Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032417
CDS Infomation

pacid=37434253 polypeptide=PGSC0003DMP400022028 locus=PGSC0003DMG400012451 ID=PGSC0003DMT400032417.v4.03 annot-version=v4.03
Sequence

ATGTCTGGAGAAGATACACAAGAACTTCGTTCGTTGGCCTTGACACCAACATGGTCTGTT
GCTTCTGTATTGACTATATTTGTTGCTGTTTCACTGCTTGTGGAGCGATCCATTCACAGG
TTATCTAATTGGTTGAGGAAAACCAATAGAAAGCCATTGTTAGCTGCTGTGGAGAAAATG
AAAGAAGAGTTGATGCTTCTTGGATTCATTTCTCTCCTTCTCACAGCAACTTCCAGCATC
ATATCTAATATTTGCATACCGTCAAAGTTTTACAATAATGCATTTGCTCCATGTACAAAG
TCTGAAGTTGATGAAGAAATGGAGAATAAAGATTTGAAGGAGCGTAAACTTTTGATGGCT
TTTGGTCTTCATAGGAGAGTATTAAATTCCTTCAATCAAAATACGTGTGGAGAGAACCAT
GAACCTTTTGTATCATATGAAGGCCTTGAGCAGCTGCATCGCTTCATCTTCGTCATGGCC
ATTACTCATATATCTTATAGTTGCTTGACAATGCTGCTGGCGATTGTTAAGGTCCACAGT
TGGAGGGTGTGGGAAGATCAAGCGCAGAATGACAGGCATGATGTACTAACTGACATTTCT
AGAGCCAAGACATTCCGAAGGCAGTCGACTTTTGTCAGAGTTCATACATCAAGTCCACTT
GCCAGGAACCATTTCCTTGTTTGGGTGACCTGTTTCTTCCGGCAGTTTGGCCGCACAGTT
GTTCGTGCTGATTACCTTACTCTGCGCAAGGGTTTTATCATGAATCACAACCTTACATCA
AACTATGATTTTCACAGCTATATGATTCGCTCGATGGAAGAAGAATTCCAAAGAATAGTT
GGTGTAAGTGGCCCTCTCTGGGGATTCGTGGTGGGTTTTATGCTGTTTAATGTAAAAGGA
TCGAATCTGTATTTCTGGATAGCGTTAATTCCTATCATTCTTGTACTACTCGTGGGTACA
AAACTGCAGCATGTAATCGCAACCTTGGCATTGGAGAGTGCTGCAATTACTGGCTCATTC
TCAAGGGCCAAGCTAAAACCACGAGACGAACTTTTTTGGTTCAAAAAACCAGAATTACTT
TTGTCCTTGATTCATTTTGTCCTTTTCCAGAATGCATTTGAGCTAGCTTCATTTTTTTGG
TTCTGGTGGCAATTTGGGTATAACTCATGCTTCATAAAGAACCACACACTTGTGTATCTA
CGACTCGTTATGGGGTTTGTTGGACAATTCCTTTGCAGTTATAGCACCTTGCCACTCTAT
GCCCTGGTTACACAGATGGGTACAAACTATAAGGCTGCATTGATTCCACAGAGAATAAGA
GAAACGATCCACGGATGGGGAAAGGCAGCAAGAAGAAAAAGGAGAATGCGTATGTTCCCA
GATGATTCAACTGTGCACACTGATACAAGCACCGTGATGTCCCTCGAGGAATATGATCAT
GACCAGTTGGTTGATAGCCCTCGAACAGTGCATGGTGCAGGTACAGAAATCGAGTTACAG
CCACCAACAACTGTCACGGAGGATCATCATTCAGTAACAATTAACGACACTTCAAGTCGT
ATTGGTACTCCTCTCCTTCGACCCTGTGCCTCTATTTCTTCCGCAACTTCCCCAAATCTT
CCACCTGAAGTAATATCAAGATCATCTTCAATGCCTGCTAGAGGACATTTGAGTTTGGGT
AAACAATTACCATTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400022028
PEP Infomation

pacid=37434253 transcript=PGSC0003DMT400032417 locus=PGSC0003DMG400012451 ID=PGSC0003DMT400032417.v4.03 annot-version=v4.03
Sequence

MSGEDTQELRSLALTPTWSVASVLTIFVAVSLLVERSIHRLSNWLRKTNRKPLLAAVEKM
KEELMLLGFISLLLTATSSIISNICIPSKFYNNAFAPCTKSEVDEEMENKDLKERKLLMA
FGLHRRVLNSFNQNTCGENHEPFVSYEGLEQLHRFIFVMAITHISYSCLTMLLAIVKVHS
WRVWEDQAQNDRHDVLTDISRAKTFRRQSTFVRVHTSSPLARNHFLVWVTCFFRQFGRTV
VRADYLTLRKGFIMNHNLTSNYDFHSYMIRSMEEEFQRIVGVSGPLWGFVVGFMLFNVKG
SNLYFWIALIPIILVLLVGTKLQHVIATLALESAAITGSFSRAKLKPRDELFWFKKPELL
LSLIHFVLFQNAFELASFFWFWWQFGYNSCFIKNHTLVYLRLVMGFVGQFLCSYSTLPLY
ALVTQMGTNYKAALIPQRIRETIHGWGKAARRKRRMRMFPDDSTVHTDTSTVMSLEEYDH
DQLVDSPRTVHGAGTEIELQPPTTVTEDHHSVTINDTSSRIGTPLLRPCASISSATSPNL
PPEVISRSSSMPARGHLSLGKQLPL*

Transcript Sequence

Transcript ID

PGSC0003DMT400032417
Transcript Infomation

pacid=37434253 locus=PGSC0003DMG400012451 ID=PGSC0003DMT400032417.v4.03 annot-version=v4.03
Sequence

ATGTCTGGAGAAGATACACAAGAACTTCGTTCGTTGGCCTTGACACCAACATGGTCTGTT
GCTTCTGTATTGACTATATTTGTTGCTGTTTCACTGCTTGTGGAGCGATCCATTCACAGG
TTATCTAATTGGTTGAGGAAAACCAATAGAAAGCCATTGTTAGCTGCTGTGGAGAAAATG
AAAGAAGAGTTGATGCTTCTTGGATTCATTTCTCTCCTTCTCACAGCAACTTCCAGCATC
ATATCTAATATTTGCATACCGTCAAAGTTTTACAATAATGCATTTGCTCCATGTACAAAG
TCTGAAGTTGATGAAGAAATGGAGAATAAAGATTTGAAGGAGCGTAAACTTTTGATGGCT
TTTGGTCTTCATAGGAGAGTATTAAATTCCTTCAATCAAAATACGTGTGGAGAGAACCAT
GAACCTTTTGTATCATATGAAGGCCTTGAGCAGCTGCATCGCTTCATCTTCGTCATGGCC
ATTACTCATATATCTTATAGTTGCTTGACAATGCTGCTGGCGATTGTTAAGGTCCACAGT
TGGAGGGTGTGGGAAGATCAAGCGCAGAATGACAGGCATGATGTACTAACTGACATTTCT
AGAGCCAAGACATTCCGAAGGCAGTCGACTTTTGTCAGAGTTCATACATCAAGTCCACTT
GCCAGGAACCATTTCCTTGTTTGGGTGACCTGTTTCTTCCGGCAGTTTGGCCGCACAGTT
GTTCGTGCTGATTACCTTACTCTGCGCAAGGGTTTTATCATGAATCACAACCTTACATCA
AACTATGATTTTCACAGCTATATGATTCGCTCGATGGAAGAAGAATTCCAAAGAATAGTT
GGTGTAAGTGGCCCTCTCTGGGGATTCGTGGTGGGTTTTATGCTGTTTAATGTAAAAGGA
TCGAATCTGTATTTCTGGATAGCGTTAATTCCTATCATTCTTGTACTACTCGTGGGTACA
AAACTGCAGCATGTAATCGCAACCTTGGCATTGGAGAGTGCTGCAATTACTGGCTCATTC
TCAAGGGCCAAGCTAAAACCACGAGACGAACTTTTTTGGTTCAAAAAACCAGAATTACTT
TTGTCCTTGATTCATTTTGTCCTTTTCCAGAATGCATTTGAGCTAGCTTCATTTTTTTGG
TTCTGGTGGCAATTTGGGTATAACTCATGCTTCATAAAGAACCACACACTTGTGTATCTA
CGACTCGTTATGGGGTTTGTTGGACAATTCCTTTGCAGTTATAGCACCTTGCCACTCTAT
GCCCTGGTTACACAGATGGGTACAAACTATAAGGCTGCATTGATTCCACAGAGAATAAGA
GAAACGATCCACGGATGGGGAAAGGCAGCAAGAAGAAAAAGGAGAATGCGTATGTTCCCA
GATGATTCAACTGTGCACACTGATACAAGCACCGTGATGTCCCTCGAGGAATATGATCAT
GACCAGTTGGTTGATAGCCCTCGAACAGTGCATGGTGCAGGTACAGAAATCGAGTTACAG
CCACCAACAACTGTCACGGAGGATCATCATTCAGTAACAATTAACGACACTTCAAGTCGT
ATTGGTACTCCTCTCCTTCGACCCTGTGCCTCTATTTCTTCCGCAACTTCCCCAAATCTT
CCACCTGAAGTAATATCAAGATCATCTTCAATGCCTGCTAGAGGACATTTGAGTTTGGGT
AAACAATTACCATTATAG