Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032245
CDS Infomation

pacid=37431658 polypeptide=PGSC0003DMP400021899 locus=PGSC0003DMG400012387 ID=PGSC0003DMT400032245.v4.03 annot-version=v4.03
Sequence

ATGGCTACTCGTAATTTGGAGAAATTGGCATCTATAGATGCACAGTTGAGGCTTTTGGTA
CCTACTAAGGTGTCTGAAGATGATAAGCTTGTTGAGTATGATGCTTTGCTTTTGGACCGT
TTTCTTGATATTCTTGAGGATTTGCATGGAGAGGGTATCAAAGAAACAGTCCAAGAATGT
TATGAGCTTTCTGCTGAGTATGAAAACACGCGTGATAAGAAGAAGCTGGAGGAGCTTGGC
AGTGTGTTGACAAGTTTGGATCCAGGGGATTCAATTGTTGTTGCTAAATCTATTTCTCAC
ATGCTTAACATGGCCAACTTGGCTGAGGAGGTTCAGATTGCCAATAGTGGGAGGGAAAAG
TCGAAAAAGGGCGACTTTTCAGATGAGAGCAACTTGATGACTGAATCCGACATTGAAGAA
ACACTCAAGAGACTTGTAGTGGACTTGAAGAAGTCTCCTCGAGAAGTTTTTGAAGCTCTG
AAGAATCAGACAGTGGATTTGGTCTTTACTGCTCATCCGACTCAAGCTACCCGGAGATCT
TTGCTTCAGAAGCATGCAAGGATCCGCAATTGCTTGGCTCAGTTGTATGCTAAAGACATT
ACACCCGACGATAAAGAGGAGCTGGATGAAGCTTTACAGAGGGAGATTCAAGCTGCTTTC
CGCACTGATGAAATCAGAAGGACTCCTCCAACACCACAAGATGAAATGAGAGCTGGAATG
AGTTACTTCCATGAAACAATTTGGAACGGTGTTCTGAGGTTTCTACGACGTGTAGACACA
GCTCTTAAAAACATTGGGATTAATGAACGAATTCCTTATAATGCTCCTCTCATCCAGTTC
TCATCTTGGATGGGTGGCGACCGTGATGGTAATCCAAGAGTCACTCCTGAGGTCACTAGA
GATGTTTGCTTATTGGCTCGAATGATGGCAGCGAATTTGTACTATTCTCAGATAGATGAT
CTAATGTTTGAGTTATCTATGTGGCGTTGCAATGACGAGCTTCGTGATCGGGCAGATGAA
CAACACCGTTCATTAAAGAGAGACGAAAAACACTACATAGAATTCTGGAAACAAGTTCCA
CCAAGTGAACCGTATCGTGTAATTATTGGTGATGTGAGAGATAAACTATATCATACACGT
GAGCGTACTCGCCAGCTGTTATCCAATGGGTTCTCTGAAATTCCTGAGGAGGCAACATAT
ACTAACATCGAGCAGTTCTTGGAACCTCTTGAGCTCTGCTACAGATCTCTTTGTGCTTGT
GGGGATCGACCAATTGCTGACGGAAGCCTTCTGGATTTTCTACGACAAGTTTCCACCTTT
GGACTCTCACTTGTGAGACTTGACATAAGACAAGAGTCGGATCGCCACACTGATGTCCTT
GATGCCATTACCCAGCACTTGGAAATTGGTTCATATCGAGAGTGGTCTGAGGAATGTAGA
CAAGAGTGGCTTCTCTCTGAACTCAGCGGCAAGCGACCTCTATTTGGACCTGATCTACCA
AAAACTGAAGAAATTGCTGATGTTTTGAATACATTCCATGTCATATCAGAACTTCCATCA
GACTGCTTTGGGGCATACATCATCTCAATGGCCACTGCACCATCTGATGTGCTTGCTGTT
GAGCTTTTACAGCGTGAATGCCACGTGAAGCAACCTTTACGGGTAGTTCCACTTTTTGAG
AAATTGGATGATCTGGAGGCTGCTCCTGCTGCTATTGCACGTCTCTTTTCTATTGAGTGG
TACAAAAACCGCATTAATGGGAAGCAAGAAGTCATGATTGGCTACTCAGACTCTGGAAAG
GATGCTGGTAGGCTGTCGGCAGCATGGCAGCTATATAAGGCTCAAGAGGAGCTTATAAAA
GTTTCCAAACAATATGGCGTGAAGCTAATTATGTTCCATGGCAGAGGTGGTACAGTTGGA
AGAGGAGGTGGTCCCAGCCATCTTGCTATATTATCTCAGCCACCTGATACAATTCAGGGA
TCTCTTCGTGTAACAGTTCAAGGTGAGGTTATTGAGCAATCATTTGGGGAGGAACACTTG
TGTTTTAGGACACTCCAGCGTTTCACTTCTGCCACCCTAGAACATGGAATGTATCCACCT
TTCCCCCCAAAGCCAGAATGGCGTGCACTTCTGGATGAAATTTCTGTCATTGCTACAGAG
AAGTATAGGTCAATAGTATTCAAGGAACCCCGATTTGTCGAGTACTTCCGCCTGGCAACA
CCCGAGCTGGAGTATGGTCGGATGAACATTGGTAGCCGTCCATCAAAGCGTAAACCAAGT
GGAGGCATAGAAACACTTAGAGCTATTCCATGGATCTTTGCATGGACCCAGACTAGGTTT
CATCTGCCAGTCTGGCTTGGCTTTGGGGCAGCATTTAAGTATGCACTTAACAAGGATAAA
AAAAACCTCAATATGCTGCAGGACATGCACAAAAAATGGCCATTCTTTAGAGTTACTGCT
GATTTGATTGAGATGGTGTTTGCCAAGGGAGACCCCGGCATTGCTGCTTTGTACGACAAG
CTTCTGGTTTCTGAAGATTTGTGGTCCTTCGGTGAGCTTTTGAGGTCCGATTATGAGGAG
ACTAAGAGCCTCCTGCTTCAGGTTGCTGGACACAAGGAACTTCTAGAGGGAGACCCCTGC
TTAAAACAACGACTCAGGCTGCGTGATTCCTATATCACTACTTTAAATGTATGCCAAGCT
TACACACTAAAGAGGATTCGTGATCCAACCTACAACGTCACTCTAAGGCCTCACATTACC
AAGGAATACATAGAATCGAAACCTGCTGCTGAACTCGTGAGCCTGAATCCAGAAAGCGAG
TATGCTCCCGGCTTGGAAGACACACTCATCTTGACCATGAAAGGTATTGCTGCTGGAATG
CAGAATACTGGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400021899
PEP Infomation

pacid=37431658 transcript=PGSC0003DMT400032245 locus=PGSC0003DMG400012387 ID=PGSC0003DMT400032245.v4.03 annot-version=v4.03
Sequence

MATRNLEKLASIDAQLRLLVPTKVSEDDKLVEYDALLLDRFLDILEDLHGEGIKETVQEC
YELSAEYENTRDKKKLEELGSVLTSLDPGDSIVVAKSISHMLNMANLAEEVQIANSGREK
SKKGDFSDESNLMTESDIEETLKRLVVDLKKSPREVFEALKNQTVDLVFTAHPTQATRRS
LLQKHARIRNCLAQLYAKDITPDDKEELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGM
SYFHETIWNGVLRFLRRVDTALKNIGINERIPYNAPLIQFSSWMGGDRDGNPRVTPEVTR
DVCLLARMMAANLYYSQIDDLMFELSMWRCNDELRDRADEQHRSLKRDEKHYIEFWKQVP
PSEPYRVIIGDVRDKLYHTRERTRQLLSNGFSEIPEEATYTNIEQFLEPLELCYRSLCAC
GDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVLDAITQHLEIGSYREWSEECR
QEWLLSELSGKRPLFGPDLPKTEEIADVLNTFHVISELPSDCFGAYIISMATAPSDVLAV
ELLQRECHVKQPLRVVPLFEKLDDLEAAPAAIARLFSIEWYKNRINGKQEVMIGYSDSGK
DAGRLSAAWQLYKAQEELIKVSKQYGVKLIMFHGRGGTVGRGGGPSHLAILSQPPDTIQG
SLRVTVQGEVIEQSFGEEHLCFRTLQRFTSATLEHGMYPPFPPKPEWRALLDEISVIATE
KYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIETLRAIPWIFAWTQTRF
HLPVWLGFGAAFKYALNKDKKNLNMLQDMHKKWPFFRVTADLIEMVFAKGDPGIAALYDK
LLVSEDLWSFGELLRSDYEETKSLLLQVAGHKELLEGDPCLKQRLRLRDSYITTLNVCQA
YTLKRIRDPTYNVTLRPHITKEYIESKPAAELVSLNPESEYAPGLEDTLILTMKGIAAGM
QNTG*

Transcript Sequence

Transcript ID

PGSC0003DMT400032245
Transcript Infomation

pacid=37431658 locus=PGSC0003DMG400012387 ID=PGSC0003DMT400032245.v4.03 annot-version=v4.03
Sequence

ATGGCTACTCGTAATTTGGAGAAATTGGCATCTATAGATGCACAGTTGAGGCTTTTGGTA
CCTACTAAGGTGTCTGAAGATGATAAGCTTGTTGAGTATGATGCTTTGCTTTTGGACCGT
TTTCTTGATATTCTTGAGGATTTGCATGGAGAGGGTATCAAAGAAACAGTCCAAGAATGT
TATGAGCTTTCTGCTGAGTATGAAAACACGCGTGATAAGAAGAAGCTGGAGGAGCTTGGC
AGTGTGTTGACAAGTTTGGATCCAGGGGATTCAATTGTTGTTGCTAAATCTATTTCTCAC
ATGCTTAACATGGCCAACTTGGCTGAGGAGGTTCAGATTGCCAATAGTGGGAGGGAAAAG
TCGAAAAAGGGCGACTTTTCAGATGAGAGCAACTTGATGACTGAATCCGACATTGAAGAA
ACACTCAAGAGACTTGTAGTGGACTTGAAGAAGTCTCCTCGAGAAGTTTTTGAAGCTCTG
AAGAATCAGACAGTGGATTTGGTCTTTACTGCTCATCCGACTCAAGCTACCCGGAGATCT
TTGCTTCAGAAGCATGCAAGGATCCGCAATTGCTTGGCTCAGTTGTATGCTAAAGACATT
ACACCCGACGATAAAGAGGAGCTGGATGAAGCTTTACAGAGGGAGATTCAAGCTGCTTTC
CGCACTGATGAAATCAGAAGGACTCCTCCAACACCACAAGATGAAATGAGAGCTGGAATG
AGTTACTTCCATGAAACAATTTGGAACGGTGTTCTGAGGTTTCTACGACGTGTAGACACA
GCTCTTAAAAACATTGGGATTAATGAACGAATTCCTTATAATGCTCCTCTCATCCAGTTC
TCATCTTGGATGGGTGGCGACCGTGATGGTAATCCAAGAGTCACTCCTGAGGTCACTAGA
GATGTTTGCTTATTGGCTCGAATGATGGCAGCGAATTTGTACTATTCTCAGATAGATGAT
CTAATGTTTGAGTTATCTATGTGGCGTTGCAATGACGAGCTTCGTGATCGGGCAGATGAA
CAACACCGTTCATTAAAGAGAGACGAAAAACACTACATAGAATTCTGGAAACAAGTTCCA
CCAAGTGAACCGTATCGTGTAATTATTGGTGATGTGAGAGATAAACTATATCATACACGT
GAGCGTACTCGCCAGCTGTTATCCAATGGGTTCTCTGAAATTCCTGAGGAGGCAACATAT
ACTAACATCGAGCAGTTCTTGGAACCTCTTGAGCTCTGCTACAGATCTCTTTGTGCTTGT
GGGGATCGACCAATTGCTGACGGAAGCCTTCTGGATTTTCTACGACAAGTTTCCACCTTT
GGACTCTCACTTGTGAGACTTGACATAAGACAAGAGTCGGATCGCCACACTGATGTCCTT
GATGCCATTACCCAGCACTTGGAAATTGGTTCATATCGAGAGTGGTCTGAGGAATGTAGA
CAAGAGTGGCTTCTCTCTGAACTCAGCGGCAAGCGACCTCTATTTGGACCTGATCTACCA
AAAACTGAAGAAATTGCTGATGTTTTGAATACATTCCATGTCATATCAGAACTTCCATCA
GACTGCTTTGGGGCATACATCATCTCAATGGCCACTGCACCATCTGATGTGCTTGCTGTT
GAGCTTTTACAGCGTGAATGCCACGTGAAGCAACCTTTACGGGTAGTTCCACTTTTTGAG
AAATTGGATGATCTGGAGGCTGCTCCTGCTGCTATTGCACGTCTCTTTTCTATTGAGTGG
TACAAAAACCGCATTAATGGGAAGCAAGAAGTCATGATTGGCTACTCAGACTCTGGAAAG
GATGCTGGTAGGCTGTCGGCAGCATGGCAGCTATATAAGGCTCAAGAGGAGCTTATAAAA
GTTTCCAAACAATATGGCGTGAAGCTAATTATGTTCCATGGCAGAGGTGGTACAGTTGGA
AGAGGAGGTGGTCCCAGCCATCTTGCTATATTATCTCAGCCACCTGATACAATTCAGGGA
TCTCTTCGTGTAACAGTTCAAGGTGAGGTTATTGAGCAATCATTTGGGGAGGAACACTTG
TGTTTTAGGACACTCCAGCGTTTCACTTCTGCCACCCTAGAACATGGAATGTATCCACCT
TTCCCCCCAAAGCCAGAATGGCGTGCACTTCTGGATGAAATTTCTGTCATTGCTACAGAG
AAGTATAGGTCAATAGTATTCAAGGAACCCCGATTTGTCGAGTACTTCCGCCTGGCAACA
CCCGAGCTGGAGTATGGTCGGATGAACATTGGTAGCCGTCCATCAAAGCGTAAACCAAGT
GGAGGCATAGAAACACTTAGAGCTATTCCATGGATCTTTGCATGGACCCAGACTAGGTTT
CATCTGCCAGTCTGGCTTGGCTTTGGGGCAGCATTTAAGTATGCACTTAACAAGGATAAA
AAAAACCTCAATATGCTGCAGGACATGCACAAAAAATGGCCATTCTTTAGAGTTACTGCT
GATTTGATTGAGATGGTGTTTGCCAAGGGAGACCCCGGCATTGCTGCTTTGTACGACAAG
CTTCTGGTTTCTGAAGATTTGTGGTCCTTCGGTGAGCTTTTGAGGTCCGATTATGAGGAG
ACTAAGAGCCTCCTGCTTCAGGTTGCTGGACACAAGGAACTTCTAGAGGGAGACCCCTGC
TTAAAACAACGACTCAGGCTGCGTGATTCCTATATCACTACTTTAAATGTATGCCAAGCT
TACACACTAAAGAGGATTCGTGATCCAACCTACAACGTCACTCTAAGGCCTCACATTACC
AAGGAATACATAGAATCGAAACCTGCTGCTGAACTCGTGAGCCTGAATCCAGAAAGCGAG
TATGCTCCCGGCTTGGAAGACACACTCATCTTGACCATGAAAGGTATTGCTGCTGGAATG
CAGAATACTGGTTAA