Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032246
CDS Infomation

pacid=37433057 polypeptide=PGSC0003DMP400021900 locus=PGSC0003DMG400012388 ID=PGSC0003DMT400032246.v4.03 annot-version=v4.03
Sequence

ATGGCGACGAGGCAGAGACGAGCTTTGACGTCGGATCCTCCGGAGACGGCGTCATCTCCG
GCGTATACAAAGGTAGATAAGCCGGAGAGATCGGACGGTGAAAATGAAGGCGTCGATAGA
GGACTAGGTTGGCTTCTGCCGTTGCTTTGCCTAGGGATGTTGAGGCATATGAGCGCTACG
TCAAATATTATTCACGATTGTGACGAGGTGTTCAATTACTGGGAGCCTCTTCACTACTTG
CTCTACAAGTCTGGTTTCCAAACTTGGGAATACAGTTCGCAGTTTGCCTTGCGGTCGTAT
CTGTATATTCTGCTTCACAAACTGGTGGGTTGGCCTGCTGCTTGGTGGTTTGGAGAGGAA
AAGGTGAGAGTATTTTATGCTGTGAGAATTTTTCTTGCAGGGCTGTCTGTCATCTGTGAT
GCCGCTCTAGTTGTAGCCCTTTCCCGAAAATATGGAAAACGTCTTGCATCATATGCACTC
GCAATGCTATGCTTAGCAAGTGGTTGTTTCTTTGCTAGCACGAGTTTCCTTCCGAGTTCA
TTCTCAATGTATGCCATGTCTCTTTCTTCAGCACTATTTCTATTTAATAAGCCTGCCATG
GCAGTTTCTGTTGCTGCCACTGGAGTGATTCTGGGCTGGCCGTTTTCGATCCTTGCTTTT
CTTCCACTGACAATTTACTCACTGGTTAAAAGCTTCAAACCTGTGTTTCTTACAGGTGTT
GTCACTTCTATCGTCCTTATGGTACTCTCAGTTCTTGTTGACTACGACTACTATAAGAAG
TGGACATCCTCTGTTATCAACTTGCTGGTTTACAATGTTTTAGGGGGTGGTGAAAGTCAT
CTCTATGGTACTGAAGGGGCATCATTTTATTTGAGGAATGGTTTTAACAATTTCAACCTC
TGTTTTGTGTTTGCTCTACTGTTCTTAGCTATACTACCCATTGCTAAGAAGAAGTATGCT
CCTGAGTTGCTCGTTGTTGTTTCACCTGTCTATCTCTGGATTGCCTTTATGTCCTTACAG
CCACACAAAGAAGAAAGATTTCTGTACCCAATATATCCACTTATCTGTGTTGCTGCTTCC
GCTGTGATTGAAAGTTTTCCTGATCTGTTCAGGGATAAGTACAATCCCAATGGTTCATCC
ACTCTAGTTAAGATAGCGAAGATTCTCAGACCTCTAGCTCTTGGTTTGATTCTTTGTGTC
TCCCACGCTCGGACATTTTCACTTATTAATGGTTATTCAGCTCCTATTGAGATTTACAAG
CATTTGGACTACCATGATGATGCTGGACCAGGTTCTGTCCTTTGCGTTGGTAGTGAGTGG
CACCGGTTCCCTTCTTCCTTCTTCATTCCTGATTATGTGGGCCAAGTTCGATGGTTGGAT
GATGGATTCACGGGCCTTCTCCCAATTCCGTTCAATTCTAGCTTGGGTGGTACCTCGGCA
GCACCATCTTACTTCAATAATAAGAACAAGGCATCAGAGAGGCAATATCTTAAGGATCCT
GAGCAATGCACTTTGCTGATAGAGCTGCAACTTCAACGTCCTTATCCTACGCGAGGGAGT
GACATGACCACATGGGAGATTGTTGCAGCACTTCCATATCTGGACAGGGAACTATCTCCT
CCATTGTATCGGTCATTCTTTATTCCAAATCAATGGCAGCAGAAGAATGTCTTTGGCCAA
TACAGATTACTTAGGAGAATACAAAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400021900
PEP Infomation

pacid=37433057 transcript=PGSC0003DMT400032246 locus=PGSC0003DMG400012388 ID=PGSC0003DMT400032246.v4.03 annot-version=v4.03
Sequence

MATRQRRALTSDPPETASSPAYTKVDKPERSDGENEGVDRGLGWLLPLLCLGMLRHMSAT
SNIIHDCDEVFNYWEPLHYLLYKSGFQTWEYSSQFALRSYLYILLHKLVGWPAAWWFGEE
KVRVFYAVRIFLAGLSVICDAALVVALSRKYGKRLASYALAMLCLASGCFFASTSFLPSS
FSMYAMSLSSALFLFNKPAMAVSVAATGVILGWPFSILAFLPLTIYSLVKSFKPVFLTGV
VTSIVLMVLSVLVDYDYYKKWTSSVINLLVYNVLGGGESHLYGTEGASFYLRNGFNNFNL
CFVFALLFLAILPIAKKKYAPELLVVVSPVYLWIAFMSLQPHKEERFLYPIYPLICVAAS
AVIESFPDLFRDKYNPNGSSTLVKIAKILRPLALGLILCVSHARTFSLINGYSAPIEIYK
HLDYHDDAGPGSVLCVGSEWHRFPSSFFIPDYVGQVRWLDDGFTGLLPIPFNSSLGGTSA
APSYFNNKNKASERQYLKDPEQCTLLIELQLQRPYPTRGSDMTTWEIVAALPYLDRELSP
PLYRSFFIPNQWQQKNVFGQYRLLRRIQK*

Transcript Sequence

Transcript ID

PGSC0003DMT400032246
Transcript Infomation

pacid=37433057 locus=PGSC0003DMG400012388 ID=PGSC0003DMT400032246.v4.03 annot-version=v4.03
Sequence

ATGGCGACGAGGCAGAGACGAGCTTTGACGTCGGATCCTCCGGAGACGGCGTCATCTCCG
GCGTATACAAAGGTAGATAAGCCGGAGAGATCGGACGGTGAAAATGAAGGCGTCGATAGA
GGACTAGGTTGGCTTCTGCCGTTGCTTTGCCTAGGGATGTTGAGGCATATGAGCGCTACG
TCAAATATTATTCACGATTGTGACGAGGTGTTCAATTACTGGGAGCCTCTTCACTACTTG
CTCTACAAGTCTGGTTTCCAAACTTGGGAATACAGTTCGCAGTTTGCCTTGCGGTCGTAT
CTGTATATTCTGCTTCACAAACTGGTGGGTTGGCCTGCTGCTTGGTGGTTTGGAGAGGAA
AAGGTGAGAGTATTTTATGCTGTGAGAATTTTTCTTGCAGGGCTGTCTGTCATCTGTGAT
GCCGCTCTAGTTGTAGCCCTTTCCCGAAAATATGGAAAACGTCTTGCATCATATGCACTC
GCAATGCTATGCTTAGCAAGTGGTTGTTTCTTTGCTAGCACGAGTTTCCTTCCGAGTTCA
TTCTCAATGTATGCCATGTCTCTTTCTTCAGCACTATTTCTATTTAATAAGCCTGCCATG
GCAGTTTCTGTTGCTGCCACTGGAGTGATTCTGGGCTGGCCGTTTTCGATCCTTGCTTTT
CTTCCACTGACAATTTACTCACTGGTTAAAAGCTTCAAACCTGTGTTTCTTACAGGTGTT
GTCACTTCTATCGTCCTTATGGTACTCTCAGTTCTTGTTGACTACGACTACTATAAGAAG
TGGACATCCTCTGTTATCAACTTGCTGGTTTACAATGTTTTAGGGGGTGGTGAAAGTCAT
CTCTATGGTACTGAAGGGGCATCATTTTATTTGAGGAATGGTTTTAACAATTTCAACCTC
TGTTTTGTGTTTGCTCTACTGTTCTTAGCTATACTACCCATTGCTAAGAAGAAGTATGCT
CCTGAGTTGCTCGTTGTTGTTTCACCTGTCTATCTCTGGATTGCCTTTATGTCCTTACAG
CCACACAAAGAAGAAAGATTTCTGTACCCAATATATCCACTTATCTGTGTTGCTGCTTCC
GCTGTGATTGAAAGTTTTCCTGATCTGTTCAGGGATAAGTACAATCCCAATGGTTCATCC
ACTCTAGTTAAGATAGCGAAGATTCTCAGACCTCTAGCTCTTGGTTTGATTCTTTGTGTC
TCCCACGCTCGGACATTTTCACTTATTAATGGTTATTCAGCTCCTATTGAGATTTACAAG
CATTTGGACTACCATGATGATGCTGGACCAGGTTCTGTCCTTTGCGTTGGTAGTGAGTGG
CACCGGTTCCCTTCTTCCTTCTTCATTCCTGATTATGTGGGCCAAGTTCGATGGTTGGAT
GATGGATTCACGGGCCTTCTCCCAATTCCGTTCAATTCTAGCTTGGGTGGTACCTCGGCA
GCACCATCTTACTTCAATAATAAGAACAAGGCATCAGAGAGGCAATATCTTAAGGATCCT
GAGCAATGCACTTTGCTGATAGAGCTGCAACTTCAACGTCCTTATCCTACGCGAGGGAGT
GACATGACCACATGGGAGATTGTTGCAGCACTTCCATATCTGGACAGGGAACTATCTCCT
CCATTGTATCGGTCATTCTTTATTCCAAATCAATGGCAGCAGAAGAATGTCTTTGGCCAA
TACAGATTACTTAGGAGAATACAAAAGTGA