Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032407
CDS Infomation

pacid=37433268 polypeptide=PGSC0003DMP400022020 locus=PGSC0003DMG400012447 ID=PGSC0003DMT400032407.v4.03 annot-version=v4.03
Sequence

ATGGGTTGTGTTTGTGGTAAGCCATCTGCCATTGAAGACAGTAGAGATAGTCCAAGGGAG
AGGCTGTCAAGTAAAAGTGCTGCAAGTTTGAGAGGGCCAAGAACTGGTGGTTCATCAAGA
AGAGAGGAAGCTTATAGAGTCAAAGATCGGTTGGATAGCATTGATGGGAAGGCAATGTTG
ATTGATAAACAAGTAAATGGTTCAGTAAGATTGCAGACTGAGAATCATGAGAGGAAAAGA
GAGAAGCAAGAGTTAATTGGGACATTACCTAAAAGCAGTGAAGGGGAACAGGTTGCTGCT
GGATGGCCACCCTGGCTTGCTGCTGTTGCTGGAGAAGCTATCAGAGGATGGGTGCCTAGA
CGAGCAGATTCCTTTGAGAAATTGGATAAAATTGGTCAGGGCACCTACAGCAACGTTTAC
CGTGCTCGTGATCTTGATCAAGGGAAGATCGTTGCATTGAAGAAAGTGAGATTTGATAAT
CTAGAACCTGAGAGTGTTCGGTTCATGGCTAGGGAGATTCACATATTACGGAGGCTTGAT
CATCCAAACATAATAAAACTAGAAGGTTTAGTTACTTCTAGGATGTCCTGCAGCCTGTAC
CTTGTATTTGAGTACATGGAGCATGATCTGGCAGGGCTAGCATCACATCCTGGTCTTAAG
TTTACTGAGTCACAGGTCAAATGTTACATGCAACAACTTTTACGGGGACTTGATCATTGT
CACAGTCGTGGTGTCTTACATCGTGATATAAAAGGCTCCAACCTTTTAATTGACAATAAT
GGTGTATTAAAGATTGCTGACTTTGGTCTAGCAAGCTTTTTTGATCCTCATCAAAGCCAG
CCTCTTACTAGCCGTGTAGTGACTCTCTGGTATCGGCCTCCTGAACTGCTACTTGGTGCT
ACTTACTATGGTACTGCTGTGGATTTATGGAGTGCTGGTTGCATACTAGCAGAACTTTAT
GCTGGAAAGCCTATAATGCCAGGAAGAACAGAGGTTGAGCAGCTTCATAAGATTTTCAAA
CTGTGTGGATCACCTTCTGAGGAATACTGGAGGAAATCGAGGTTGCCACATGCAACAATT
TTCAAGCCCCAACAACCTTATAGGCGCTGTGTTGCAGAAACATTTAAAGAGTTCCCTGCA
CCAGCTCTAGCACTCATAGAAACCTTACTCTCCATAGATCCTGTTGATCGTGGGTCCTCA
GCTTCTGCCTTGAAGAGTGAGTTCTTTACAACAAAGCCACTTCCTTGTGATCCTTCAAGC
TTGCCAAAATATCCTCCGAGCAAGGAATTTGATGCAAAAGTCCGGGATGAAGAAGCCCGA
AGGCAAGCGGCTGCTGGAGGTAAGGGTCATAGATATGACCCAGAAAGGAGAGGAACGAGA
GAATCGCGTGCAGTTCCTGCACCCGAAGCCAATGCTGAGCTAGTTTCCTCTATGCAGAAA
AGACAAGGTCAATCCAATCCAAAAAGCAGAAGTGAGATGTTCAACTCTCATCCAGAAGAA
GTTGCCTCTGGTTTTCCAATTGACCCCCCTAGACCATCTCAAGTCATGGAAGAAGCAAGT
AATGATCCTCAGGCGCAGCTCCATAAGCGAGGTTCCCATTCCGGGCCATTGTCTCACCGA
GCTGCTTGGGCAAAAGCTGGAAAGAATATGGATGATGCCCCAAAGCTATCTGTAGCGGAC
TTGTCATCTATGTCTGGGCTAGTCGCTGCAAGGAGAAGCATGTTCTCTGAAGATCGGTCA
GATAAGTCGGGCTCACACAAACAGGAGGTTCCTAAACTTATAGCCAGGTTTCCCGGATCC
TATAAAGAGGTTTCACATTCCACAATGAAACAAGAGCAGAAAAATCATGCACTTGCCAGC
TCACATCATCAAAATGAGGACGGTAGAACCAGCAACAATGATCCCGTTCTTTTGGGATAT
GGATCAAAAGGCAACAAAATCCACTACTCTGGACCACTACTAGTTCCATCAGGCAAAATG
GATCAAGTGTTGAAAGATCACGATCGCCACATCCAAGAAGCTGTAAGACGAGCACGCTTG
GACAAGGCAAAAGCAAAGAAAATTCAGGTTGAAGGAAACAAATTATCAGCCAATTCATTA
TTTGTTTCTGGCCGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400022020
PEP Infomation

pacid=37433268 transcript=PGSC0003DMT400032407 locus=PGSC0003DMG400012447 ID=PGSC0003DMT400032407.v4.03 annot-version=v4.03
Sequence

MGCVCGKPSAIEDSRDSPRERLSSKSAASLRGPRTGGSSRREEAYRVKDRLDSIDGKAML
IDKQVNGSVRLQTENHERKREKQELIGTLPKSSEGEQVAAGWPPWLAAVAGEAIRGWVPR
RADSFEKLDKIGQGTYSNVYRARDLDQGKIVALKKVRFDNLEPESVRFMAREIHILRRLD
HPNIIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFTESQVKCYMQQLLRGLDHC
HSRGVLHRDIKGSNLLIDNNGVLKIADFGLASFFDPHQSQPLTSRVVTLWYRPPELLLGA
TYYGTAVDLWSAGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWRKSRLPHATI
FKPQQPYRRCVAETFKEFPAPALALIETLLSIDPVDRGSSASALKSEFFTTKPLPCDPSS
LPKYPPSKEFDAKVRDEEARRQAAAGGKGHRYDPERRGTRESRAVPAPEANAELVSSMQK
RQGQSNPKSRSEMFNSHPEEVASGFPIDPPRPSQVMEEASNDPQAQLHKRGSHSGPLSHR
AAWAKAGKNMDDAPKLSVADLSSMSGLVAARRSMFSEDRSDKSGSHKQEVPKLIARFPGS
YKEVSHSTMKQEQKNHALASSHHQNEDGRTSNNDPVLLGYGSKGNKIHYSGPLLVPSGKM
DQVLKDHDRHIQEAVRRARLDKAKAKKIQVEGNKLSANSLFVSGR*

Transcript Sequence

Transcript ID

PGSC0003DMT400032407
Transcript Infomation

pacid=37433268 locus=PGSC0003DMG400012447 ID=PGSC0003DMT400032407.v4.03 annot-version=v4.03
Sequence

ATGGGTTGTGTTTGTGGTAAGCCATCTGCCATTGAAGACAGTAGAGATAGTCCAAGGGAG
AGGCTGTCAAGTAAAAGTGCTGCAAGTTTGAGAGGGCCAAGAACTGGTGGTTCATCAAGA
AGAGAGGAAGCTTATAGAGTCAAAGATCGGTTGGATAGCATTGATGGGAAGGCAATGTTG
ATTGATAAACAAGTAAATGGTTCAGTAAGATTGCAGACTGAGAATCATGAGAGGAAAAGA
GAGAAGCAAGAGTTAATTGGGACATTACCTAAAAGCAGTGAAGGGGAACAGGTTGCTGCT
GGATGGCCACCCTGGCTTGCTGCTGTTGCTGGAGAAGCTATCAGAGGATGGGTGCCTAGA
CGAGCAGATTCCTTTGAGAAATTGGATAAAATTGGTCAGGGCACCTACAGCAACGTTTAC
CGTGCTCGTGATCTTGATCAAGGGAAGATCGTTGCATTGAAGAAAGTGAGATTTGATAAT
CTAGAACCTGAGAGTGTTCGGTTCATGGCTAGGGAGATTCACATATTACGGAGGCTTGAT
CATCCAAACATAATAAAACTAGAAGGTTTAGTTACTTCTAGGATGTCCTGCAGCCTGTAC
CTTGTATTTGAGTACATGGAGCATGATCTGGCAGGGCTAGCATCACATCCTGGTCTTAAG
TTTACTGAGTCACAGGTCAAATGTTACATGCAACAACTTTTACGGGGACTTGATCATTGT
CACAGTCGTGGTGTCTTACATCGTGATATAAAAGGCTCCAACCTTTTAATTGACAATAAT
GGTGTATTAAAGATTGCTGACTTTGGTCTAGCAAGCTTTTTTGATCCTCATCAAAGCCAG
CCTCTTACTAGCCGTGTAGTGACTCTCTGGTATCGGCCTCCTGAACTGCTACTTGGTGCT
ACTTACTATGGTACTGCTGTGGATTTATGGAGTGCTGGTTGCATACTAGCAGAACTTTAT
GCTGGAAAGCCTATAATGCCAGGAAGAACAGAGGTTGAGCAGCTTCATAAGATTTTCAAA
CTGTGTGGATCACCTTCTGAGGAATACTGGAGGAAATCGAGGTTGCCACATGCAACAATT
TTCAAGCCCCAACAACCTTATAGGCGCTGTGTTGCAGAAACATTTAAAGAGTTCCCTGCA
CCAGCTCTAGCACTCATAGAAACCTTACTCTCCATAGATCCTGTTGATCGTGGGTCCTCA
GCTTCTGCCTTGAAGAGTGAGTTCTTTACAACAAAGCCACTTCCTTGTGATCCTTCAAGC
TTGCCAAAATATCCTCCGAGCAAGGAATTTGATGCAAAAGTCCGGGATGAAGAAGCCCGA
AGGCAAGCGGCTGCTGGAGGTAAGGGTCATAGATATGACCCAGAAAGGAGAGGAACGAGA
GAATCGCGTGCAGTTCCTGCACCCGAAGCCAATGCTGAGCTAGTTTCCTCTATGCAGAAA
AGACAAGGTCAATCCAATCCAAAAAGCAGAAGTGAGATGTTCAACTCTCATCCAGAAGAA
GTTGCCTCTGGTTTTCCAATTGACCCCCCTAGACCATCTCAAGTCATGGAAGAAGCAAGT
AATGATCCTCAGGCGCAGCTCCATAAGCGAGGTTCCCATTCCGGGCCATTGTCTCACCGA
GCTGCTTGGGCAAAAGCTGGAAAGAATATGGATGATGCCCCAAAGCTATCTGTAGCGGAC
TTGTCATCTATGTCTGGGCTAGTCGCTGCAAGGAGAAGCATGTTCTCTGAAGATCGGTCA
GATAAGTCGGGCTCACACAAACAGGAGGTTCCTAAACTTATAGCCAGGTTTCCCGGATCC
TATAAAGAGGTTTCACATTCCACAATGAAACAAGAGCAGAAAAATCATGCACTTGCCAGC
TCACATCATCAAAATGAGGACGGTAGAACCAGCAACAATGATCCCGTTCTTTTGGGATAT
GGATCAAAAGGCAACAAAATCCACTACTCTGGACCACTACTAGTTCCATCAGGCAAAATG
GATCAAGTGTTGAAAGATCACGATCGCCACATCCAAGAAGCTGTAAGACGAGCACGCTTG
GACAAGGCAAAAGCAAAGAAAATTCAGGTTGAAGGAAACAAATTATCAGCCAATTCATTA
TTTGTTTCTGGCCGTTGA