Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032385
CDS Infomation

pacid=37434627 polypeptide=PGSC0003DMP400022000 locus=PGSC0003DMG400012437 ID=PGSC0003DMT400032385.v4.03 annot-version=v4.03
Sequence

ATGGGGGAAAGGAATACGCCCCACAGTAATCACTTCATGACTTTGGGAGCAGATCAGCGG
AGTCAAGCGTATATTTATCCAGAGCCTTGTATGACGTATGGGAGCTTTACAGCTTTTCCG
CATCCAAACGTTAACACCACCGTGCCAGCTCCAGGAAGCCTTGGTAATTTCTATGCGCCC
CATCTACCTGGCCATCAAGAGGGTGCTCTAATTTATGGGATGCCACCGTCCAATGGGATT
CAACAGTGGCATCATCTCACCAATGTTGGCGCAGCGTTTGCACCACCATCAAATTACTTT
TACCCTTATGTGGCAGCTCCAGCTGCATTGAGGACTTCTCCAGTTCCAGCAATTCATGGG
TTACGTGATAGGCTTCCAGTCTCAGGCACTCAGGGCAGCATCGGAAATAATGCAGATAAC
TTAGGTAGGAACGATCCTCGTATGGACAGTACCAGAGGGTCATCTAAGCAAAAGAATGTT
GCAGGCAACTCTGGAAATCTTCAGCGTCATTCTGCTCTGGCAGGGCCTAGTACTTCCGCT
GCTCCCGTCATCACAACAGCAAATGAATCTGATGTTTCTTCGAATGATTCTGTATCACGC
GAGCATGGAGGGAGTGACTCAGCACCACTCCTTGAAAATGGTACTACATCTGCAACTATG
GATTTGCCAGTTCCAGCAAATCATGGGTTACGTGATGGGCTTCCAGTCTCAGGCACTACA
GATGATTCTGTGTCAAGCGAGCATGGAGGGAGTGACTCAGCACCACTCCTTGAAAATGGT
ACTACATCTGCAACTATGGATTTGCCAGTTCCAGCAAATCATGGGTTACGTGATGGGCTT
CCAGTCTCAGGCACTACAGATGATTCTGTGTCAAGCGAGCATGGAGGGAGTGACTCAGCA
CCACTCCTTGAAAATGGTACTACATCTGCAACTATGGATTTGCCAGTTCCAGCAAATCAT
GGGTTACGTGATGGGCTTCCAGTCTCAGGCACTACAGATGATTCTGTGTCAAGCGAGCAT
GGAGGGAGTGACTCAGCACCACTCCTTGAAAATGGTACTACATCTGCAACTATGGATTTG
CCAGTTCCAGCAAATCATGGGTTACGTGATGGGCTTCCAGTCTCAGGCACTACAGATGAT
TCTGTGTCACGCGAGCATGGAGGGAGTGACTCAGCAGCACTACTTGAAAATGGTGCTGCA
TCTGCAACTATGGATTCGCCAGTTCTAGCAAATCATGGGTTACGTGATGGGCTTCCAGTC
TCAGGCACTACAGATGATTCTGTGTCACGCGAGCATGGAGGGAGTGACTCAGCAGCACTA
CTTGAAAATGGTGCTGCATCTGCAACTATGGATTCGCCAGTTCTAGCAAATCATGGGTTA
CGTGATGGGCTTCCAGTCTCAGGCACTACAGATGATTCTGTATCACGCGAGCATGGTAGG
AGTGACTCAGCACCACTCCTTGAAAATGGAGTACAGAGAAGTGGGAGCAGATTTGCTAGT
GGTCCAGATACTGTATTGCAAAATAACAATAATCATCTGCTTCAAGGAAACTATGTAGGC
CAAGCCTATCAGTTTCCTGGCAATTCTTGGCTGAACATGCCTTTCAATAGTAGCGGTAGT
GCAGCTCAATCTTGGGCCTGGAGACAGGCTGCTCCTTTAACCTATCCTCCCGCTGGTGCC
GGAGGCTATGTAATAGGTGCTGGAAACATGGCTATGCGAGGTTATCAAGTACCTTCCAGC
AACGGGGGTTTGACTGGTTTCATGTATCCACCCATTCCTCAAGGACCACCGCAGTACCAT
CATCATCTGTCACCTAATATGCAAACTATGGCAGGCCACACAATGAGCTCCTATCCTCAG
ATGACAGCATCTCCAGGCAGACAACTACAACTTAGTTCGTCCAATATGGGACCCTTGCTT
CCGTCTGGCTTTAGAATGTACAGACCTCATCAAAGGGAATTCATGATGCGTGGAACAAAT
GCTAGCCACCACAACCTCCGTAATGGAGTATCAATGCTGGGTGTTCCAAGATTTCGTGGA
GTGCATGTTGTTGATCAGCACAGAGATATGCGATTGGATGTGGATCGCATGACGTATGAG
GAGCTTCTTGCATTGGAGGAGCGAATTGGCAATGTGTCAATTGGTTTGTCCGAGGATATC
ATCGTTGCCAATTTGAAAACGAGAATATTTTTGTCTACCGAGACTCCTAGCCCTCTGGAA
AATGTTGCATCTGATCAAGACCAGAAAACTGTCTGTGTAATATGCCAGGCTGACTTCAAG
GATGGGGAGAAGATCGGCATTCTCAATTGTAGCCATGAGTACCACGAGGAATGCGTGAAG
AAATGGCTGGGTGTGAAGAACAGCTGCGCGATCTGCAAATCTGCAGCCTTGTCTACTGAG
AAGAAGGACAAGGAAGTGGTGACTACAGGAGGCGGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400022000
PEP Infomation

pacid=37434627 transcript=PGSC0003DMT400032385 locus=PGSC0003DMG400012437 ID=PGSC0003DMT400032385.v4.03 annot-version=v4.03
Sequence

MGERNTPHSNHFMTLGADQRSQAYIYPEPCMTYGSFTAFPHPNVNTTVPAPGSLGNFYAP
HLPGHQEGALIYGMPPSNGIQQWHHLTNVGAAFAPPSNYFYPYVAAPAALRTSPVPAIHG
LRDRLPVSGTQGSIGNNADNLGRNDPRMDSTRGSSKQKNVAGNSGNLQRHSALAGPSTSA
APVITTANESDVSSNDSVSREHGGSDSAPLLENGTTSATMDLPVPANHGLRDGLPVSGTT
DDSVSSEHGGSDSAPLLENGTTSATMDLPVPANHGLRDGLPVSGTTDDSVSSEHGGSDSA
PLLENGTTSATMDLPVPANHGLRDGLPVSGTTDDSVSSEHGGSDSAPLLENGTTSATMDL
PVPANHGLRDGLPVSGTTDDSVSREHGGSDSAALLENGAASATMDSPVLANHGLRDGLPV
SGTTDDSVSREHGGSDSAALLENGAASATMDSPVLANHGLRDGLPVSGTTDDSVSREHGR
SDSAPLLENGVQRSGSRFASGPDTVLQNNNNHLLQGNYVGQAYQFPGNSWLNMPFNSSGS
AAQSWAWRQAAPLTYPPAGAGGYVIGAGNMAMRGYQVPSSNGGLTGFMYPPIPQGPPQYH
HHLSPNMQTMAGHTMSSYPQMTASPGRQLQLSSSNMGPLLPSGFRMYRPHQREFMMRGTN
ASHHNLRNGVSMLGVPRFRGVHVVDQHRDMRLDVDRMTYEELLALEERIGNVSIGLSEDI
IVANLKTRIFLSTETPSPLENVASDQDQKTVCVICQADFKDGEKIGILNCSHEYHEECVK
KWLGVKNSCAICKSAALSTEKKDKEVVTTGGG*

Transcript Sequence

Transcript ID

PGSC0003DMT400032385
Transcript Infomation

pacid=37434627 locus=PGSC0003DMG400012437 ID=PGSC0003DMT400032385.v4.03 annot-version=v4.03
Sequence

ATGGGGGAAAGGAATACGCCCCACAGTAATCACTTCATGACTTTGGGAGCAGATCAGCGG
AGTCAAGCGTATATTTATCCAGAGCCTTGTATGACGTATGGGAGCTTTACAGCTTTTCCG
CATCCAAACGTTAACACCACCGTGCCAGCTCCAGGAAGCCTTGGTAATTTCTATGCGCCC
CATCTACCTGGCCATCAAGAGGGTGCTCTAATTTATGGGATGCCACCGTCCAATGGGATT
CAACAGTGGCATCATCTCACCAATGTTGGCGCAGCGTTTGCACCACCATCAAATTACTTT
TACCCTTATGTGGCAGCTCCAGCTGCATTGAGGACTTCTCCAGTTCCAGCAATTCATGGG
TTACGTGATAGGCTTCCAGTCTCAGGCACTCAGGGCAGCATCGGAAATAATGCAGATAAC
TTAGGTAGGAACGATCCTCGTATGGACAGTACCAGAGGGTCATCTAAGCAAAAGAATGTT
GCAGGCAACTCTGGAAATCTTCAGCGTCATTCTGCTCTGGCAGGGCCTAGTACTTCCGCT
GCTCCCGTCATCACAACAGCAAATGAATCTGATGTTTCTTCGAATGATTCTGTATCACGC
GAGCATGGAGGGAGTGACTCAGCACCACTCCTTGAAAATGGTACTACATCTGCAACTATG
GATTTGCCAGTTCCAGCAAATCATGGGTTACGTGATGGGCTTCCAGTCTCAGGCACTACA
GATGATTCTGTGTCAAGCGAGCATGGAGGGAGTGACTCAGCACCACTCCTTGAAAATGGT
ACTACATCTGCAACTATGGATTTGCCAGTTCCAGCAAATCATGGGTTACGTGATGGGCTT
CCAGTCTCAGGCACTACAGATGATTCTGTGTCAAGCGAGCATGGAGGGAGTGACTCAGCA
CCACTCCTTGAAAATGGTACTACATCTGCAACTATGGATTTGCCAGTTCCAGCAAATCAT
GGGTTACGTGATGGGCTTCCAGTCTCAGGCACTACAGATGATTCTGTGTCAAGCGAGCAT
GGAGGGAGTGACTCAGCACCACTCCTTGAAAATGGTACTACATCTGCAACTATGGATTTG
CCAGTTCCAGCAAATCATGGGTTACGTGATGGGCTTCCAGTCTCAGGCACTACAGATGAT
TCTGTGTCACGCGAGCATGGAGGGAGTGACTCAGCAGCACTACTTGAAAATGGTGCTGCA
TCTGCAACTATGGATTCGCCAGTTCTAGCAAATCATGGGTTACGTGATGGGCTTCCAGTC
TCAGGCACTACAGATGATTCTGTGTCACGCGAGCATGGAGGGAGTGACTCAGCAGCACTA
CTTGAAAATGGTGCTGCATCTGCAACTATGGATTCGCCAGTTCTAGCAAATCATGGGTTA
CGTGATGGGCTTCCAGTCTCAGGCACTACAGATGATTCTGTATCACGCGAGCATGGTAGG
AGTGACTCAGCACCACTCCTTGAAAATGGAGTACAGAGAAGTGGGAGCAGATTTGCTAGT
GGTCCAGATACTGTATTGCAAAATAACAATAATCATCTGCTTCAAGGAAACTATGTAGGC
CAAGCCTATCAGTTTCCTGGCAATTCTTGGCTGAACATGCCTTTCAATAGTAGCGGTAGT
GCAGCTCAATCTTGGGCCTGGAGACAGGCTGCTCCTTTAACCTATCCTCCCGCTGGTGCC
GGAGGCTATGTAATAGGTGCTGGAAACATGGCTATGCGAGGTTATCAAGTACCTTCCAGC
AACGGGGGTTTGACTGGTTTCATGTATCCACCCATTCCTCAAGGACCACCGCAGTACCAT
CATCATCTGTCACCTAATATGCAAACTATGGCAGGCCACACAATGAGCTCCTATCCTCAG
ATGACAGCATCTCCAGGCAGACAACTACAACTTAGTTCGTCCAATATGGGACCCTTGCTT
CCGTCTGGCTTTAGAATGTACAGACCTCATCAAAGGGAATTCATGATGCGTGGAACAAAT
GCTAGCCACCACAACCTCCGTAATGGAGTATCAATGCTGGGTGTTCCAAGATTTCGTGGA
GTGCATGTTGTTGATCAGCACAGAGATATGCGATTGGATGTGGATCGCATGACGTATGAG
GAGCTTCTTGCATTGGAGGAGCGAATTGGCAATGTGTCAATTGGTTTGTCCGAGGATATC
ATCGTTGCCAATTTGAAAACGAGAATATTTTTGTCTACCGAGACTCCTAGCCCTCTGGAA
AATGTTGCATCTGATCAAGACCAGAAAACTGTCTGTGTAATATGCCAGGCTGACTTCAAG
GATGGGGAGAAGATCGGCATTCTCAATTGTAGCCATGAGTACCACGAGGAATGCGTGAAG
AAATGGCTGGGTGTGAAGAACAGCTGCGCGATCTGCAAATCTGCAGCCTTGTCTACTGAG
AAGAAGGACAAGGAAGTGGTGACTACAGGAGGCGGCTAA