Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032164
CDS Infomation

pacid=37469531 polypeptide=PGSC0003DMP400021859 locus=PGSC0003DMG400012349 ID=PGSC0003DMT400032164.v4.03 annot-version=v4.03
Sequence

ATGGCGGAACTTGCTGTCAAAATAGAGATACCCCAGAAAGCTGAAGATAAGAAAGATGAA
GAATTGGAGGAATTGGAAGAGGAAGATGAAGAGGGAGAGTTATCATGGTCTTCCGACTCT
GAAATTGGTGAAGCTTTGGATTATTTGGACACAAAAGATAATTCTGAATCGAATGTTGGT
GCTTTTAGTCTCCAAACAAGGCGCCCAAATGCTCATGGAGGACTTCATACTAGACCCAAT
TCTTCTGCTTTCCAACCCCTTTCTAATCGTACCCAGAAATTTGCTAATCATATCAGAGCT
TCACCATTAGAGGAATGGGAAGGGAGGATCAAAGTTGGCATGTCAAATTCTGTGACTACT
GCAATTCGTGGAAGTGTCCGGGATATGGCTATTGGTAAAACTAGAACGACTGAGAAAGCA
GACCGCGCCACTGTTGAACAGGCAATTGATCCAAGAACACGAATGGTTTTGTTTAAAATG
CTCAATCGCGGTGTCTTTCATGATATTAATGGCTGTATTTCAACTGGGAAAGAGGCCAAT
GTTTATCATGCAACAAAAGTCGATGGTCAGGAACTGGCGATCAAAGTATACAAAACTTCA
GTTCTTGTATTCAAGGATAGAGATCGCTACGTACAGGGTGACTATCGCTTCAGACATGGA
TACTGCAAGCACAATCCACGGAAAATGGTTAAAACATGGGCTGAGAAGGAAATGAGGAAT
CTAATGAGGCTAAGGGCAGCTGGAATCAGGTGCCCAGCTCCAATTCTCTTGAGGCTTCAT
GTTCTTGTTATGGAATTCATAGGGAAAGGAGGCTGGGCAGCACCTCGACTAAAGGATGCT
GCTTTATCTAGTGACAAGTTACGTGAATGTTATGTGGAGATCATTATGGCAATGAGAACT
CTATATCAGAAATGCAAGCTAGTGCATGGTGACTTAAGCGAGTATAACATCCTATATTTC
GAGGGTCACCTGTATGTTATTGATGTTTCGCAATCAGTTGATCTTGACCATCCTCATGCA
CTTGATTTCCTCCGAGAGGATTGTGTACATGTTTCTGACTTCTTTAAAAAACATGGTGTG
GCTGTTATGACAATCCGGGAGTTGTTTGATTTTATAGTTGATCCAACTATTGATGATGAT
TCAGTGGATAGCTATTTGGAGAAGGTTCAAGAGAGAATTTTGGCTAGAGGTGACATGACT
GCAGAAGAAGAAATTGCCGACTCTGTATTTATTCAGTCATTTATTCCCAAGACACTTGAT
CATGTGAAAGACGCTGAAGCAGATGTTCAACGCATTATTAGTGGTGAGGACACAGGAGAC
ATGTACTACAAAACTATTACAGGTCTGAAGCAGGCTCTCTCTGGGACAAACCCTTCAGCA
GAAGATCACCAGCACCAACAAATTGACGAACGAGGACAAGAGACCACTGCTGCAGCTGAA
ACCAACAAACCATATGATGGTGAATCAGAGACAGAGACCGAGTCAGATGATGACAATGAC
GATGAAAGTGATTGTAGTGAAGGCTCATTATCTGATGGCGAGAAACCAACAGCTGCTGAT
AAGAAAGCAGCTAGAAAAGAGAACAAGAAGAAAGTTAAAGAAGAGAAAAGAGAATCGCGG
AAACATAAAGTACCAAAAGCTGTGAAGAAGAAGAAGAAAAAGTTGGCCAAGGCCAAGAAG
TACCGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400021859
PEP Infomation

pacid=37469531 transcript=PGSC0003DMT400032164 locus=PGSC0003DMG400012349 ID=PGSC0003DMT400032164.v4.03 annot-version=v4.03
Sequence

MAELAVKIEIPQKAEDKKDEELEELEEEDEEGELSWSSDSEIGEALDYLDTKDNSESNVG
AFSLQTRRPNAHGGLHTRPNSSAFQPLSNRTQKFANHIRASPLEEWEGRIKVGMSNSVTT
AIRGSVRDMAIGKTRTTEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEAN
VYHATKVDGQELAIKVYKTSVLVFKDRDRYVQGDYRFRHGYCKHNPRKMVKTWAEKEMRN
LMRLRAAGIRCPAPILLRLHVLVMEFIGKGGWAAPRLKDAALSSDKLRECYVEIIMAMRT
LYQKCKLVHGDLSEYNILYFEGHLYVIDVSQSVDLDHPHALDFLREDCVHVSDFFKKHGV
AVMTIRELFDFIVDPTIDDDSVDSYLEKVQERILARGDMTAEEEIADSVFIQSFIPKTLD
HVKDAEADVQRIISGEDTGDMYYKTITGLKQALSGTNPSAEDHQHQQIDERGQETTAAAE
TNKPYDGESETETESDDDNDDESDCSEGSLSDGEKPTAADKKAARKENKKKVKEEKRESR
KHKVPKAVKKKKKKLAKAKKYR*

Transcript Sequence

Transcript ID

PGSC0003DMT400032164
Transcript Infomation

pacid=37469531 locus=PGSC0003DMG400012349 ID=PGSC0003DMT400032164.v4.03 annot-version=v4.03
Sequence

ATGGCGGAACTTGCTGTCAAAATAGAGATACCCCAGAAAGCTGAAGATAAGAAAGATGAA
GAATTGGAGGAATTGGAAGAGGAAGATGAAGAGGGAGAGTTATCATGGTCTTCCGACTCT
GAAATTGGTGAAGCTTTGGATTATTTGGACACAAAAGATAATTCTGAATCGAATGTTGGT
GCTTTTAGTCTCCAAACAAGGCGCCCAAATGCTCATGGAGGACTTCATACTAGACCCAAT
TCTTCTGCTTTCCAACCCCTTTCTAATCGTACCCAGAAATTTGCTAATCATATCAGAGCT
TCACCATTAGAGGAATGGGAAGGGAGGATCAAAGTTGGCATGTCAAATTCTGTGACTACT
GCAATTCGTGGAAGTGTCCGGGATATGGCTATTGGTAAAACTAGAACGACTGAGAAAGCA
GACCGCGCCACTGTTGAACAGGCAATTGATCCAAGAACACGAATGGTTTTGTTTAAAATG
CTCAATCGCGGTGTCTTTCATGATATTAATGGCTGTATTTCAACTGGGAAAGAGGCCAAT
GTTTATCATGCAACAAAAGTCGATGGTCAGGAACTGGCGATCAAAGTATACAAAACTTCA
GTTCTTGTATTCAAGGATAGAGATCGCTACGTACAGGGTGACTATCGCTTCAGACATGGA
TACTGCAAGCACAATCCACGGAAAATGGTTAAAACATGGGCTGAGAAGGAAATGAGGAAT
CTAATGAGGCTAAGGGCAGCTGGAATCAGGTGCCCAGCTCCAATTCTCTTGAGGCTTCAT
GTTCTTGTTATGGAATTCATAGGGAAAGGAGGCTGGGCAGCACCTCGACTAAAGGATGCT
GCTTTATCTAGTGACAAGTTACGTGAATGTTATGTGGAGATCATTATGGCAATGAGAACT
CTATATCAGAAATGCAAGCTAGTGCATGGTGACTTAAGCGAGTATAACATCCTATATTTC
GAGGGTCACCTGTATGTTATTGATGTTTCGCAATCAGTTGATCTTGACCATCCTCATGCA
CTTGATTTCCTCCGAGAGGATTGTGTACATGTTTCTGACTTCTTTAAAAAACATGGTGTG
GCTGTTATGACAATCCGGGAGTTGTTTGATTTTATAGTTGATCCAACTATTGATGATGAT
TCAGTGGATAGCTATTTGGAGAAGGTTCAAGAGAGAATTTTGGCTAGAGGTGACATGACT
GCAGAAGAAGAAATTGCCGACTCTGTATTTATTCAGTCATTTATTCCCAAGACACTTGAT
CATGTGAAAGACGCTGAAGCAGATGTTCAACGCATTATTAGTGGTGAGGACACAGGAGAC
ATGTACTACAAAACTATTACAGGTCTGAAGCAGGCTCTCTCTGGGACAAACCCTTCAGCA
GAAGATCACCAGCACCAACAAATTGACGAACGAGGACAAGAGACCACTGCTGCAGCTGAA
ACCAACAAACCATATGATGGTGAATCAGAGACAGAGACCGAGTCAGATGATGACAATGAC
GATGAAAGTGATTGTAGTGAAGGCTCATTATCTGATGGCGAGAAACCAACAGCTGCTGAT
AAGAAAGCAGCTAGAAAAGAGAACAAGAAGAAAGTTAAAGAAGAGAAAAGAGAATCGCGG
AAACATAAAGTACCAAAAGCTGTGAAGAAGAAGAAGAAAAAGTTGGCCAAGGCCAAGAAG
TACCGGTAA