Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032373
CDS Infomation

pacid=37432619 polypeptide=PGSC0003DMP400021990 locus=PGSC0003DMG401012433 ID=PGSC0003DMT400032373.v4.03 annot-version=v4.03
Sequence

ATGGATTCAGATGCAAACGATTTGAATTCAAGAAATAGGTTGCGTTGGGGCGATAATTAC
AAAGTTTATACCCGGAAGCGCCGTAGAACCCTAGAGAATACTAGTACTGACGTTGTTCCG
GCCGCCACAGCCACCGTTAGCTCAGCCGCAGCTGCACCGGAGGTTTCGAACAGCGGGAGG
GATACGAACGAGAATGATGATGTGCCGGAGCCGTCTTTGCAAACCCAATTTCGGGATTGT
TCGACTCTTAAAGGGGGGACAGGGGGTGAGCAAGTAGCTGTGAGTAATGGTGGGGAAGTG
CGGGAATTGACGGAAGATTCATGTGGTAGAGATGAACCTAGAGATGGAGGTGTCGGACCA
CTGGTGGAGCATAGAGATGGGGAATCGGCTGAGGGTTCATGTGGTAGAGATGTACCTGAA
GTTGGCCGGGGCATTGACACTGGTGCAGCGGTGGTGGTGTCTAGTGGTGGAGAAGTCCCA
GAAGGCAGCAGCGGAAGTCAGCCAGCAATGCAGAATCATAGAAATGAACCACAAAGTGAC
AATCTTGAAATGGAGAATGGGTATGGTAAGCCGGTTATTTCAAGAATTAAAGATAGAATT
AGGATTAATTTAACTGGAGTGAGGTCCAGCGATGAGATTAGAGAGCTCGGTATGAGCCTA
GAGAGTGAGCTTGATCAAGTTAGGGGCTTGGTAAAGCAGCTTGAAGCTAAACAGCTTCAG
CTGACAACATATAGGACTAGTATAAATGGTGGTAATATTAATGCTGGTAGTGTTACTACT
TTCCCTGGTAGTATTACTACTGTCCCTGGTGGTTCTATTAGCTCTTACAGTCATCCACAG
TATATGGATGATGGTGTGATCAAGAATAGGTCTTTAGCGCGAATGAATTCAGAGGTGCGT
TCTGCTGGGCACATTGGATCAAGACCATTCCAGCGACCTAATTTTCTGATTGTGGAAAAC
AGCAATGGTTCTACTGACTTTGTGGAGAAGGAGAAGAGGACCCCAAAGGCTAATCAGTTT
TACAGGAATTCCGAGTTCCTCCTTGGTAAGGATAGACTGCCACCTGAAAGCAATAAAAGA
CTGAAGACTAATGGCTCTGGGAAGAAGCACAGTGCCAATTCAGAGAATGGGTTTGGGCTT
GATAAGCATAGACTTCAGGTTTTTAGGAATTGTAGCAGCTTGCTTCAGAGGTTAATGAAA
CACAAGCACGGTTGGGTGTTTAATGAGCCAGTGAACGTGAAATCACTTGGGCTACATGAT
TATCACGACATCATTAAGCATCCTATGGATTTGGGCACCATTAAGACTAGGTTATCTGAG
GATTGGTACAAGTCTCCAATGGAATTTGCGGAGGATGTACGACTTGTCTTTCGTAATGCC
ATGACTTATAATCCTAGAGGGCAAGATGTACATGTTATGGCTGAACAGTTATCAGAGATT
TTCGAAGAGAGATGGGCAGTTATAGAGGCTGAGTACAATTCAGATTGGAGGTACCAAACG
TATCATGATGTTGGTGCTCCCACTCCCACCTCAAGAATGACCTCTTATGCTCCTCCTTTT
CTCCACACCCCAGTGTCTTCTCGTTCTCTTGCTCCACATGCCCGTCAACTGCATCCTTTG
GATAGATCTGAGTCAATGACTAGGCCAGTTAATCCCAAGATGAAGACTTCAAATATAGCT
CATGTTACTAGGACACCAGTTCCTAAGAAACCGAAGGCAAAAGATCTCAATAAGAGAGAC
ATGACGTATGAGGAAAAGCAGAAGCTTAGCACTAATCTTCAGAATTTACCTTCAGAAAAG
CTTGATGCAATTGTTCAGATAATTAAGAAGAGGAACACTGCACTTAGTCAAGACAACGAT
GAGATTGAAGTAGATATAGATAGTGTTGATGCAGAAACACTCTGGGAGCTTGATAGATTT
GTAACAAATTTCAAAAAGAGTTTTAGCAAGTACAAGAGAAAAGCTGAACTTCTTCGAGCC
AGGGAAGGAGCTGCTCAGACTGCTCGAAATGTGAACCCTACATCAATGGTTGCTGATGCA
CTGAAAGAAAATGGAACTGGTGAAAAAGATACAACTCCTGCTACCCTTGAAGGTGGAAGA
CCAGCGGATAGTGCAAGTAGCAGCTCAAGTAGTTCCAGCAGTGATTCAGGCTCATCCTCT
AGTGATTCTGATAGTGATAGTTCTTCGGCATCTGGATCAGAGGCGGCGCAATCACCTAGA
ACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400021990
PEP Infomation

pacid=37432619 transcript=PGSC0003DMT400032373 locus=PGSC0003DMG401012433 ID=PGSC0003DMT400032373.v4.03 annot-version=v4.03
Sequence

MDSDANDLNSRNRLRWGDNYKVYTRKRRRTLENTSTDVVPAATATVSSAAAAPEVSNSGR
DTNENDDVPEPSLQTQFRDCSTLKGGTGGEQVAVSNGGEVRELTEDSCGRDEPRDGGVGP
LVEHRDGESAEGSCGRDVPEVGRGIDTGAAVVVSSGGEVPEGSSGSQPAMQNHRNEPQSD
NLEMENGYGKPVISRIKDRIRINLTGVRSSDEIRELGMSLESELDQVRGLVKQLEAKQLQ
LTTYRTSINGGNINAGSVTTFPGSITTVPGGSISSYSHPQYMDDGVIKNRSLARMNSEVR
SAGHIGSRPFQRPNFLIVENSNGSTDFVEKEKRTPKANQFYRNSEFLLGKDRLPPESNKR
LKTNGSGKKHSANSENGFGLDKHRLQVFRNCSSLLQRLMKHKHGWVFNEPVNVKSLGLHD
YHDIIKHPMDLGTIKTRLSEDWYKSPMEFAEDVRLVFRNAMTYNPRGQDVHVMAEQLSEI
FEERWAVIEAEYNSDWRYQTYHDVGAPTPTSRMTSYAPPFLHTPVSSRSLAPHARQLHPL
DRSESMTRPVNPKMKTSNIAHVTRTPVPKKPKAKDLNKRDMTYEEKQKLSTNLQNLPSEK
LDAIVQIIKKRNTALSQDNDEIEVDIDSVDAETLWELDRFVTNFKKSFSKYKRKAELLRA
REGAAQTARNVNPTSMVADALKENGTGEKDTTPATLEGGRPADSASSSSSSSSSDSGSSS
SDSDSDSSSASGSEAAQSPRT*

Transcript Sequence

Transcript ID

PGSC0003DMT400032373
Transcript Infomation

pacid=37432619 locus=PGSC0003DMG401012433 ID=PGSC0003DMT400032373.v4.03 annot-version=v4.03
Sequence

ATGGATTCAGATGCAAACGATTTGAATTCAAGAAATAGGTTGCGTTGGGGCGATAATTAC
AAAGTTTATACCCGGAAGCGCCGTAGAACCCTAGAGAATACTAGTACTGACGTTGTTCCG
GCCGCCACAGCCACCGTTAGCTCAGCCGCAGCTGCACCGGAGGTTTCGAACAGCGGGAGG
GATACGAACGAGAATGATGATGTGCCGGAGCCGTCTTTGCAAACCCAATTTCGGGATTGT
TCGACTCTTAAAGGGGGGACAGGGGGTGAGCAAGTAGCTGTGAGTAATGGTGGGGAAGTG
CGGGAATTGACGGAAGATTCATGTGGTAGAGATGAACCTAGAGATGGAGGTGTCGGACCA
CTGGTGGAGCATAGAGATGGGGAATCGGCTGAGGGTTCATGTGGTAGAGATGTACCTGAA
GTTGGCCGGGGCATTGACACTGGTGCAGCGGTGGTGGTGTCTAGTGGTGGAGAAGTCCCA
GAAGGCAGCAGCGGAAGTCAGCCAGCAATGCAGAATCATAGAAATGAACCACAAAGTGAC
AATCTTGAAATGGAGAATGGGTATGGTAAGCCGGTTATTTCAAGAATTAAAGATAGAATT
AGGATTAATTTAACTGGAGTGAGGTCCAGCGATGAGATTAGAGAGCTCGGTATGAGCCTA
GAGAGTGAGCTTGATCAAGTTAGGGGCTTGGTAAAGCAGCTTGAAGCTAAACAGCTTCAG
CTGACAACATATAGGACTAGTATAAATGGTGGTAATATTAATGCTGGTAGTGTTACTACT
TTCCCTGGTAGTATTACTACTGTCCCTGGTGGTTCTATTAGCTCTTACAGTCATCCACAG
TATATGGATGATGGTGTGATCAAGAATAGGTCTTTAGCGCGAATGAATTCAGAGGTGCGT
TCTGCTGGGCACATTGGATCAAGACCATTCCAGCGACCTAATTTTCTGATTGTGGAAAAC
AGCAATGGTTCTACTGACTTTGTGGAGAAGGAGAAGAGGACCCCAAAGGCTAATCAGTTT
TACAGGAATTCCGAGTTCCTCCTTGGTAAGGATAGACTGCCACCTGAAAGCAATAAAAGA
CTGAAGACTAATGGCTCTGGGAAGAAGCACAGTGCCAATTCAGAGAATGGGTTTGGGCTT
GATAAGCATAGACTTCAGGTTTTTAGGAATTGTAGCAGCTTGCTTCAGAGGTTAATGAAA
CACAAGCACGGTTGGGTGTTTAATGAGCCAGTGAACGTGAAATCACTTGGGCTACATGAT
TATCACGACATCATTAAGCATCCTATGGATTTGGGCACCATTAAGACTAGGTTATCTGAG
GATTGGTACAAGTCTCCAATGGAATTTGCGGAGGATGTACGACTTGTCTTTCGTAATGCC
ATGACTTATAATCCTAGAGGGCAAGATGTACATGTTATGGCTGAACAGTTATCAGAGATT
TTCGAAGAGAGATGGGCAGTTATAGAGGCTGAGTACAATTCAGATTGGAGGTACCAAACG
TATCATGATGTTGGTGCTCCCACTCCCACCTCAAGAATGACCTCTTATGCTCCTCCTTTT
CTCCACACCCCAGTGTCTTCTCGTTCTCTTGCTCCACATGCCCGTCAACTGCATCCTTTG
GATAGATCTGAGTCAATGACTAGGCCAGTTAATCCCAAGATGAAGACTTCAAATATAGCT
CATGTTACTAGGACACCAGTTCCTAAGAAACCGAAGGCAAAAGATCTCAATAAGAGAGAC
ATGACGTATGAGGAAAAGCAGAAGCTTAGCACTAATCTTCAGAATTTACCTTCAGAAAAG
CTTGATGCAATTGTTCAGATAATTAAGAAGAGGAACACTGCACTTAGTCAAGACAACGAT
GAGATTGAAGTAGATATAGATAGTGTTGATGCAGAAACACTCTGGGAGCTTGATAGATTT
GTAACAAATTTCAAAAAGAGTTTTAGCAAGTACAAGAGAAAAGCTGAACTTCTTCGAGCC
AGGGAAGGAGCTGCTCAGACTGCTCGAAATGTGAACCCTACATCAATGGTTGCTGATGCA
CTGAAAGAAAATGGAACTGGTGAAAAAGATACAACTCCTGCTACCCTTGAAGGTGGAAGA
CCAGCGGATAGTGCAAGTAGCAGCTCAAGTAGTTCCAGCAGTGATTCAGGCTCATCCTCT
AGTGATTCTGATAGTGATAGTTCTTCGGCATCTGGATCAGAGGCGGCGCAATCACCTAGA
ACATGA