Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032418
CDS Infomation

pacid=37431175 polypeptide=PGSC0003DMP400022029 locus=PGSC0003DMG400012452 ID=PGSC0003DMT400032418.v4.03 annot-version=v4.03
Sequence

ATGGCGAAGAAGAAAGAGAGGTCGGTGAATGTATCGGGAAAGCCAAAGCATTCCTTGGAC
TCCAATAGGGATGTCGGCGCAGCCAAAAATGGCCGTAGCGCCGCTACTGTGCGGCGGCTC
AAGATGTACAATACGAGGCCGAAGCGTAATCCTCAGGGTCACATAATTAAGCATGACTTA
CAATCAAAGGAGCTGCCATCAACAAGGATACAACCAGATCGTCGTTGGTTCGGTAATACT
CGGGTGGTCAACCAGAAGGCACTGGAGTTCTTTAGAGAAGAGCTCCAAACTCGGCTTTCC
AGTAACTACAATGTTATATTAAAAGAAAGGAAGTTGCCCATGTCCCTTTTAAATGATCAT
CAGAAGCAAGTAAAAGTTCATCTTCTTGACAACGAGCCTTTCGCTGATGCTTTTGGACCA
AAAACAAAGAGGAAACGCCCCAAACTTATGGCATTAGATTATGAAGCTTTAGTGAAGAAG
GTTGATGTGTCTCATGATGATTTTGAAGACAAACATGGTGCTAGCACCTCCGTGGATGAA
AATGCAGATGGATTCAGAGATCTTGTTAGGCACACAATGTTTGAGAAAGGACAAAGTAAA
CGAATTTGGAGCGAGCTCTACAAAGTCATAGACTCTTCTGATGTTGTTGTTCAGGTTCTT
GATGCCAGAGACCCCTATGGTACAAGGTGCTACCATTTGGAGAAACATTTGAAAGAAAAT
TGCAAGCACAAACATATGGTCCTTTTGCTTAATAAGTGTGATTTGGTCCCTGCTTGGGCA
ACAAAGGGATGGCTTAGAGTGCTCTCCAAGGAATATCCAACTTTGGCATTTCATGCAAGT
GTCACCAAGTCCTTTGGAAAGGGTTCTCTTTTGTCAGTGCTGAGACAGTTTTCTCGACTA
AAGAGCGATAAGCAAGCAATCTCTGTTGGTTTTATAGGCTATCCCAATGTTGGCAAGTCA
TCAGTTATTAATACATTGCGCACAAAGAATGTTTGCAAGGTGGCTCCTATCCCAGGAGAG
ACTAAAGTGTGGCAGTACATTACACTCACAAAGAGGATCTTCTTGATTGACTGTCCTGGT
GTAGTTTATCAGAATCATGATTCCGAAACAGATATAGTCTTGAAGGGCGTGGTACGAGTG
ACAAACCTTCCTGATGCTTCTGAACACATTAGCGAAGTGTTGAATCGCGTTAAGAAGGAG
CATCTTGAAAGAGCTTATAAGATAAAGAATTGGGTTGACGAGTATGACTTTCTTCAACAG
CTATGCAAGTTAACAGGCAAACTTCTGAAGGGAGGCGAACCTGACTATAAGACTGCTGCC
AAGATGGTTCTCCATGATTGGCAAAGAGGCAAAATTCCTTTCTTTGTTCCACCTCCAAAG
CTGGATGATGAGCAAAATGAACTTGTCGCTGAGGCAGACACAGCCGTGGATAACGATCAG
GCCACAGCTGCTCTCAAAGCTATTGCTGATGTCGTTTCATCACAACAACTGAAGGAAGTT
CCTGTTCAGGAGGAACTATTTAGTAAGGCTGAGCTGTTGGGTGAAAATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400022029
PEP Infomation

pacid=37431175 transcript=PGSC0003DMT400032418 locus=PGSC0003DMG400012452 ID=PGSC0003DMT400032418.v4.03 annot-version=v4.03
Sequence

MAKKKERSVNVSGKPKHSLDSNRDVGAAKNGRSAATVRRLKMYNTRPKRNPQGHIIKHDL
QSKELPSTRIQPDRRWFGNTRVVNQKALEFFREELQTRLSSNYNVILKERKLPMSLLNDH
QKQVKVHLLDNEPFADAFGPKTKRKRPKLMALDYEALVKKVDVSHDDFEDKHGASTSVDE
NADGFRDLVRHTMFEKGQSKRIWSELYKVIDSSDVVVQVLDARDPYGTRCYHLEKHLKEN
CKHKHMVLLLNKCDLVPAWATKGWLRVLSKEYPTLAFHASVTKSFGKGSLLSVLRQFSRL
KSDKQAISVGFIGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPG
VVYQNHDSETDIVLKGVVRVTNLPDASEHISEVLNRVKKEHLERAYKIKNWVDEYDFLQQ
LCKLTGKLLKGGEPDYKTAAKMVLHDWQRGKIPFFVPPPKLDDEQNELVAEADTAVDNDQ
ATAALKAIADVVSSQQLKEVPVQEELFSKAELLGEN*

Transcript Sequence

Transcript ID

PGSC0003DMT400032418
Transcript Infomation

pacid=37431175 locus=PGSC0003DMG400012452 ID=PGSC0003DMT400032418.v4.03 annot-version=v4.03
Sequence

ATGGCGAAGAAGAAAGAGAGGTCGGTGAATGTATCGGGAAAGCCAAAGCATTCCTTGGAC
TCCAATAGGGATGTCGGCGCAGCCAAAAATGGCCGTAGCGCCGCTACTGTGCGGCGGCTC
AAGATGTACAATACGAGGCCGAAGCGTAATCCTCAGGGTCACATAATTAAGCATGACTTA
CAATCAAAGGAGCTGCCATCAACAAGGATACAACCAGATCGTCGTTGGTTCGGTAATACT
CGGGTGGTCAACCAGAAGGCACTGGAGTTCTTTAGAGAAGAGCTCCAAACTCGGCTTTCC
AGTAACTACAATGTTATATTAAAAGAAAGGAAGTTGCCCATGTCCCTTTTAAATGATCAT
CAGAAGCAAGTAAAAGTTCATCTTCTTGACAACGAGCCTTTCGCTGATGCTTTTGGACCA
AAAACAAAGAGGAAACGCCCCAAACTTATGGCATTAGATTATGAAGCTTTAGTGAAGAAG
GTTGATGTGTCTCATGATGATTTTGAAGACAAACATGGTGCTAGCACCTCCGTGGATGAA
AATGCAGATGGATTCAGAGATCTTGTTAGGCACACAATGTTTGAGAAAGGACAAAGTAAA
CGAATTTGGAGCGAGCTCTACAAAGTCATAGACTCTTCTGATGTTGTTGTTCAGGTTCTT
GATGCCAGAGACCCCTATGGTACAAGGTGCTACCATTTGGAGAAACATTTGAAAGAAAAT
TGCAAGCACAAACATATGGTCCTTTTGCTTAATAAGTGTGATTTGGTCCCTGCTTGGGCA
ACAAAGGGATGGCTTAGAGTGCTCTCCAAGGAATATCCAACTTTGGCATTTCATGCAAGT
GTCACCAAGTCCTTTGGAAAGGGTTCTCTTTTGTCAGTGCTGAGACAGTTTTCTCGACTA
AAGAGCGATAAGCAAGCAATCTCTGTTGGTTTTATAGGCTATCCCAATGTTGGCAAGTCA
TCAGTTATTAATACATTGCGCACAAAGAATGTTTGCAAGGTGGCTCCTATCCCAGGAGAG
ACTAAAGTGTGGCAGTACATTACACTCACAAAGAGGATCTTCTTGATTGACTGTCCTGGT
GTAGTTTATCAGAATCATGATTCCGAAACAGATATAGTCTTGAAGGGCGTGGTACGAGTG
ACAAACCTTCCTGATGCTTCTGAACACATTAGCGAAGTGTTGAATCGCGTTAAGAAGGAG
CATCTTGAAAGAGCTTATAAGATAAAGAATTGGGTTGACGAGTATGACTTTCTTCAACAG
CTATGCAAGTTAACAGGCAAACTTCTGAAGGGAGGCGAACCTGACTATAAGACTGCTGCC
AAGATGGTTCTCCATGATTGGCAAAGAGGCAAAATTCCTTTCTTTGTTCCACCTCCAAAG
CTGGATGATGAGCAAAATGAACTTGTCGCTGAGGCAGACACAGCCGTGGATAACGATCAG
GCCACAGCTGCTCTCAAAGCTATTGCTGATGTCGTTTCATCACAACAACTGAAGGAAGTT
CCTGTTCAGGAGGAACTATTTAGTAAGGCTGAGCTGTTGGGTGAAAATTGA