Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032370
CDS Infomation

pacid=37433240 polypeptide=PGSC0003DMP400021989 locus=PGSC0003DMG400012432 ID=PGSC0003DMT400032370.v4.03 annot-version=v4.03
Sequence

ATGGAACTTCCGGTCACGACACCGGATTCTGGTGGCAAGAAGAAAGGTTCTTATACTATA
GAAACAAAAAATCTTTCCTATGCACTTCCTAGTTTATATGATGAGTTCAGTTGGATTTTT
TGTTGCAAGAATCCTAAGAGGCCTCAGAAGTTCATCATAAAGGATGTAAATTGTGAAGCA
AGGCCAGGAGAGATTACAGCTATTGCCGGTCCTAGTGGGGCTGGAAAAACAACACTGCTA
GAGATTCTTGCTGGGAAAATATCACCAACAAAAGTTACTGGAGAGGTACTAGTTAATGGT
CATCCTGTGAATGCCAAGTGTTTTCGGAGATTATCTGGTTATGTGACACAAGAAGATGCC
TTGTTTCCTCTGCTCACAGTTGAAGAAACACTCATGTATAGTGCTCTTCTGAGGCTACAA
GGTGGGAAAAAAGAGGCTGCAAATAGAGTTGGAGTGTTGATCAAGGAGCTTGGTTTGGAA
CAGGTTACTGGTGCAAGAGTTGGGGGAGGATCAAACAGGGGAATTTCGGGTGGTGAAAGG
CGTAGGGTGTCGATTGGAGTTGAGTTAGTACATGATCCTGCTGTGATTCTCATTGATGAG
CCAACTTCTGGGCTGGATTCAGCATCAGCACTTCATGTCATATCACTTCTTCAAGTGATG
GTAGCTCATCAAGGCAAGACAATTGTCTTGACTATCCATCAACCTGGTTTTCGGATTCTT
GAACTGTTTGATCGACTTGTTTTGCTCTCGAATGGGGGTGTACTTCACAATGGCTCGTTG
GAGTATCTCGAAGAGAGGATCAAGTTTTCCGGTCTACAGATTCCACCCCACATCAATGTG
CTTGAATTTGCTATTGATGTCACAGGCAGCATTGTCATTTATACTTCAGAAACTCCCAAT
GTCCATTTCCATATCAAGGATCATGGCGAAAAGAAGGAAAGTCTAAGGAAATATGATGAG
GGATTTACAGTTTCCAACCACAATGATATGGTAGATAAGTGTCCTTCCTACGCAAATTCC
TACGTTGAGGAGATTTCAATACTAGGAGGAAGATTTTGCAAGAACATATTCAGAACCAAG
CAACTTTTTGCAACCAGAATAATACAAGCATTGGTAGCAGGCTTTATACTGGGATCAATA
TTCATGAATGCTGACAACAATCTAGGGCAGGTTGCTTTACAAACAAGACTAGGATTCTTC
GCGTTCAGTCTAACATTCTTGCTGTCCACCATGACAGAAGGTTTACCCATTTTCTTACAA
GAGAGAACAATCTTTATGAGGGAGACTTCAAGAGGAGCATACAGAGTATCCTCTTATGTT
GTGGCAAACACAATTGTCTTTCTTCCATTCCTCTTAATGGTTGGGCTTCTCTACAGTGTC
CCGGTTTACTGGCTCGTTGGTCTGAGGGGAAGCATGGATGGGTTCCTCTACTTTGCTATG
GTGGTCTGGATAGTTCTCTTAATGTCAAATTCTTTCACTGCATGTTTCAGCGCACTTGTC
CCAACCTTCATCATGGGAACATCTATTATAGCTGGCTTGATGGGGTCTTTCTTCCTGTTC
TCAGGCTATTTCCTTTCAAAAGAGAAGATACCTAGTTACTGGATCTTCATGCACTACCTA
AGTCTGTTTAAGTACCCATTCGAGTGCTTCTTGATAAATGAGTATGGAGGCAAGGGAGGG
AAAAGATGTTTAGAAAGTGAAAGAGGAGAGTGCAAGTTGTTCGCGATTGACTTCTTGAAA
CAGCAAGACCTCAAAGAATCACTGAAATGGACCAACTTAGCAGTGATGCTGAGTTTCATC
TTGGGTTACAGAGTTCTCTGTTATCTAATTTTATGGTGCAGATGTTACAGAACCAGAAAC
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400021989
PEP Infomation

pacid=37433240 transcript=PGSC0003DMT400032370 locus=PGSC0003DMG400012432 ID=PGSC0003DMT400032370.v4.03 annot-version=v4.03
Sequence

MELPVTTPDSGGKKKGSYTIETKNLSYALPSLYDEFSWIFCCKNPKRPQKFIIKDVNCEA
RPGEITAIAGPSGAGKTTLLEILAGKISPTKVTGEVLVNGHPVNAKCFRRLSGYVTQEDA
LFPLLTVEETLMYSALLRLQGGKKEAANRVGVLIKELGLEQVTGARVGGGSNRGISGGER
RRVSIGVELVHDPAVILIDEPTSGLDSASALHVISLLQVMVAHQGKTIVLTIHQPGFRIL
ELFDRLVLLSNGGVLHNGSLEYLEERIKFSGLQIPPHINVLEFAIDVTGSIVIYTSETPN
VHFHIKDHGEKKESLRKYDEGFTVSNHNDMVDKCPSYANSYVEEISILGGRFCKNIFRTK
QLFATRIIQALVAGFILGSIFMNADNNLGQVALQTRLGFFAFSLTFLLSTMTEGLPIFLQ
ERTIFMRETSRGAYRVSSYVVANTIVFLPFLLMVGLLYSVPVYWLVGLRGSMDGFLYFAM
VVWIVLLMSNSFTACFSALVPTFIMGTSIIAGLMGSFFLFSGYFLSKEKIPSYWIFMHYL
SLFKYPFECFLINEYGGKGGKRCLESERGECKLFAIDFLKQQDLKESLKWTNLAVMLSFI
LGYRVLCYLILWCRCYRTRN*

Transcript Sequence

Transcript ID

PGSC0003DMT400032370
Transcript Infomation

pacid=37433240 locus=PGSC0003DMG400012432 ID=PGSC0003DMT400032370.v4.03 annot-version=v4.03
Sequence

ATGGAACTTCCGGTCACGACACCGGATTCTGGTGGCAAGAAGAAAGGTTCTTATACTATA
GAAACAAAAAATCTTTCCTATGCACTTCCTAGTTTATATGATGAGTTCAGTTGGATTTTT
TGTTGCAAGAATCCTAAGAGGCCTCAGAAGTTCATCATAAAGGATGTAAATTGTGAAGCA
AGGCCAGGAGAGATTACAGCTATTGCCGGTCCTAGTGGGGCTGGAAAAACAACACTGCTA
GAGATTCTTGCTGGGAAAATATCACCAACAAAAGTTACTGGAGAGGTACTAGTTAATGGT
CATCCTGTGAATGCCAAGTGTTTTCGGAGATTATCTGGTTATGTGACACAAGAAGATGCC
TTGTTTCCTCTGCTCACAGTTGAAGAAACACTCATGTATAGTGCTCTTCTGAGGCTACAA
GGTGGGAAAAAAGAGGCTGCAAATAGAGTTGGAGTGTTGATCAAGGAGCTTGGTTTGGAA
CAGGTTACTGGTGCAAGAGTTGGGGGAGGATCAAACAGGGGAATTTCGGGTGGTGAAAGG
CGTAGGGTGTCGATTGGAGTTGAGTTAGTACATGATCCTGCTGTGATTCTCATTGATGAG
CCAACTTCTGGGCTGGATTCAGCATCAGCACTTCATGTCATATCACTTCTTCAAGTGATG
GTAGCTCATCAAGGCAAGACAATTGTCTTGACTATCCATCAACCTGGTTTTCGGATTCTT
GAACTGTTTGATCGACTTGTTTTGCTCTCGAATGGGGGTGTACTTCACAATGGCTCGTTG
GAGTATCTCGAAGAGAGGATCAAGTTTTCCGGTCTACAGATTCCACCCCACATCAATGTG
CTTGAATTTGCTATTGATGTCACAGGCAGCATTGTCATTTATACTTCAGAAACTCCCAAT
GTCCATTTCCATATCAAGGATCATGGCGAAAAGAAGGAAAGTCTAAGGAAATATGATGAG
GGATTTACAGTTTCCAACCACAATGATATGGTAGATAAGTGTCCTTCCTACGCAAATTCC
TACGTTGAGGAGATTTCAATACTAGGAGGAAGATTTTGCAAGAACATATTCAGAACCAAG
CAACTTTTTGCAACCAGAATAATACAAGCATTGGTAGCAGGCTTTATACTGGGATCAATA
TTCATGAATGCTGACAACAATCTAGGGCAGGTTGCTTTACAAACAAGACTAGGATTCTTC
GCGTTCAGTCTAACATTCTTGCTGTCCACCATGACAGAAGGTTTACCCATTTTCTTACAA
GAGAGAACAATCTTTATGAGGGAGACTTCAAGAGGAGCATACAGAGTATCCTCTTATGTT
GTGGCAAACACAATTGTCTTTCTTCCATTCCTCTTAATGGTTGGGCTTCTCTACAGTGTC
CCGGTTTACTGGCTCGTTGGTCTGAGGGGAAGCATGGATGGGTTCCTCTACTTTGCTATG
GTGGTCTGGATAGTTCTCTTAATGTCAAATTCTTTCACTGCATGTTTCAGCGCACTTGTC
CCAACCTTCATCATGGGAACATCTATTATAGCTGGCTTGATGGGGTCTTTCTTCCTGTTC
TCAGGCTATTTCCTTTCAAAAGAGAAGATACCTAGTTACTGGATCTTCATGCACTACCTA
AGTCTGTTTAAGTACCCATTCGAGTGCTTCTTGATAAATGAGTATGGAGGCAAGGGAGGG
AAAAGATGTTTAGAAAGTGAAAGAGGAGAGTGCAAGTTGTTCGCGATTGACTTCTTGAAA
CAGCAAGACCTCAAAGAATCACTGAAATGGACCAACTTAGCAGTGATGCTGAGTTTCATC
TTGGGTTACAGAGTTCTCTGTTATCTAATTTTATGGTGCAGATGTTACAGAACCAGAAAC
TAG