACTGATGAAAGCTCACTAAAAGTTACTAAAGGATTC
AGAAAGCTTCTTTATTTTGGTCGAAAAAACTGA