Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032310
CDS Infomation

pacid=37433302 polypeptide=PGSC0003DMP400021947 locus=PGSC0003DMG400012410 ID=PGSC0003DMT400032310.v4.03 annot-version=v4.03
Sequence

ATGGCTCTACATAGACATGTTCCAATATTAGTCCTACTGCTGATTTTTTGGTCTAGCTCT
TTGAATGCTTATCAATTCGAACTTGGTGGCGTAGATGATTGGATTGCTAACCCTCTTGAA
TCGTTCGATCACTGGTCTCAACTAATGAGAATTCAAGTTAATGACACTCTTTTGTTTAAG
AATAAGAAAGGATCAGATCTGGTGTTGGAGGTAAATAAAGATGATTATGACAAGTGCAAT
ATAGAACATCCGATCAAGAAAATGGAAGATGAAAACTCTGTTTTTGAATTTGATCGTTCA
GGTAGTTTTTATTTTGTTAGTGGTAATAAGGATAAGTGTAAAGAAGGACAAAAGTTTGTT
ATTGTTGTTGCTGGTATGATGCTGCCTCCTTCAACTCCGGTACCATCACTTGCTCCTGTT
GGTTCTCACTTATCTCCGAAGGCACATGCACCAGAAAAGGCTCCAATTGGGGTGTCACCT
GGCCCTGTACCGGTGCATGTTCCTCGGGGTACTAGTTCAGACTCACCTCAAATAAGTCAT
TCACCAGGGGTGGCTCCAACGTTGGCCTCGCCTGGTTCTACTAGTTCTCACTTATCTCCA
GTATCTAGTGCACCCGAAGAGGATCCAATATTCGGGTTGTCACCTGCCCCTACAGATTCT
CACTCATCTAGTACGGGCCATGCACCTGGAAAGGCACCAACACCGGTGCATGTGCCTCGA
GGTATTATTTCCGATCCACCTCAAACAACACATGCACCAGGGATGGCTCCAACACTAGAG
TCGTCCCATGGGGTTCCAAGAGCTAGTACACATCACTCTCCCATAAAGGCTCCAACACCG
TCATCATCCCATGTGCCTTCCGGTTCCCATTTAGCTCCAACGGCTCTGTCACCAACATTA
GCTAATGTGCCTTCGAGTAGTGGTTCACACCTATCTCCTGAAACTCATGCACCAGGAAAC
GCTCCAAGTGGTGCGTCGCTTGCCCCTACTGGGTCCCACTTATCTCCAACAACACATGCA
CCCGAAAAGGCTCAAACACCTGCATTATCACATGTGTCTCCAAGTCCAAGTTCACACCTA
TCTCCAGCAGCTCATGCACCAGCAAAGACTCCAACCGGGGCATCACCTGTTCCTGCTGGT
TCTCACCAATCTCCAATAGTTCATGCTCCTGGTAAGGCACCAACACCGACATCATCAAAT
GTGGATCGAGCTCGTGCACCTGGAAAAGCTCCAACTGGGGTGTCACTTGTGCCCGCTGGT
TCCCACTCATCTCCAACTGCTCAAGCACCTGTCGAGGCGCCAACTCCAGTGTCGTATGTG
CCTCGAGGTACTGGTTTAACTCCTATGGCACATGCACCTGGAAAAGCTCCATCCGGGTCA
TCACATGCACCTGATGGTTCTCACTCATCTCCAAAAGCTCATGCACCTGTAAAAGCACCA
ACACCGATATCCAATGTTCCTCGAGGTACTAATTCACACCCACCTTCTACGGCTCATGCA
CCAGGAAAAGCTCCATCTGAGTCATCACATGCACCCGTAAAGGCTCCAACACCAGTATCA
TCAAATGTTCCTCGGGGTACTAGTTCACACCCACCTTCTACGGCTCATGCACCCAGTAAA
GCTCCATCTCAATCATCTCCAAAAGCTCATGCACCCGTAAAGGCTCCAACACCAAAATCA
TCAAATGTCCCTCGGGGTACTATTTCAAACCCACCTTTTTTTACCCGTGCACCTTCTGGT
TCTCACTCAACCCCAAAAGCCCATGCACCCATAAAAGCGGGGCCAACACCTGCACCCTCA
CATGTTCCTTCCAGTCCTCGCTCACACCTAAACCCGATTGCTAATGCACCCAAAACCGCA
CCAACGCCAACAACTTCGAAAATATCTCCAAATCCTAGCTCACGCCTATCTCCAACGGCT
CATGATGCACCCTCACCTACCGTTTCACCGACAACAGCGAAATCATCCAACGAATCTTCT
CCAATTTCATCTTCTCCGTCATCAAGTACGCCGCGATCGGGAACGAATTCTCCACCGGAA
AGTATTGCTCCGGCCACCGCCGGCGACAATATTCCGGCGGACATTGATTCACCAGCTAGT
TCACCACTCAGTTCTGAATCAGTAGCAGAGAAAGCATCAATTACTCCTTCTATATCAACA
GTGTCACTCTTTTTTACTCTAATTTTGGGATTAATAATTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400021947
PEP Infomation

pacid=37433302 transcript=PGSC0003DMT400032310 locus=PGSC0003DMG400012410 ID=PGSC0003DMT400032310.v4.03 annot-version=v4.03
Sequence

MALHRHVPILVLLLIFWSSSLNAYQFELGGVDDWIANPLESFDHWSQLMRIQVNDTLLFK
NKKGSDLVLEVNKDDYDKCNIEHPIKKMEDENSVFEFDRSGSFYFVSGNKDKCKEGQKFV
IVVAGMMLPPSTPVPSLAPVGSHLSPKAHAPEKAPIGVSPGPVPVHVPRGTSSDSPQISH
SPGVAPTLASPGSTSSHLSPVSSAPEEDPIFGLSPAPTDSHSSSTGHAPGKAPTPVHVPR
GIISDPPQTTHAPGMAPTLESSHGVPRASTHHSPIKAPTPSSSHVPSGSHLAPTALSPTL
ANVPSSSGSHLSPETHAPGNAPSGASLAPTGSHLSPTTHAPEKAQTPALSHVSPSPSSHL
SPAAHAPAKTPTGASPVPAGSHQSPIVHAPGKAPTPTSSNVDRARAPGKAPTGVSLVPAG
SHSSPTAQAPVEAPTPVSYVPRGTGLTPMAHAPGKAPSGSSHAPDGSHSSPKAHAPVKAP
TPISNVPRGTNSHPPSTAHAPGKAPSESSHAPVKAPTPVSSNVPRGTSSHPPSTAHAPSK
APSQSSPKAHAPVKAPTPKSSNVPRGTISNPPFFTRAPSGSHSTPKAHAPIKAGPTPAPS
HVPSSPRSHLNPIANAPKTAPTPTTSKISPNPSSRLSPTAHDAPSPTVSPTTAKSSNESS
PISSSPSSSTPRSGTNSPPESIAPATAGDNIPADIDSPASSPLSSESVAEKASITPSIST
VSLFFTLILGLII*

Transcript Sequence

Transcript ID

PGSC0003DMT400032310
Transcript Infomation

pacid=37433302 locus=PGSC0003DMG400012410 ID=PGSC0003DMT400032310.v4.03 annot-version=v4.03
Sequence

ATGGCTCTACATAGACATGTTCCAATATTAGTCCTACTGCTGATTTTTTGGTCTAGCTCT
TTGAATGCTTATCAATTCGAACTTGGTGGCGTAGATGATTGGATTGCTAACCCTCTTGAA
TCGTTCGATCACTGGTCTCAACTAATGAGAATTCAAGTTAATGACACTCTTTTGTTTAAG
AATAAGAAAGGATCAGATCTGGTGTTGGAGGTAAATAAAGATGATTATGACAAGTGCAAT
ATAGAACATCCGATCAAGAAAATGGAAGATGAAAACTCTGTTTTTGAATTTGATCGTTCA
GGTAGTTTTTATTTTGTTAGTGGTAATAAGGATAAGTGTAAAGAAGGACAAAAGTTTGTT
ATTGTTGTTGCTGGTATGATGCTGCCTCCTTCAACTCCGGTACCATCACTTGCTCCTGTT
GGTTCTCACTTATCTCCGAAGGCACATGCACCAGAAAAGGCTCCAATTGGGGTGTCACCT
GGCCCTGTACCGGTGCATGTTCCTCGGGGTACTAGTTCAGACTCACCTCAAATAAGTCAT
TCACCAGGGGTGGCTCCAACGTTGGCCTCGCCTGGTTCTACTAGTTCTCACTTATCTCCA
GTATCTAGTGCACCCGAAGAGGATCCAATATTCGGGTTGTCACCTGCCCCTACAGATTCT
CACTCATCTAGTACGGGCCATGCACCTGGAAAGGCACCAACACCGGTGCATGTGCCTCGA
GGTATTATTTCCGATCCACCTCAAACAACACATGCACCAGGGATGGCTCCAACACTAGAG
TCGTCCCATGGGGTTCCAAGAGCTAGTACACATCACTCTCCCATAAAGGCTCCAACACCG
TCATCATCCCATGTGCCTTCCGGTTCCCATTTAGCTCCAACGGCTCTGTCACCAACATTA
GCTAATGTGCCTTCGAGTAGTGGTTCACACCTATCTCCTGAAACTCATGCACCAGGAAAC
GCTCCAAGTGGTGCGTCGCTTGCCCCTACTGGGTCCCACTTATCTCCAACAACACATGCA
CCCGAAAAGGCTCAAACACCTGCATTATCACATGTGTCTCCAAGTCCAAGTTCACACCTA
TCTCCAGCAGCTCATGCACCAGCAAAGACTCCAACCGGGGCATCACCTGTTCCTGCTGGT
TCTCACCAATCTCCAATAGTTCATGCTCCTGGTAAGGCACCAACACCGACATCATCAAAT
GTGGATCGAGCTCGTGCACCTGGAAAAGCTCCAACTGGGGTGTCACTTGTGCCCGCTGGT
TCCCACTCATCTCCAACTGCTCAAGCACCTGTCGAGGCGCCAACTCCAGTGTCGTATGTG
CCTCGAGGTACTGGTTTAACTCCTATGGCACATGCACCTGGAAAAGCTCCATCCGGGTCA
TCACATGCACCTGATGGTTCTCACTCATCTCCAAAAGCTCATGCACCTGTAAAAGCACCA
ACACCGATATCCAATGTTCCTCGAGGTACTAATTCACACCCACCTTCTACGGCTCATGCA
CCAGGAAAAGCTCCATCTGAGTCATCACATGCACCCGTAAAGGCTCCAACACCAGTATCA
TCAAATGTTCCTCGGGGTACTAGTTCACACCCACCTTCTACGGCTCATGCACCCAGTAAA
GCTCCATCTCAATCATCTCCAAAAGCTCATGCACCCGTAAAGGCTCCAACACCAAAATCA
TCAAATGTCCCTCGGGGTACTATTTCAAACCCACCTTTTTTTACCCGTGCACCTTCTGGT
TCTCACTCAACCCCAAAAGCCCATGCACCCATAAAAGCGGGGCCAACACCTGCACCCTCA
CATGTTCCTTCCAGTCCTCGCTCACACCTAAACCCGATTGCTAATGCACCCAAAACCGCA
CCAACGCCAACAACTTCGAAAATATCTCCAAATCCTAGCTCACGCCTATCTCCAACGGCT
CATGATGCACCCTCACCTACCGTTTCACCGACAACAGCGAAATCATCCAACGAATCTTCT
CCAATTTCATCTTCTCCGTCATCAAGTACGCCGCGATCGGGAACGAATTCTCCACCGGAA
AGTATTGCTCCGGCCACCGCCGGCGACAATATTCCGGCGGACATTGATTCACCAGCTAGT
TCACCACTCAGTTCTGAATCAGTAGCAGAGAAAGCATCAATTACTCCTTCTATATCAACA
GTGTCACTCTTTTTTACTCTAATTTTGGGATTAATAATTTAA