Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032221
CDS Infomation

pacid=37463584 polypeptide=PGSC0003DMP400021888 locus=PGSC0003DMG400012380 ID=PGSC0003DMT400032221.v4.03 annot-version=v4.03
Sequence

ATGGGAGACTCTGTTCCTGTTCCTGTATTGGAAGGAGAAGAAAAATTGATTGCTGCTGCA
CACCAGATTGTTAAAGCATTGCACAATAAGAAGGATTTTTTAACACATGATGCAAGAAAA
ATCCTGGCTGATTTAGGCTCTCAATTAATGTCCTCTATAACCAAACTAGACACTTTACAA
CAATCCAATTCCAAATCCCTTGAGGATCAGCTTAACATATTGCAAAATAAGATCATGAGC
TGGGAGGAGTTAGAAGATCATCAATCAGTTATATGGAATTGTGGCCAAGAATATGTACAT
GATTATTTGACATCTGTTGATCAACTTCTAAAATTCACTCAACAGTTAGAGAGTAATAAT
TTGGGGGTGGATAAACCACTTGATGACCTTCTCATCTCTAGGGCTCACCAACTTGTTCGA
ACAGCAATGAATCGGCTTCAGCAGGAGTTTAAGCACTTGCTTGTTCAGAATAAGCAGCCT
TTCCAGCCAGAGCATATGTCTTTTCGTTCAAACGAAGATGATGACACTTCAATTGCTTCA
TTCGGAGATGATTCACTAGAAGATGTGCTTCAAAGGGATAGCATGAGTAGACGTTCCGAG
GAATATATATCTGTTGTTGAACTTGTGCATCCTGATGTCATTCCTGACTTAAGGTGTATC
GCAAATTTGATGTTCAATTCAAATTATAGTACAGACTGCTCTCAAGCATTTGTTAATGTA
AGGAGAGATGCATTGGATGATTTCTTATTCATTCTTGAAGCGGATAAGTTGTGTATTGAC
GATGTGCTTAAGATGGAATGGAACTCATTGAACTCAAAAATCAGGAGGTGGATACGTTGT
ATGAACATCTTTGTGCGCGTTTATCTTGCAAGCGAGAAATGGTTAAGTGATCAAATATTT
GGTGAACTAGATCATTCAGTGAGTTCAGTATGCTTCGTTGAGTCTTCAAAAGGTTCAATA
TTGCATCTTTTGAAGTTTGCTGAATCAGTAGCTATTGGATCTCATCAACCAGAGAAGTTG
ATTCGGATTCTTGACATGTACGAGGTTCTTTCAGATCTCATGCCAGATATCGATGTTATG
TTCTCTGATGATGCTGGATTATGTGTTAGGACAGAGTGCCAACACATCCTTACAAGTTTG
GCTGGTTGTGCAAGGACAACTTTTCTTGAATTTGAACATGCTGTTGCTTCTAGCGTATCA
GCAAATCCTTTTCGTGGTGGTGGAATACACCACCTCACGAGGTACGTTATGAACTACATG
AAAACTTTAACGGATTATAGCAAGATCCTCAATGAGCTACTGAAGGGCGATGAAGAGGAG
GAAGATTCACCACAAGACATGACACCGGATAGAGAAGAAGAAGAAGAAGATAACAGTAAC
GGATCAAGTTGTTACATTTCTCCGTTGGCTCAATATTTTAGATCATTCACTTCAATTTTG
GAATGCAACCTTGATGACAAGTCGAAGTTATATAAGGATGAATCATTAGGTCACCTTTTC
TTGATGAATAATATTCACTACATGGCTGAAAAGGTGAAGAATTCTCATGATCTAAGAACA
ATACTAGGCGATGATTGGATTCGCAAACATAATTGGAGATTCCAACAACATGCAATGAAC
TATGAGAGAGCTACTTGGAGTTCCATCCTCTCGTTACTTAGGGAAGAAGGGGTTCATAAT
CCAGGATCAAATTCTATTTCAAGAACTCTGCTGAAAGAGAGACTGCAATGCTTTTACGCC
GCATTTGATGAAGTTTACAAGAGCCAAACAGGTTGGTTGATTCAAGATTCCCAACTTCGT
GATGATCTACGTATCTCAACGTCTCTCAAGGTTATCCAAGCATATAGGACTTTTATTGGA
AGGCACAGTAATCATATTAGTGATAAATATATTAAGTACGGCCCCGATGATATGGAGAAT
TTCTTGTTGGATCTGTTTGAGGGATCTCCAAGATCATTACATGGTTCTTCTCACAGGGGA
AAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400021888
PEP Infomation

pacid=37463584 transcript=PGSC0003DMT400032221 locus=PGSC0003DMG400012380 ID=PGSC0003DMT400032221.v4.03 annot-version=v4.03
Sequence

MGDSVPVPVLEGEEKLIAAAHQIVKALHNKKDFLTHDARKILADLGSQLMSSITKLDTLQ
QSNSKSLEDQLNILQNKIMSWEELEDHQSVIWNCGQEYVHDYLTSVDQLLKFTQQLESNN
LGVDKPLDDLLISRAHQLVRTAMNRLQQEFKHLLVQNKQPFQPEHMSFRSNEDDDTSIAS
FGDDSLEDVLQRDSMSRRSEEYISVVELVHPDVIPDLRCIANLMFNSNYSTDCSQAFVNV
RRDALDDFLFILEADKLCIDDVLKMEWNSLNSKIRRWIRCMNIFVRVYLASEKWLSDQIF
GELDHSVSSVCFVESSKGSILHLLKFAESVAIGSHQPEKLIRILDMYEVLSDLMPDIDVM
FSDDAGLCVRTECQHILTSLAGCARTTFLEFEHAVASSVSANPFRGGGIHHLTRYVMNYM
KTLTDYSKILNELLKGDEEEEDSPQDMTPDREEEEEDNSNGSSCYISPLAQYFRSFTSIL
ECNLDDKSKLYKDESLGHLFLMNNIHYMAEKVKNSHDLRTILGDDWIRKHNWRFQQHAMN
YERATWSSILSLLREEGVHNPGSNSISRTLLKERLQCFYAAFDEVYKSQTGWLIQDSQLR
DDLRISTSLKVIQAYRTFIGRHSNHISDKYIKYGPDDMENFLLDLFEGSPRSLHGSSHRG
K*

Transcript Sequence

Transcript ID

PGSC0003DMT400032221
Transcript Infomation

pacid=37463584 locus=PGSC0003DMG400012380 ID=PGSC0003DMT400032221.v4.03 annot-version=v4.03
Sequence

ATGGGAGACTCTGTTCCTGTTCCTGTATTGGAAGGAGAAGAAAAATTGATTGCTGCTGCA
CACCAGATTGTTAAAGCATTGCACAATAAGAAGGATTTTTTAACACATGATGCAAGAAAA
ATCCTGGCTGATTTAGGCTCTCAATTAATGTCCTCTATAACCAAACTAGACACTTTACAA
CAATCCAATTCCAAATCCCTTGAGGATCAGCTTAACATATTGCAAAATAAGATCATGAGC
TGGGAGGAGTTAGAAGATCATCAATCAGTTATATGGAATTGTGGCCAAGAATATGTACAT
GATTATTTGACATCTGTTGATCAACTTCTAAAATTCACTCAACAGTTAGAGAGTAATAAT
TTGGGGGTGGATAAACCACTTGATGACCTTCTCATCTCTAGGGCTCACCAACTTGTTCGA
ACAGCAATGAATCGGCTTCAGCAGGAGTTTAAGCACTTGCTTGTTCAGAATAAGCAGCCT
TTCCAGCCAGAGCATATGTCTTTTCGTTCAAACGAAGATGATGACACTTCAATTGCTTCA
TTCGGAGATGATTCACTAGAAGATGTGCTTCAAAGGGATAGCATGAGTAGACGTTCCGAG
GAATATATATCTGTTGTTGAACTTGTGCATCCTGATGTCATTCCTGACTTAAGGTGTATC
GCAAATTTGATGTTCAATTCAAATTATAGTACAGACTGCTCTCAAGCATTTGTTAATGTA
AGGAGAGATGCATTGGATGATTTCTTATTCATTCTTGAAGCGGATAAGTTGTGTATTGAC
GATGTGCTTAAGATGGAATGGAACTCATTGAACTCAAAAATCAGGAGGTGGATACGTTGT
ATGAACATCTTTGTGCGCGTTTATCTTGCAAGCGAGAAATGGTTAAGTGATCAAATATTT
GGTGAACTAGATCATTCAGTGAGTTCAGTATGCTTCGTTGAGTCTTCAAAAGGTTCAATA
TTGCATCTTTTGAAGTTTGCTGAATCAGTAGCTATTGGATCTCATCAACCAGAGAAGTTG
ATTCGGATTCTTGACATGTACGAGGTTCTTTCAGATCTCATGCCAGATATCGATGTTATG
TTCTCTGATGATGCTGGATTATGTGTTAGGACAGAGTGCCAACACATCCTTACAAGTTTG
GCTGGTTGTGCAAGGACAACTTTTCTTGAATTTGAACATGCTGTTGCTTCTAGCGTATCA
GCAAATCCTTTTCGTGGTGGTGGAATACACCACCTCACGAGGTACGTTATGAACTACATG
AAAACTTTAACGGATTATAGCAAGATCCTCAATGAGCTACTGAAGGGCGATGAAGAGGAG
GAAGATTCACCACAAGACATGACACCGGATAGAGAAGAAGAAGAAGAAGATAACAGTAAC
GGATCAAGTTGTTACATTTCTCCGTTGGCTCAATATTTTAGATCATTCACTTCAATTTTG
GAATGCAACCTTGATGACAAGTCGAAGTTATATAAGGATGAATCATTAGGTCACCTTTTC
TTGATGAATAATATTCACTACATGGCTGAAAAGGTGAAGAATTCTCATGATCTAAGAACA
ATACTAGGCGATGATTGGATTCGCAAACATAATTGGAGATTCCAACAACATGCAATGAAC
TATGAGAGAGCTACTTGGAGTTCCATCCTCTCGTTACTTAGGGAAGAAGGGGTTCATAAT
CCAGGATCAAATTCTATTTCAAGAACTCTGCTGAAAGAGAGACTGCAATGCTTTTACGCC
GCATTTGATGAAGTTTACAAGAGCCAAACAGGTTGGTTGATTCAAGATTCCCAACTTCGT
GATGATCTACGTATCTCAACGTCTCTCAAGGTTATCCAAGCATATAGGACTTTTATTGGA
AGGCACAGTAATCATATTAGTGATAAATATATTAAGTACGGCCCCGATGATATGGAGAAT
TTCTTGTTGGATCTGTTTGAGGGATCTCCAAGATCATTACATGGTTCTTCTCACAGGGGA
AAATGA