Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032430
CDS Infomation

pacid=37431846 polypeptide=PGSC0003DMP400022038 locus=PGSC0003DMG401012456 ID=PGSC0003DMT400032430.v4.03 annot-version=v4.03
Sequence

ATGAGCAAAACCAGAGACGAAGAAGAAGAGGACGAGCGATTTCACGACTCACTTGACCGG
TTACTTTCTTCTACTAATACTTCTTGTTCTTCATCTCCTTCTTCTGATAACGAAGAAGAC
GATATTAAGGATCTTAGTTTCAATTTGGGGTCTCCTAACTATGGTGTTTCGGAGCCGCTT
CCGGTACCGAGATTCCCAAGGGGTGTATCGAATAACTATGATGTATGGATCTCTGAACCC
ATCTCCGTTGATGAACGACGTATTAGACTCCTCAGTCAAATGGGTCTTGCCCGTGACCCT
TCTCTCCTCCGCCACAGGCCGTCACTCTCACAGTCTGCTGCTGCTGACTACGATTTTGAC
GAAAGACCGGACATTTTTGGCAGATCGGTTTCAGAAAATCTTTTGAAGTGTCCACTTGCC
GGCGGTGAGGGTATTTCTAATAGTATTAATTCCAAAATTAGTTGTATTGAGAGTAATGTT
TGTGGGATCATTAGATCAAAATCGGATGGTGATCGTAATTGCTCAAATTGTTGTTGTTCT
CATTCAGTTCACAAAAATACTGAAGTTATTTCCTTGAATTCTACTTCCATTTCATCAGTA
CAAGTACATATGGCCAATGGGGTTGACGGTATAGTTGTACATAATAACCGAAACCGTAGT
AAAAGTCTCTGCGAGGATCTATTTCGTAATGGCAATGGATCCCCGAAGAAGCCACCCACA
GGAAAGACGAGAGCTGATTCCACAAATAATGGGACCTGTAATTCGTTGCCGGTGCTGGCG
AATAATGAGGTGGAGGAAGGGTTGGAATCAAATGGAGATATCGGAATTGAAGAGCAGTTG
TGCACAATAAAGAATCTTGATGATGGGAAGGAGTTTGTGGTTAATGAAGTTAAGGAAGAT
GGGACTTTGAAAAAAGTCAAGGAAGTGGGTACAGGAAGGCAGTTGACCATAGAAGAGTTT
GAGATGTGTGTTGGGACATCACCAATTGTTCAAGAACTGATGAGAAGGCAGAATGTAGAG
GATGGGAATAAGGATAGTTTTGATGGTAATACAAATGAGGATGTTGAAACTGGATCCAAG
TCGAAGAAGAGGGGAAGTTGGTTGAAGAGTATCAAAAATGTGGCTGGTGCTATGACAGGT
TATAAGGAGCGACGGAGCAGTGATGAGAGGGATACATCATCTGAGAAGGGTGGCAGAAGG
TCAAGCTCGGCTACAGATGATAGTCAGGATGCTTCTTTTCATGGGCCTGAAAGAGTACGG
GTTCGGCAGTACGGGAAGTCCTGCAAAGAACTTACAGCACTGTATAAGAGCCAAGAGATA
CTGGCACATACTGGGGCTATTTGGACCATCAAATTTAGTTTGGACGGGAAGTATCTCGCT
AGTGCTGGTGAGGACTGTATAATACATGTCTGGCAGGTTACTGAATCAGAGAGGAAGGGT
GACCTATTGCTTGATAAACCAGAAGACGGGAATTTAAATCTCTTGCTTTTGGCAAATGGA
TCTCCAGAGCCAACTACAATGTCACCAAATGATGGCCACCCGGAGAAGAAAAGAAGAGGA
AGGTTGTCTATAAGTCGAAAATCAGTGAGCTATGACCATGTTTTGGTACCGGAAACTGTT
TTCGCACTTTCAGAAAAGCCCATCTCTTCATTTCAGGGGCATGTGGATGATGTGCTTGAC
CTCTCATGGTCCAAGTCTCAGCATTTGCTTTCATCTTCAATGGACAAAACAGTGCGGCTG
TGGCATTTGTCTAGCAAGTCTTGTTTGAAGGTCTTCTCACATAGTGATTATGTAACCTGC
ATCCAGTTTAATCCTGTTGATGATAGATACTTTATCAGTGGATCCCTAGATGCTAAGGTT
CGCATATGGAGCATTCCAGAGAGGCAAGTTGTTGATTGGAATGATCTGCATGAGATGGTC
ACTGCCGCTTGCTATACACCAGATGGTCAGGGTGCATTTGTTGGTTCATACAAGGGGAAT
TGTTGTCAATACAACACATCAGATAATAAATTGCAGAAAAAAGTTCAAATCAATCTGCAG
AATAAGAAGAAGAAGGCTCACCAGAAGAAAATTACTGGTTTCCAGTTTGTGCCAGGGAGT
ACCTCAGAAGTGCTTATAACATCTGCAGATTCGAGAATTCGGGTGGTTGATGGTGTTGAT
CTTGTCCACAAGTTCAAAGGTTTTCGCAATACAAACAGCCAAATCTCAGCCTCTGTGACT
GCTGATGGTAGATATGTGGTCTGTGCCAGTGAGGACTCACATGTCTATATCTGGAAACAT
GAAGGTGATTCTCGACCAAGCAGGAATAGAGGCGTTACCATTACACAGTCGTATGAGCAT
TTCCATTGTCAAGATGTTTCAGTGGCCATTCCTTGGCCTGGCATATCCGATAATTTGAGA
CTTTCCGATTCCTCGTTAGGGGAACAAAATGGGCATGCTGATCATCTCGACGAGGTTTCC
ACTGCCAACCATTCTCCTACACCCATTGAAGAGAATGGCACCGAGTGCTCACCTCTGGTA
TCTGGCTGCAGTAACAGTCCTCTTCATGGGACTTTAAGTGGTGCCATGAACAGCTACTTC
TTTGATAAATTCTCAGCAACATGGCCCGAGGAAAAACTCCTGTTAGCTACTAAAAATCGT
AGCCCTCGTGTCAGTGTAGATACTAGTGTCGACTTCTCCAATGGTTTAAATCAATCCAAG
TCTGCCTGGGGTTTTGTCATTGTAACCGCAGGCCGAAGAGGGGAAATCAGGACTTTCCAA
AATTTTGGACTGCCAATCCGAATATAG

Peptide Sequence

PEP ID

PGSC0003DMP400022038
PEP Infomation

pacid=37431846 transcript=PGSC0003DMT400032430 locus=PGSC0003DMG401012456 ID=PGSC0003DMT400032430.v4.03 annot-version=v4.03
Sequence

MSKTRDEEEEDERFHDSLDRLLSSTNTSCSSSPSSDNEEDDIKDLSFNLGSPNYGVSEPL
PVPRFPRGVSNNYDVWISEPISVDERRIRLLSQMGLARDPSLLRHRPSLSQSAAADYDFD
ERPDIFGRSVSENLLKCPLAGGEGISNSINSKISCIESNVCGIIRSKSDGDRNCSNCCCS
HSVHKNTEVISLNSTSISSVQVHMANGVDGIVVHNNRNRSKSLCEDLFRNGNGSPKKPPT
GKTRADSTNNGTCNSLPVLANNEVEEGLESNGDIGIEEQLCTIKNLDDGKEFVVNEVKED
GTLKKVKEVGTGRQLTIEEFEMCVGTSPIVQELMRRQNVEDGNKDSFDGNTNEDVETGSK
SKKRGSWLKSIKNVAGAMTGYKERRSSDERDTSSEKGGRRSSSATDDSQDASFHGPERVR
VRQYGKSCKELTALYKSQEILAHTGAIWTIKFSLDGKYLASAGEDCIIHVWQVTESERKG
DLLLDKPEDGNLNLLLLANGSPEPTTMSPNDGHPEKKRRGRLSISRKSVSYDHVLVPETV
FALSEKPISSFQGHVDDVLDLSWSKSQHLLSSSMDKTVRLWHLSSKSCLKVFSHSDYVTC
IQFNPVDDRYFISGSLDAKVRIWSIPERQVVDWNDLHEMVTAACYTPDGQGAFVGSYKGN
CCQYNTSDNKLQKKVQINLQNKKKKAHQKKITGFQFVPGSTSEVLITSADSRIRVVDGVD
LVHKFKGFRNTNSQISASVTADGRYVVCASEDSHVYIWKHEGDSRPSRNRGVTITQSYEH
FHCQDVSVAIPWPGISDNLRLSDSSLGEQNGHADHLDEVSTANHSPTPIEENGTECSPLV
SGCSNSPLHGTLSGAMNSYFFDKFSATWPEEKLLLATKNRSPRVSVDTSVDFSNGLNQSK
SAWGFVIVTAGRRGEIRTFQNFGLPIRI*

Transcript Sequence

Transcript ID

PGSC0003DMT400032430
Transcript Infomation

pacid=37431846 locus=PGSC0003DMG401012456 ID=PGSC0003DMT400032430.v4.03 annot-version=v4.03
Sequence

ATGAGCAAAACCAGAGACGAAGAAGAAGAGGACGAGCGATTTCACGACTCACTTGACCGG
TTACTTTCTTCTACTAATACTTCTTGTTCTTCATCTCCTTCTTCTGATAACGAAGAAGAC
GATATTAAGGATCTTAGTTTCAATTTGGGGTCTCCTAACTATGGTGTTTCGGAGCCGCTT
CCGGTACCGAGATTCCCAAGGGGTGTATCGAATAACTATGATGTATGGATCTCTGAACCC
ATCTCCGTTGATGAACGACGTATTAGACTCCTCAGTCAAATGGGTCTTGCCCGTGACCCT
TCTCTCCTCCGCCACAGGCCGTCACTCTCACAGTCTGCTGCTGCTGACTACGATTTTGAC
GAAAGACCGGACATTTTTGGCAGATCGGTTTCAGAAAATCTTTTGAAGTGTCCACTTGCC
GGCGGTGAGGGTATTTCTAATAGTATTAATTCCAAAATTAGTTGTATTGAGAGTAATGTT
TGTGGGATCATTAGATCAAAATCGGATGGTGATCGTAATTGCTCAAATTGTTGTTGTTCT
CATTCAGTTCACAAAAATACTGAAGTTATTTCCTTGAATTCTACTTCCATTTCATCAGTA
CAAGTACATATGGCCAATGGGGTTGACGGTATAGTTGTACATAATAACCGAAACCGTAGT
AAAAGTCTCTGCGAGGATCTATTTCGTAATGGCAATGGATCCCCGAAGAAGCCACCCACA
GGAAAGACGAGAGCTGATTCCACAAATAATGGGACCTGTAATTCGTTGCCGGTGCTGGCG
AATAATGAGGTGGAGGAAGGGTTGGAATCAAATGGAGATATCGGAATTGAAGAGCAGTTG
TGCACAATAAAGAATCTTGATGATGGGAAGGAGTTTGTGGTTAATGAAGTTAAGGAAGAT
GGGACTTTGAAAAAAGTCAAGGAAGTGGGTACAGGAAGGCAGTTGACCATAGAAGAGTTT
GAGATGTGTGTTGGGACATCACCAATTGTTCAAGAACTGATGAGAAGGCAGAATGTAGAG
GATGGGAATAAGGATAGTTTTGATGGTAATACAAATGAGGATGTTGAAACTGGATCCAAG
TCGAAGAAGAGGGGAAGTTGGTTGAAGAGTATCAAAAATGTGGCTGGTGCTATGACAGGT
TATAAGGAGCGACGGAGCAGTGATGAGAGGGATACATCATCTGAGAAGGGTGGCAGAAGG
TCAAGCTCGGCTACAGATGATAGTCAGGATGCTTCTTTTCATGGGCCTGAAAGAGTACGG
GTTCGGCAGTACGGGAAGTCCTGCAAAGAACTTACAGCACTGTATAAGAGCCAAGAGATA
CTGGCACATACTGGGGCTATTTGGACCATCAAATTTAGTTTGGACGGGAAGTATCTCGCT
AGTGCTGGTGAGGACTGTATAATACATGTCTGGCAGGTTACTGAATCAGAGAGGAAGGGT
GACCTATTGCTTGATAAACCAGAAGACGGGAATTTAAATCTCTTGCTTTTGGCAAATGGA
TCTCCAGAGCCAACTACAATGTCACCAAATGATGGCCACCCGGAGAAGAAAAGAAGAGGA
AGGTTGTCTATAAGTCGAAAATCAGTGAGCTATGACCATGTTTTGGTACCGGAAACTGTT
TTCGCACTTTCAGAAAAGCCCATCTCTTCATTTCAGGGGCATGTGGATGATGTGCTTGAC
CTCTCATGGTCCAAGTCTCAGCATTTGCTTTCATCTTCAATGGACAAAACAGTGCGGCTG
TGGCATTTGTCTAGCAAGTCTTGTTTGAAGGTCTTCTCACATAGTGATTATGTAACCTGC
ATCCAGTTTAATCCTGTTGATGATAGATACTTTATCAGTGGATCCCTAGATGCTAAGGTT
CGCATATGGAGCATTCCAGAGAGGCAAGTTGTTGATTGGAATGATCTGCATGAGATGGTC
ACTGCCGCTTGCTATACACCAGATGGTCAGGGTGCATTTGTTGGTTCATACAAGGGGAAT
TGTTGTCAATACAACACATCAGATAATAAATTGCAGAAAAAAGTTCAAATCAATCTGCAG
AATAAGAAGAAGAAGGCTCACCAGAAGAAAATTACTGGTTTCCAGTTTGTGCCAGGGAGT
ACCTCAGAAGTGCTTATAACATCTGCAGATTCGAGAATTCGGGTGGTTGATGGTGTTGAT
CTTGTCCACAAGTTCAAAGGTTTTCGCAATACAAACAGCCAAATCTCAGCCTCTGTGACT
GCTGATGGTAGATATGTGGTCTGTGCCAGTGAGGACTCACATGTCTATATCTGGAAACAT
GAAGGTGATTCTCGACCAAGCAGGAATAGAGGCGTTACCATTACACAGTCGTATGAGCAT
TTCCATTGTCAAGATGTTTCAGTGGCCATTCCTTGGCCTGGCATATCCGATAATTTGAGA
CTTTCCGATTCCTCGTTAGGGGAACAAAATGGGCATGCTGATCATCTCGACGAGGTTTCC
ACTGCCAACCATTCTCCTACACCCATTGAAGAGAATGGCACCGAGTGCTCACCTCTGGTA
TCTGGCTGCAGTAACAGTCCTCTTCATGGGACTTTAAGTGGTGCCATGAACAGCTACTTC
TTTGATAAATTCTCAGCAACATGGCCCGAGGAAAAACTCCTGTTAGCTACTAAAAATCGT
AGCCCTCGTGTCAGTGTAGATACTAGTGTCGACTTCTCCAATGGTTTAAATCAATCCAAG
TCTGCCTGGGGTTTTGTCATTGTAACCGCAGGCCGAAGAGGGGAAATCAGGACTTTCCAA
AATTTTGGACTGCCAATCCGAATATAG