Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032146
CDS Infomation

pacid=37469442 polypeptide=PGSC0003DMP400021847 locus=PGSC0003DMG400012340 ID=PGSC0003DMT400032146.v4.03 annot-version=v4.03
Sequence

ATGGAGTTGGATTTCGACAAGTATTGTGTAGTAGATGGAAGTCCTACAACTGTTCTTCCA
TCTCCGCGGCACCGTCTAAAAGGTGAAAGGAGAAAAAGCAAAGGAAATTCCAAATGCAGC
AAAGAAGTATTGTCTGTAGATGGGGACTTCACTGAGATAAGCTTTCATCGGTATCGTAGC
GTGTCGTGTAAAGATGCTCCATCAAGGAAATCACATTTGGGAGGAAATGATATCCTAAAG
AGGGGCTCTGTCTATCAAAGTTCTAGAGATGTTAGAGGCATCAAGAAAACTGATGCTGTT
GAGGAAAGAAGAAAAATCGAGTTCTCTAGGGGCAATACTAATGCATTCTCATTTGGTATT
GTTGATGTTTTATGTGGTTCAGATGAGGATAATTCACTCATAGATAAACATAGATCCTCG
TTCAAACTTACACCTGAGAGCGATGTACCATCAGATAGCTCTCTAGGAAGTTCTTTAAAT
TCTGATCATAGAGAAAATAGAAGGACTCAAATTCCACCAAGACAGTCAGCTCAAGATTCA
AAAATCATGTCTCAATCCGTTGCTGACCGTCTATGTGAAGTTAACAGACTAACGGATAGG
GATCCATCTGTGTCTTTATCCAAATCACTGTCTGCAAAGTTAGCATTACCACATTCGCCT
GCTTGGTCAGAAAGTGATAGCTCCAGGACTAGCAGCCAAAAATCCCGTTTCAGCCCTATA
AGAAAGATGTTTGATCCATTTGGTAAATCAAAGTCTCTGAAAAGTCCATTGAGTTATACT
TTCGAAACTGGCACAAATATTAAGAATAATCCTGTTAATGCCAGTAGAGGCAGAACAGTT
CATAAATCTCTATTGCATGATTTCTCAAGCATACCTGAGCCAGTGGAATGTAATTCAAAT
GTGCAAAGTTTACCAGCTCACTTACACGGCATGCTCAGGTCGGATAAGAAAAGTGGATTG
CCCTTCTTTGAGTTTTCAGTAAAGTCACCTGAAGATAGTTTTGTTGCGAAGTCATGGAAA
GTTGAGGATACCTTAAATTGGGTGTACACATTTCATTCTATTCACCACAAAAGGAAGAGC
AATGCTAGTGGTGGATGGGGATCAAAAGATAGCGTTAGAGAACCGTTGTTGGTTGGGCGG
ATGCAAGTTTCCTGTTATTTATGTACAGATATTAAAAACGCTGGAGATTGCGACAACTCA
ATGGTGACAGAGTTTGTCTTGTATGAGACTCCCCATTCAAGAAAAAGAGTTTCTTTTCAA
CAAAGTTGTTGTTCTTCCCCTGATGTCACTATTGCACCTAAGGCCTCAGATGAGAAGTCG
TCTGGAGCTAATTGTGAAACCGTAGAGGTTGAAATTGCAGCGATTGCTATAGAGGTACCA
TTTGAAAAGAGAGAGAGTTTAAAATTCAGAAGTGGGGATGCAAAGGCTGATCAGCCACTT
CCAAACTTACTGGATCTCTCTGTGGTTGAACAAAGAATTGGACATTCTGATAGTGTAAGC
CCCGCCAAGGTGAACGTTGTGATCCCTTCCGGACACCATGGTCGTCCAACAACTGAAAGT
CCTGGTCCTTCCCCCTTGTTGGATAGATGGAGGATGGGCGGAGGTTGTGACTGTGGCGGC
TGGGACATGGCATGCCCTCTTCACATATTTGGCAATCCAAATATTCGTATTGATGACAAC
CGTCCTCTGGTCGAGAGGCAGCAGCCATTGGAACTCTTCATTCAGGGAAGAAAAGATAAA
GCTCCAGCGTTGACCATGACGCTTAAGGAGGATGGACAATATTCAGTTGATTTCCATGCT
CAGTTGTCTGCATTACAAGCATTCTCTATTTGTGTCTCAATTTTGCACTCCATGGAAACC
TCGATTGCTGAGGGAAAAGAGAACAATGTAGAATCTTTGCAATCCAACTCGTTGAAGGTG
TTTGTTCAGGATGATGACATTAAAGGCTTGATCAATGCAGCTAGAGAGGAAAAGAAACAG
AAAGTACACAAGAAAGTGGAACAAGTATTCCCATCTTTCGTGCTCAATCCACCATTCTCT
CCAATTGGTCGAGTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400021847
PEP Infomation

pacid=37469442 transcript=PGSC0003DMT400032146 locus=PGSC0003DMG400012340 ID=PGSC0003DMT400032146.v4.03 annot-version=v4.03
Sequence

MELDFDKYCVVDGSPTTVLPSPRHRLKGERRKSKGNSKCSKEVLSVDGDFTEISFHRYRS
VSCKDAPSRKSHLGGNDILKRGSVYQSSRDVRGIKKTDAVEERRKIEFSRGNTNAFSFGI
VDVLCGSDEDNSLIDKHRSSFKLTPESDVPSDSSLGSSLNSDHRENRRTQIPPRQSAQDS
KIMSQSVADRLCEVNRLTDRDPSVSLSKSLSAKLALPHSPAWSESDSSRTSSQKSRFSPI
RKMFDPFGKSKSLKSPLSYTFETGTNIKNNPVNASRGRTVHKSLLHDFSSIPEPVECNSN
VQSLPAHLHGMLRSDKKSGLPFFEFSVKSPEDSFVAKSWKVEDTLNWVYTFHSIHHKRKS
NASGGWGSKDSVREPLLVGRMQVSCYLCTDIKNAGDCDNSMVTEFVLYETPHSRKRVSFQ
QSCCSSPDVTIAPKASDEKSSGANCETVEVEIAAIAIEVPFEKRESLKFRSGDAKADQPL
PNLLDLSVVEQRIGHSDSVSPAKVNVVIPSGHHGRPTTESPGPSPLLDRWRMGGGCDCGG
WDMACPLHIFGNPNIRIDDNRPLVERQQPLELFIQGRKDKAPALTMTLKEDGQYSVDFHA
QLSALQAFSICVSILHSMETSIAEGKENNVESLQSNSLKVFVQDDDIKGLINAAREEKKQ
KVHKKVEQVFPSFVLNPPFSPIGRV*

Transcript Sequence

Transcript ID

PGSC0003DMT400032146
Transcript Infomation

pacid=37469442 locus=PGSC0003DMG400012340 ID=PGSC0003DMT400032146.v4.03 annot-version=v4.03
Sequence

ATGGAGTTGGATTTCGACAAGTATTGTGTAGTAGATGGAAGTCCTACAACTGTTCTTCCA
TCTCCGCGGCACCGTCTAAAAGGTGAAAGGAGAAAAAGCAAAGGAAATTCCAAATGCAGC
AAAGAAGTATTGTCTGTAGATGGGGACTTCACTGAGATAAGCTTTCATCGGTATCGTAGC
GTGTCGTGTAAAGATGCTCCATCAAGGAAATCACATTTGGGAGGAAATGATATCCTAAAG
AGGGGCTCTGTCTATCAAAGTTCTAGAGATGTTAGAGGCATCAAGAAAACTGATGCTGTT
GAGGAAAGAAGAAAAATCGAGTTCTCTAGGGGCAATACTAATGCATTCTCATTTGGTATT
GTTGATGTTTTATGTGGTTCAGATGAGGATAATTCACTCATAGATAAACATAGATCCTCG
TTCAAACTTACACCTGAGAGCGATGTACCATCAGATAGCTCTCTAGGAAGTTCTTTAAAT
TCTGATCATAGAGAAAATAGAAGGACTCAAATTCCACCAAGACAGTCAGCTCAAGATTCA
AAAATCATGTCTCAATCCGTTGCTGACCGTCTATGTGAAGTTAACAGACTAACGGATAGG
GATCCATCTGTGTCTTTATCCAAATCACTGTCTGCAAAGTTAGCATTACCACATTCGCCT
GCTTGGTCAGAAAGTGATAGCTCCAGGACTAGCAGCCAAAAATCCCGTTTCAGCCCTATA
AGAAAGATGTTTGATCCATTTGGTAAATCAAAGTCTCTGAAAAGTCCATTGAGTTATACT
TTCGAAACTGGCACAAATATTAAGAATAATCCTGTTAATGCCAGTAGAGGCAGAACAGTT
CATAAATCTCTATTGCATGATTTCTCAAGCATACCTGAGCCAGTGGAATGTAATTCAAAT
GTGCAAAGTTTACCAGCTCACTTACACGGCATGCTCAGGTCGGATAAGAAAAGTGGATTG
CCCTTCTTTGAGTTTTCAGTAAAGTCACCTGAAGATAGTTTTGTTGCGAAGTCATGGAAA
GTTGAGGATACCTTAAATTGGGTGTACACATTTCATTCTATTCACCACAAAAGGAAGAGC
AATGCTAGTGGTGGATGGGGATCAAAAGATAGCGTTAGAGAACCGTTGTTGGTTGGGCGG
ATGCAAGTTTCCTGTTATTTATGTACAGATATTAAAAACGCTGGAGATTGCGACAACTCA
ATGGTGACAGAGTTTGTCTTGTATGAGACTCCCCATTCAAGAAAAAGAGTTTCTTTTCAA
CAAAGTTGTTGTTCTTCCCCTGATGTCACTATTGCACCTAAGGCCTCAGATGAGAAGTCG
TCTGGAGCTAATTGTGAAACCGTAGAGGTTGAAATTGCAGCGATTGCTATAGAGGTACCA
TTTGAAAAGAGAGAGAGTTTAAAATTCAGAAGTGGGGATGCAAAGGCTGATCAGCCACTT
CCAAACTTACTGGATCTCTCTGTGGTTGAACAAAGAATTGGACATTCTGATAGTGTAAGC
CCCGCCAAGGTGAACGTTGTGATCCCTTCCGGACACCATGGTCGTCCAACAACTGAAAGT
CCTGGTCCTTCCCCCTTGTTGGATAGATGGAGGATGGGCGGAGGTTGTGACTGTGGCGGC
TGGGACATGGCATGCCCTCTTCACATATTTGGCAATCCAAATATTCGTATTGATGACAAC
CGTCCTCTGGTCGAGAGGCAGCAGCCATTGGAACTCTTCATTCAGGGAAGAAAAGATAAA
GCTCCAGCGTTGACCATGACGCTTAAGGAGGATGGACAATATTCAGTTGATTTCCATGCT
CAGTTGTCTGCATTACAAGCATTCTCTATTTGTGTCTCAATTTTGCACTCCATGGAAACC
TCGATTGCTGAGGGAAAAGAGAACAATGTAGAATCTTTGCAATCCAACTCGTTGAAGGTG
TTTGTTCAGGATGATGACATTAAAGGCTTGATCAATGCAGCTAGAGAGGAAAAGAAACAG
AAAGTACACAAGAAAGTGGAACAAGTATTCCCATCTTTCGTGCTCAATCCACCATTCTCT
CCAATTGGTCGAGTATAG