Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032362
CDS Infomation

pacid=37432062 polypeptide=PGSC0003DMP400021982 locus=PGSC0003DMG400012429 ID=PGSC0003DMT400032362.v4.03 annot-version=v4.03
Sequence

ATGTCCGAATCTGGAAGACACATGTCGGAAATAGGACTTGATGGGGTAACTGATCGCTTG
AAGAACTCATTGACTTGCGTTGAAGATGGAAATGGAGTTGAAATTAACAAGCCCGATTTT
CGAGAACTCGATCTGGGTTCACCTGTTTCTCCATTACGGAATCGACCGCGTGGATTCACC
GCTACTACTACTACGACGACGACGACGACTACGACTACGACTACTACTACTAGTAGCAGT
TCTAATTCATCTGGATCTGGATCGGTATCGGGTCGGAATGGATCTCATTTGGGTCCGAAA
AAGTCCGAATCCAGTCACTCCGGTGAGCTTTCAGGTTCAGTTGAGAGCTCACCGAAGGCG
CGTGGATTTAAGCCAGGTCACGCGCGGTCTTATTCCAGTGGTGGCATTGCCGTTAATTCA
CCTCCGTTAAATGTGCTTCCCACCGGAAACATCTGCCCGTCCGGGAAGATTTTGAAAACC
GGCATGGCTAGTAAGTCATCGAAGACTGACGTTTTAGGTTCTGGAACGGGTTATTACGGT
CACGGAAGCATAATGCGTGGAGGTGCCGGTGTAAAATCTGGCGGCGGTGCTGTCGGTGGG
GCTGACGCCGGTGCTACCCAGACGGCGAATTTGAGAGGGGTAATGGCCGGAGACACAATG
AAAAGAGGAATGTTGAATTCTGATCCAGAGGAGTTGAAGAGATTAGGAAATGAGAATTAC
AGAAAGGGTTATTTTGTTGAAGCTTTAAATCTGTATGATAAAGCTATAGCTATTTCTCCA
GGGAATGCTGCTTACCATTGTAACCGGGCGGCAGCGTTGATCGGTCTGAAGCGGTTACCG
GAGGCGGTGAGGGAGTGTGAAGAAGCCATTAGGTTGGATCCATCATATGTAAGAGCACAC
CATCGATTGGGATCTTTGTTACTTAGTTTCGGGCAGGTTGAGAAAGCCAGAAGTCACATT
TGTTTCCAAGGGCATCAGCCAGATCAAGCTGAGTTGCAGAAGCTGCAAGCAGTGGAAAAA
TATATTGGCAAGTTCACTGACGCACGACGAGTTGGTGATTGGACAAGCATGTTAAGAGAA
GTCAATGCAGCCATTGCTTCTGGAGCAGATGCATCTCCTCAGCTATTTGCTTGTAGAGCG
GAAGCTCTTTTGAAGCTACATCAAGTAGAGGATGCAGAATTGAGCTTATCAATTACTCGG
AAGCATGAACCATCTGCTGGATCACCACAGTCAAAATTTTTTGGGATGCTTTCAGAGGCA
TATGTGTTCTTTGTTCAAGCTCAGATTGACCTGGCTATGGGAAGGTTTGAAAGTGCAATC
AGTGCAGTAGAGAGAGCTGGACATATTGATCCTCGAAATATTGAAGTATCAGTTTTTCTC
AACAATACGAGGTCGGTGGGACGGGCTCGTACCCGTGGCAATGATCTATTTAAATCCGAA
AGGTATACTGAAGCATGTGCTGCTTATGGGGAAGGTCTCAGGCGTGATTCTTCAAATTCA
GTTCTCTACTGTAATAGAGCAGCTTGCTGGTATAAACTCGGGCAGTGGGAAAAAGCTGTG
GATGACTGCAATCAAGCGCTCACTTTCCAGCCACACTACACTAAAGCCCTTCTTCGAAAG
GCTGCCTCAAATACCAAGCTTGAGAGATGGGTTGAAGCTGTCAGAGATTATGAGGTTTTG
AGAAAAGCGCTTCCATATGACAGTGAGGTTGCTGAATCGTTATTCCATGCTCAAGTTGCA
TTAAAGAGATCACGCGGAGAAGACATTCACAATATGAAATTTGGTGGGGAGGTGGAATTG
GTTTCTGGTCTCGAGCAGTTCCAAGCTGCGATTTCATCACCTTGTGCATCTGTGGTCCAT
TTTAAAGCAGCATCTAACCTACAATGCAAGCAGATATCCCCTTTCTTAGATACTTTAACC
ACCAAGTATCCTTCCATAAATTTTCTCAAGGTGGATGTGGAAGAGAGCCCGGCAATTGCT
AATGCAGAGAATGTTAGAATTGTACCAACATTTAAGATATACAAAAAGGGAAGCCGCGTG
AAGGAGATGATCTGCCCAAGTCAAGAGGTGTTAGAATCATCGGTGAGGCATTACAGTATT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400021982
PEP Infomation

pacid=37432062 transcript=PGSC0003DMT400032362 locus=PGSC0003DMG400012429 ID=PGSC0003DMT400032362.v4.03 annot-version=v4.03
Sequence

MSESGRHMSEIGLDGVTDRLKNSLTCVEDGNGVEINKPDFRELDLGSPVSPLRNRPRGFT
ATTTTTTTTTTTTTTTTSSSSNSSGSGSVSGRNGSHLGPKKSESSHSGELSGSVESSPKA
RGFKPGHARSYSSGGIAVNSPPLNVLPTGNICPSGKILKTGMASKSSKTDVLGSGTGYYG
HGSIMRGGAGVKSGGGAVGGADAGATQTANLRGVMAGDTMKRGMLNSDPEELKRLGNENY
RKGYFVEALNLYDKAIAISPGNAAYHCNRAAALIGLKRLPEAVRECEEAIRLDPSYVRAH
HRLGSLLLSFGQVEKARSHICFQGHQPDQAELQKLQAVEKYIGKFTDARRVGDWTSMLRE
VNAAIASGADASPQLFACRAEALLKLHQVEDAELSLSITRKHEPSAGSPQSKFFGMLSEA
YVFFVQAQIDLAMGRFESAISAVERAGHIDPRNIEVSVFLNNTRSVGRARTRGNDLFKSE
RYTEACAAYGEGLRRDSSNSVLYCNRAACWYKLGQWEKAVDDCNQALTFQPHYTKALLRK
AASNTKLERWVEAVRDYEVLRKALPYDSEVAESLFHAQVALKRSRGEDIHNMKFGGEVEL
VSGLEQFQAAISSPCASVVHFKAASNLQCKQISPFLDTLTTKYPSINFLKVDVEESPAIA
NAENVRIVPTFKIYKKGSRVKEMICPSQEVLESSVRHYSI*

Transcript Sequence

Transcript ID

PGSC0003DMT400032362
Transcript Infomation

pacid=37432062 locus=PGSC0003DMG400012429 ID=PGSC0003DMT400032362.v4.03 annot-version=v4.03
Sequence

ATGTCCGAATCTGGAAGACACATGTCGGAAATAGGACTTGATGGGGTAACTGATCGCTTG
AAGAACTCATTGACTTGCGTTGAAGATGGAAATGGAGTTGAAATTAACAAGCCCGATTTT
CGAGAACTCGATCTGGGTTCACCTGTTTCTCCATTACGGAATCGACCGCGTGGATTCACC
GCTACTACTACTACGACGACGACGACGACTACGACTACGACTACTACTACTAGTAGCAGT
TCTAATTCATCTGGATCTGGATCGGTATCGGGTCGGAATGGATCTCATTTGGGTCCGAAA
AAGTCCGAATCCAGTCACTCCGGTGAGCTTTCAGGTTCAGTTGAGAGCTCACCGAAGGCG
CGTGGATTTAAGCCAGGTCACGCGCGGTCTTATTCCAGTGGTGGCATTGCCGTTAATTCA
CCTCCGTTAAATGTGCTTCCCACCGGAAACATCTGCCCGTCCGGGAAGATTTTGAAAACC
GGCATGGCTAGTAAGTCATCGAAGACTGACGTTTTAGGTTCTGGAACGGGTTATTACGGT
CACGGAAGCATAATGCGTGGAGGTGCCGGTGTAAAATCTGGCGGCGGTGCTGTCGGTGGG
GCTGACGCCGGTGCTACCCAGACGGCGAATTTGAGAGGGGTAATGGCCGGAGACACAATG
AAAAGAGGAATGTTGAATTCTGATCCAGAGGAGTTGAAGAGATTAGGAAATGAGAATTAC
AGAAAGGGTTATTTTGTTGAAGCTTTAAATCTGTATGATAAAGCTATAGCTATTTCTCCA
GGGAATGCTGCTTACCATTGTAACCGGGCGGCAGCGTTGATCGGTCTGAAGCGGTTACCG
GAGGCGGTGAGGGAGTGTGAAGAAGCCATTAGGTTGGATCCATCATATGTAAGAGCACAC
CATCGATTGGGATCTTTGTTACTTAGTTTCGGGCAGGTTGAGAAAGCCAGAAGTCACATT
TGTTTCCAAGGGCATCAGCCAGATCAAGCTGAGTTGCAGAAGCTGCAAGCAGTGGAAAAA
TATATTGGCAAGTTCACTGACGCACGACGAGTTGGTGATTGGACAAGCATGTTAAGAGAA
GTCAATGCAGCCATTGCTTCTGGAGCAGATGCATCTCCTCAGCTATTTGCTTGTAGAGCG
GAAGCTCTTTTGAAGCTACATCAAGTAGAGGATGCAGAATTGAGCTTATCAATTACTCGG
AAGCATGAACCATCTGCTGGATCACCACAGTCAAAATTTTTTGGGATGCTTTCAGAGGCA
TATGTGTTCTTTGTTCAAGCTCAGATTGACCTGGCTATGGGAAGGTTTGAAAGTGCAATC
AGTGCAGTAGAGAGAGCTGGACATATTGATCCTCGAAATATTGAAGTATCAGTTTTTCTC
AACAATACGAGGTCGGTGGGACGGGCTCGTACCCGTGGCAATGATCTATTTAAATCCGAA
AGGTATACTGAAGCATGTGCTGCTTATGGGGAAGGTCTCAGGCGTGATTCTTCAAATTCA
GTTCTCTACTGTAATAGAGCAGCTTGCTGGTATAAACTCGGGCAGTGGGAAAAAGCTGTG
GATGACTGCAATCAAGCGCTCACTTTCCAGCCACACTACACTAAAGCCCTTCTTCGAAAG
GCTGCCTCAAATACCAAGCTTGAGAGATGGGTTGAAGCTGTCAGAGATTATGAGGTTTTG
AGAAAAGCGCTTCCATATGACAGTGAGGTTGCTGAATCGTTATTCCATGCTCAAGTTGCA
TTAAAGAGATCACGCGGAGAAGACATTCACAATATGAAATTTGGTGGGGAGGTGGAATTG
GTTTCTGGTCTCGAGCAGTTCCAAGCTGCGATTTCATCACCTTGTGCATCTGTGGTCCAT
TTTAAAGCAGCATCTAACCTACAATGCAAGCAGATATCCCCTTTCTTAGATACTTTAACC
ACCAAGTATCCTTCCATAAATTTTCTCAAGGTGGATGTGGAAGAGAGCCCGGCAATTGCT
AATGCAGAGAATGTTAGAATTGTACCAACATTTAAGATATACAAAAAGGGAAGCCGCGTG
AAGGAGATGATCTGCCCAAGTCAAGAGGTGTTAGAATCATCGGTGAGGCATTACAGTATT
TAA