Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032299
CDS Infomation

pacid=37433212 polypeptide=PGSC0003DMP400021936 locus=PGSC0003DMG403012406 ID=PGSC0003DMT400032299.v4.03 annot-version=v4.03
Sequence

ATGGGAGAACGCAAGTCTTCATCTAAGAAAAAATCTTCCAAAAAGAAGAGACTCAAAATT
TCCTCTAAGATACGGAAGAGAAAAAGCAGAAGAAACAAATCCAAGAAGTTATCCAGTTCT
GAGGATGACTCGTCATCTTCTGCTTCCTCTGATTATTCTAGCAGTCCACAGTCTTTGTCC
TCCGATTCAGAGGTTGATTATAGTAGGAAAAGACGTAGGCACTCACGTGACATGAAACGC
GTGAAGAAAAGAACCCAGAGAAGATCCTCAAGCCGAGATGTCAGTGAGGGTTCACCCCCT
GTAAAGAAAAGAAAAAGGTCAAATAGAAAGAGTCTTGATTATGGGAGAAAAGTGCAGAAG
AAAAAGCGAAAGAGACACGCTAGTATTAGCTCCACTAACAGTGACTCAAGAAGTTGTTCT
AGTTGCCGACGTGAAAATAGTGTTAGCTCCAGAGGTAGAGATTCTAAAAGCTTTTCCACT
TGCCATGATGAAACTAATAGTGGTAATGAGAACACCAATCTTCAGATTCCCAGGATTAAG
TCTAGAAAAAAGATGAAAGAAAAGAAAATTCATAATGAGCCAAGCACTGGCAGAAGGAGC
GGAAGTAGGGGACCAGTTTGTTCTTTATGTAACCATCATTCATGTTCTTGTAATACTACT
CATAATGGGGAGGAATATGTGGAAGAGAGTATTCCTAAGCGCTTAAGATCTGTTGTTACT
ATTCCAGAAAAGACACGTGAGGAAGAGGGTGACGAGCAGGGACCAGATATGCTTAAAGAA
GAGATTTTGAATAAGCACCATGATTGTCCTTCATGCAGAAACCATGACAATAATGACCTG
GAAATTAAAGGGAAATTAGCTTCTTGTTCTTGTTTCCCGTCCATTCAAACAATGCAGGAT
GGAAATTTGATAATTGATGAAACTTTTGGCCCCACAAAAGTTGATGGTGGTCTGGATCCT
AAACCCAATAAAGTCAAAGAAGCAAGTCATGATAATGGAGGTGAGAGTGGGAATTCTGAT
AATATTGCTAATACAGGAATTGAGGATCTTGAGACTGTCTTACGGAAAAAGGCGTTGGAG
AATTTGCAGAAGTTTCGTAAAGAGTTTCAAACAAATTTAAAATCTGGTGCCAAGGAAACA
AAGAATGGCAGTGATGTTAATCACTTATCCCCTTTGAAGACTGAGGTTGTACCATACAAG
TCTCTGGAGCGGGGGGGAAAAGATGGATTGGCTTTAAATCAAGCTGTAAAATGTAGAAGC
AAGCTTGTAACTACTAAGGAATTTTCTCATTCCACAGAGATTGAGATAAATACTCCAGTT
GAAAAGAATAATGGAAAAGGATCTGGTTGCGTTGAGCCGGGTGTTACACAACCTGCTGAT
AGATCAGCACTCTCAGAGAGTCCAGAACAGGAGAACCATACCACTGAACCAGTTCTTAGC
AATGAACCTGAACCTGGTAAACTATTATGTAGTACCACAGTACAGACATATAAAAAGGAA
AATCCATTGGCTTCCAAGAGAAACATAATTAAAACACCAGTTCCCTTGAGACCTGGAGTT
CATAGCACTGGGACCAGCGATAACTTAGACATGGGAGCTGTTAATGCCGGTATCCGTCCT
ACTGTAGAAACTACTTCTAGTGTCAGATCCACATCTGATGGACTTACTTCAAAACACCAG
CCAGATGAAACCAAGGATGCCTCTGAATTTGAACAAAAGACCATGTCTGTAATGAGGGGT
GGTGAGACGGTACAGGTATTATATTCGTATTTCATTATTTATGCATGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400021936
PEP Infomation

pacid=37433212 transcript=PGSC0003DMT400032299 locus=PGSC0003DMG403012406 ID=PGSC0003DMT400032299.v4.03 annot-version=v4.03
Sequence

MGERKSSSKKKSSKKKRLKISSKIRKRKSRRNKSKKLSSSEDDSSSSASSDYSSSPQSLS
SDSEVDYSRKRRRHSRDMKRVKKRTQRRSSSRDVSEGSPPVKKRKRSNRKSLDYGRKVQK
KKRKRHASISSTNSDSRSCSSCRRENSVSSRGRDSKSFSTCHDETNSGNENTNLQIPRIK
SRKKMKEKKIHNEPSTGRRSGSRGPVCSLCNHHSCSCNTTHNGEEYVEESIPKRLRSVVT
IPEKTREEEGDEQGPDMLKEEILNKHHDCPSCRNHDNNDLEIKGKLASCSCFPSIQTMQD
GNLIIDETFGPTKVDGGLDPKPNKVKEASHDNGGESGNSDNIANTGIEDLETVLRKKALE
NLQKFRKEFQTNLKSGAKETKNGSDVNHLSPLKTEVVPYKSLERGGKDGLALNQAVKCRS
KLVTTKEFSHSTEIEINTPVEKNNGKGSGCVEPGVTQPADRSALSESPEQENHTTEPVLS
NEPEPGKLLCSTTVQTYKKENPLASKRNIIKTPVPLRPGVHSTGTSDNLDMGAVNAGIRP
TVETTSSVRSTSDGLTSKHQPDETKDASEFEQKTMSVMRGGETVQVLYSYFIIYAC*

Transcript Sequence

Transcript ID

PGSC0003DMT400032299
Transcript Infomation

pacid=37433212 locus=PGSC0003DMG403012406 ID=PGSC0003DMT400032299.v4.03 annot-version=v4.03
Sequence

ATGGGAGAACGCAAGTCTTCATCTAAGAAAAAATCTTCCAAAAAGAAGAGACTCAAAATT
TCCTCTAAGATACGGAAGAGAAAAAGCAGAAGAAACAAATCCAAGAAGTTATCCAGTTCT
GAGGATGACTCGTCATCTTCTGCTTCCTCTGATTATTCTAGCAGTCCACAGTCTTTGTCC
TCCGATTCAGAGGTTGATTATAGTAGGAAAAGACGTAGGCACTCACGTGACATGAAACGC
GTGAAGAAAAGAACCCAGAGAAGATCCTCAAGCCGAGATGTCAGTGAGGGTTCACCCCCT
GTAAAGAAAAGAAAAAGGTCAAATAGAAAGAGTCTTGATTATGGGAGAAAAGTGCAGAAG
AAAAAGCGAAAGAGACACGCTAGTATTAGCTCCACTAACAGTGACTCAAGAAGTTGTTCT
AGTTGCCGACGTGAAAATAGTGTTAGCTCCAGAGGTAGAGATTCTAAAAGCTTTTCCACT
TGCCATGATGAAACTAATAGTGGTAATGAGAACACCAATCTTCAGATTCCCAGGATTAAG
TCTAGAAAAAAGATGAAAGAAAAGAAAATTCATAATGAGCCAAGCACTGGCAGAAGGAGC
GGAAGTAGGGGACCAGTTTGTTCTTTATGTAACCATCATTCATGTTCTTGTAATACTACT
CATAATGGGGAGGAATATGTGGAAGAGAGTATTCCTAAGCGCTTAAGATCTGTTGTTACT
ATTCCAGAAAAGACACGTGAGGAAGAGGGTGACGAGCAGGGACCAGATATGCTTAAAGAA
GAGATTTTGAATAAGCACCATGATTGTCCTTCATGCAGAAACCATGACAATAATGACCTG
GAAATTAAAGGGAAATTAGCTTCTTGTTCTTGTTTCCCGTCCATTCAAACAATGCAGGAT
GGAAATTTGATAATTGATGAAACTTTTGGCCCCACAAAAGTTGATGGTGGTCTGGATCCT
AAACCCAATAAAGTCAAAGAAGCAAGTCATGATAATGGAGGTGAGAGTGGGAATTCTGAT
AATATTGCTAATACAGGAATTGAGGATCTTGAGACTGTCTTACGGAAAAAGGCGTTGGAG
AATTTGCAGAAGTTTCGTAAAGAGTTTCAAACAAATTTAAAATCTGGTGCCAAGGAAACA
AAGAATGGCAGTGATGTTAATCACTTATCCCCTTTGAAGACTGAGGTTGTACCATACAAG
TCTCTGGAGCGGGGGGGAAAAGATGGATTGGCTTTAAATCAAGCTGTAAAATGTAGAAGC
AAGCTTGTAACTACTAAGGAATTTTCTCATTCCACAGAGATTGAGATAAATACTCCAGTT
GAAAAGAATAATGGAAAAGGATCTGGTTGCGTTGAGCCGGGTGTTACACAACCTGCTGAT
AGATCAGCACTCTCAGAGAGTCCAGAACAGGAGAACCATACCACTGAACCAGTTCTTAGC
AATGAACCTGAACCTGGTAAACTATTATGTAGTACCACAGTACAGACATATAAAAAGGAA
AATCCATTGGCTTCCAAGAGAAACATAATTAAAACACCAGTTCCCTTGAGACCTGGAGTT
CATAGCACTGGGACCAGCGATAACTTAGACATGGGAGCTGTTAATGCCGGTATCCGTCCT
ACTGTAGAAACTACTTCTAGTGTCAGATCCACATCTGATGGACTTACTTCAAAACACCAG
CCAGATGAAACCAAGGATGCCTCTGAATTTGAACAAAAGACCATGTCTGTAATGAGGGGT
GGTGAGACGGTACAGGTATTATATTCGTATTTCATTATTTATGCATGTTAG