Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032265
CDS Infomation

pacid=37433954 polypeptide=PGSC0003DMP400021914 locus=PGSC0003DMG400012394 ID=PGSC0003DMT400032265.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAAGCAGAAGCAAAAGTTGGGTTGGGAACATTTACCACAAGTTTGAGGCTGTG
TGTCAGGAGGTCGATGAATTTGTAACTAAGGACACAGTTAAGTATGTTGAGAATCAGGTG
CAAACTGTTGGTGCAAACATGAAAAAGTTTTACTCTGGTGTGGTGCCAGATTTTCTTATC
CCAGTGGATAGTAATGTAAAAAAAGAAGCACAAGCTGTCAATGAGAAGCCAAAGCACGCC
GTTGGCACTCATACTAGTTCAGTGGCCAACACTACGCAGAACCCTATCCAAGAGAAATCA
TGTCAGAATCAGAATTCCCTTGAAAGTCATGCTGCTTCAACTTCAACTGAACTTGATGGT
GTGGTAGCTTCTGAAGAAGCAGAAATTGATGTTTCTGTAGGAAATGAATGTGCCACTGCG
ATTTGTAAGAACTCATGTAAGTTTTTTAAAGAGAATATAACAAGGGAGGAAGCACTGGTA
GTTGACGAACCAAGTACTTCAGAAGACAGAGTTTCATCTGAATCCTGTTCTGACAAAGAT
TCAAAAGATACCATGTGCTATAGCTTTTCAGATGATGATAAGTGTTTTTCTGATGTATCG
AGCTCTCAGAGTATACTACAAGATGATATGGTCGGGGAGGAACAACCACTGGCTAAGGGA
TCAAGTTCATTTTTGGATATTTTGTCTTTATCACAACTCACGGCATCTATGAATGAAAAA
ATGTTTGATAGTTCTCCTGATGCTATCAACTGTATTTCTAATGTACCAAGTAGTCAAATG
GTTTTGCTACGGAACATCACTAGGGAGGTGGAACCAGTCGCTGATCAATCAAATTCTTTT
GGAGAGATGGCTCTATCAAAGTCATTACCATTTTCAATGGGGGAAAGTCGAGGAAATTCC
ACCATGACTAAGTTACGGCATCCAACTTCAAATTATGATACAGAACTTAGGACCTTGCCA
GAGGATGAAAGCATTTCCAATGCTTCAATAACTCCGACGAACTTGCAAGACAATATAACC
AGTGAGGATCAACTTGCATCCAAGGAATCAAGTTCTGTCGAAGATAAAACTTTGCCACAA
ACCCCAGCATTTGCATCTGTTATACCTCCTTCACAAAATGATGCAGGATTTGGGGTGTCC
ACTACCGTGAATAAGAGTTTTTTGGGTGATGTTACTTTTGGGTTTGAAGAGTCTAGTACG
ACCTTGGCATTAAAAGATGCTCCAAGCACACTTCAGTCATCTGAACTTGTACTTTCTCGA
GTTATGGAGAACAAAAGCATGGATATTGACTCTGGAATATCAAACTGTTCTCTGTTAAAA
GAATCTTCAAGCCTGTCAACTTCCTCAATTGGAAACTGTATGCAGGAAGCAGAGTCTGAT
TTAAGTATCTCCACTGGCCACTCATCTGCCTTGTCTACTTCCTTAGCGAGCGCAAACAAT
GTTGTTTCTGTCATTCCAGCTCTCTCAAGTACTCCGTTGACAGATTTCAGTGGTAAGTGG
ATTCCTCTTTCAACCCTCTGGTCTAGTAGTAAACGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400021914
PEP Infomation

pacid=37433954 transcript=PGSC0003DMT400032265 locus=PGSC0003DMG400012394 ID=PGSC0003DMT400032265.v4.03 annot-version=v4.03
Sequence

MEKSRSKSWVGNIYHKFEAVCQEVDEFVTKDTVKYVENQVQTVGANMKKFYSGVVPDFLI
PVDSNVKKEAQAVNEKPKHAVGTHTSSVANTTQNPIQEKSCQNQNSLESHAASTSTELDG
VVASEEAEIDVSVGNECATAICKNSCKFFKENITREEALVVDEPSTSEDRVSSESCSDKD
SKDTMCYSFSDDDKCFSDVSSSQSILQDDMVGEEQPLAKGSSSFLDILSLSQLTASMNEK
MFDSSPDAINCISNVPSSQMVLLRNITREVEPVADQSNSFGEMALSKSLPFSMGESRGNS
TMTKLRHPTSNYDTELRTLPEDESISNASITPTNLQDNITSEDQLASKESSSVEDKTLPQ
TPAFASVIPPSQNDAGFGVSTTVNKSFLGDVTFGFEESSTTLALKDAPSTLQSSELVLSR
VMENKSMDIDSGISNCSLLKESSSLSTSSIGNCMQEAESDLSISTGHSSALSTSLASANN
VVSVIPALSSTPLTDFSGKWIPLSTLWSSSKR*

Transcript Sequence

Transcript ID

PGSC0003DMT400032265
Transcript Infomation

pacid=37433954 locus=PGSC0003DMG400012394 ID=PGSC0003DMT400032265.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAAGCAGAAGCAAAAGTTGGGTTGGGAACATTTACCACAAGTTTGAGGCTGTG
TGTCAGGAGGTCGATGAATTTGTAACTAAGGACACAGTTAAGTATGTTGAGAATCAGGTG
CAAACTGTTGGTGCAAACATGAAAAAGTTTTACTCTGGTGTGGTGCCAGATTTTCTTATC
CCAGTGGATAGTAATGTAAAAAAAGAAGCACAAGCTGTCAATGAGAAGCCAAAGCACGCC
GTTGGCACTCATACTAGTTCAGTGGCCAACACTACGCAGAACCCTATCCAAGAGAAATCA
TGTCAGAATCAGAATTCCCTTGAAAGTCATGCTGCTTCAACTTCAACTGAACTTGATGGT
GTGGTAGCTTCTGAAGAAGCAGAAATTGATGTTTCTGTAGGAAATGAATGTGCCACTGCG
ATTTGTAAGAACTCATGTAAGTTTTTTAAAGAGAATATAACAAGGGAGGAAGCACTGGTA
GTTGACGAACCAAGTACTTCAGAAGACAGAGTTTCATCTGAATCCTGTTCTGACAAAGAT
TCAAAAGATACCATGTGCTATAGCTTTTCAGATGATGATAAGTGTTTTTCTGATGTATCG
AGCTCTCAGAGTATACTACAAGATGATATGGTCGGGGAGGAACAACCACTGGCTAAGGGA
TCAAGTTCATTTTTGGATATTTTGTCTTTATCACAACTCACGGCATCTATGAATGAAAAA
ATGTTTGATAGTTCTCCTGATGCTATCAACTGTATTTCTAATGTACCAAGTAGTCAAATG
GTTTTGCTACGGAACATCACTAGGGAGGTGGAACCAGTCGCTGATCAATCAAATTCTTTT
GGAGAGATGGCTCTATCAAAGTCATTACCATTTTCAATGGGGGAAAGTCGAGGAAATTCC
ACCATGACTAAGTTACGGCATCCAACTTCAAATTATGATACAGAACTTAGGACCTTGCCA
GAGGATGAAAGCATTTCCAATGCTTCAATAACTCCGACGAACTTGCAAGACAATATAACC
AGTGAGGATCAACTTGCATCCAAGGAATCAAGTTCTGTCGAAGATAAAACTTTGCCACAA
ACCCCAGCATTTGCATCTGTTATACCTCCTTCACAAAATGATGCAGGATTTGGGGTGTCC
ACTACCGTGAATAAGAGTTTTTTGGGTGATGTTACTTTTGGGTTTGAAGAGTCTAGTACG
ACCTTGGCATTAAAAGATGCTCCAAGCACACTTCAGTCATCTGAACTTGTACTTTCTCGA
GTTATGGAGAACAAAAGCATGGATATTGACTCTGGAATATCAAACTGTTCTCTGTTAAAA
GAATCTTCAAGCCTGTCAACTTCCTCAATTGGAAACTGTATGCAGGAAGCAGAGTCTGAT
TTAAGTATCTCCACTGGCCACTCATCTGCCTTGTCTACTTCCTTAGCGAGCGCAAACAAT
GTTGTTTCTGTCATTCCAGCTCTCTCAAGTACTCCGTTGACAGATTTCAGTGGTAAGTGG
ATTCCTCTTTCAACCCTCTGGTCTAGTAGTAAACGATAA