Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032136
CDS Infomation

pacid=37468010 polypeptide=PGSC0003DMP400021838 locus=PGSC0003DMG401012338 ID=PGSC0003DMT400032136.v4.03 annot-version=v4.03
Sequence

ATGGATTTTCTGAGAATTACTTCTCTAATTTTCATCTGTGGAGTTCTACTGAACTTTCCT
GCTATAGTTACAGCTGGTGATATTGTTCATGATGATGACTTAGCTCCCAAGAAGCCTGGT
TGTGAGAATGATTTTGTGCTGGTGAAAGTTCAAACTTGGATTAATGGGGAAGAGGATGCA
GAATTTGTTGGTGTTGGTGCTAGATTTGGCACTACTATTGTGTCAAAGGAGAAAAATGCA
CAACAAACTCCGCTTACTCTTTCTGACCCTCGGGATTGTTGCAAGCCTCCAAGGAAAAAG
CTTTCTGGAGAAGTCGTCATGGTAGATCGCGGCCATTGCAAATTCACAACGAAGGCTAAT
AATGCTGAAGCAGCAGGGGCTTCGGCAATCCTGATAGTAAATAATGAAAAAGAACTCTAC
AAGATGGTTTGTGATCCTGGAGAAACTGACCTAGATATACACATACCTGCTGTTATGCTA
CCTCAGGATGCTGGAATAACGCTTAATAAAATGCTTTTAAATGGCTCATCAGTTACCGTG
CAACTCTATTCTCCAAAACGACCAGTAGTGGACATTGCAGAAGTATTTTTGTGGCTGATG
GCTGTTGGTACAATCTTGTGTGGTTCTTATTGGTCTGCTGGGAGTGCTAGAGAAGCAGCT
ATAGAGCAGGACAAGCTGTTGAAGGATGCTTCAGAGAAAGAGCTTCCAAATTTTGGAACT
GGTGATTCAAGCACCGTGATGGATATAAACATGATATCAGCAGTCTTATTTGTTGTTGTT
GCTTCTTGCTTCTTGATTGTTTTGTATAAGTTAATGAGGTTCACATGGTTCTTTGAAATT
TTAGTGGTTCTCTTCTGCATCGGTGGTGTGGAGGGGCTACAAACTTGCTTAGTTGCCTTG
CTAGCAAGGTGGTTTAAGCGTACGGGACAGTTATACATTAAAGTACCCATTTTTGGTGCA
GTTTCTTATCTTACTTTGGCTGTTTCGCCATTCTGCATAACTTTTGCAGTGGTTTGGGCA
GTGTACAGAAATTCTTCTTTTGGCTGGATAGGTCAAGACATACTTGGTATCGCACTTATA
ATTACAGTTCTGCAAATTGTGCGGATACCTAATCTCAAGGTTGGTTCAGTTCTTTTGGGT
TGTGCCTTCATCTACGACATATTTTGGGTATTTGCTTCTCAGAGTCTCTTCCATGAAAGT
GTGATGATTGTGGTAGCTCGTGGTGATAAAAGTGGAGAGGATGGTATTCCAATGCTGCTG
AAGATTCCACGACTATTTGATCCATGGGGTGGTTACAGCATAATCGGCTTTGGTGACATC
CTATTGCCTGGCCTGCTAGTAGCATTTTCACTTAGGTATGATTGGCTTGCAAAGAAGAAT
CTTCGAGCTGGTTACTTCTTGTGGGCGATGATTGCATATGGATTAGGTCTTCTTATAACA
TATGTAGCATTGAACTTAATGGATGGTCATGGCCAACCTGCACTTCTTTACATCGTCCCA
TTTACCCTCGGGACCTTTTTGATGCTGGGGAGAAAGAGAGGTGACCTGAAAATTCTTTGG
ACAAAGGGTGAACCAGAAAGGGTGTGCCCACATGTTTGTCTCATATCAATCGAAGAATCG
AATCGAGAAGGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400021838
PEP Infomation

pacid=37468010 transcript=PGSC0003DMT400032136 locus=PGSC0003DMG401012338 ID=PGSC0003DMT400032136.v4.03 annot-version=v4.03
Sequence

MDFLRITSLIFICGVLLNFPAIVTAGDIVHDDDLAPKKPGCENDFVLVKVQTWINGEEDA
EFVGVGARFGTTIVSKEKNAQQTPLTLSDPRDCCKPPRKKLSGEVVMVDRGHCKFTTKAN
NAEAAGASAILIVNNEKELYKMVCDPGETDLDIHIPAVMLPQDAGITLNKMLLNGSSVTV
QLYSPKRPVVDIAEVFLWLMAVGTILCGSYWSAGSAREAAIEQDKLLKDASEKELPNFGT
GDSSTVMDINMISAVLFVVVASCFLIVLYKLMRFTWFFEILVVLFCIGGVEGLQTCLVAL
LARWFKRTGQLYIKVPIFGAVSYLTLAVSPFCITFAVVWAVYRNSSFGWIGQDILGIALI
ITVLQIVRIPNLKVGSVLLGCAFIYDIFWVFASQSLFHESVMIVVARGDKSGEDGIPMLL
KIPRLFDPWGGYSIIGFGDILLPGLLVAFSLRYDWLAKKNLRAGYFLWAMIAYGLGLLIT
YVALNLMDGHGQPALLYIVPFTLGTFLMLGRKRGDLKILWTKGEPERVCPHVCLISIEES
NREG*

Transcript Sequence

Transcript ID

PGSC0003DMT400032136
Transcript Infomation

pacid=37468010 locus=PGSC0003DMG401012338 ID=PGSC0003DMT400032136.v4.03 annot-version=v4.03
Sequence

ATGGATTTTCTGAGAATTACTTCTCTAATTTTCATCTGTGGAGTTCTACTGAACTTTCCT
GCTATAGTTACAGCTGGTGATATTGTTCATGATGATGACTTAGCTCCCAAGAAGCCTGGT
TGTGAGAATGATTTTGTGCTGGTGAAAGTTCAAACTTGGATTAATGGGGAAGAGGATGCA
GAATTTGTTGGTGTTGGTGCTAGATTTGGCACTACTATTGTGTCAAAGGAGAAAAATGCA
CAACAAACTCCGCTTACTCTTTCTGACCCTCGGGATTGTTGCAAGCCTCCAAGGAAAAAG
CTTTCTGGAGAAGTCGTCATGGTAGATCGCGGCCATTGCAAATTCACAACGAAGGCTAAT
AATGCTGAAGCAGCAGGGGCTTCGGCAATCCTGATAGTAAATAATGAAAAAGAACTCTAC
AAGATGGTTTGTGATCCTGGAGAAACTGACCTAGATATACACATACCTGCTGTTATGCTA
CCTCAGGATGCTGGAATAACGCTTAATAAAATGCTTTTAAATGGCTCATCAGTTACCGTG
CAACTCTATTCTCCAAAACGACCAGTAGTGGACATTGCAGAAGTATTTTTGTGGCTGATG
GCTGTTGGTACAATCTTGTGTGGTTCTTATTGGTCTGCTGGGAGTGCTAGAGAAGCAGCT
ATAGAGCAGGACAAGCTGTTGAAGGATGCTTCAGAGAAAGAGCTTCCAAATTTTGGAACT
GGTGATTCAAGCACCGTGATGGATATAAACATGATATCAGCAGTCTTATTTGTTGTTGTT
GCTTCTTGCTTCTTGATTGTTTTGTATAAGTTAATGAGGTTCACATGGTTCTTTGAAATT
TTAGTGGTTCTCTTCTGCATCGGTGGTGTGGAGGGGCTACAAACTTGCTTAGTTGCCTTG
CTAGCAAGGTGGTTTAAGCGTACGGGACAGTTATACATTAAAGTACCCATTTTTGGTGCA
GTTTCTTATCTTACTTTGGCTGTTTCGCCATTCTGCATAACTTTTGCAGTGGTTTGGGCA
GTGTACAGAAATTCTTCTTTTGGCTGGATAGGTCAAGACATACTTGGTATCGCACTTATA
ATTACAGTTCTGCAAATTGTGCGGATACCTAATCTCAAGGTTGGTTCAGTTCTTTTGGGT
TGTGCCTTCATCTACGACATATTTTGGGTATTTGCTTCTCAGAGTCTCTTCCATGAAAGT
GTGATGATTGTGGTAGCTCGTGGTGATAAAAGTGGAGAGGATGGTATTCCAATGCTGCTG
AAGATTCCACGACTATTTGATCCATGGGGTGGTTACAGCATAATCGGCTTTGGTGACATC
CTATTGCCTGGCCTGCTAGTAGCATTTTCACTTAGGTATGATTGGCTTGCAAAGAAGAAT
CTTCGAGCTGGTTACTTCTTGTGGGCGATGATTGCATATGGATTAGGTCTTCTTATAACA
TATGTAGCATTGAACTTAATGGATGGTCATGGCCAACCTGCACTTCTTTACATCGTCCCA
TTTACCCTCGGGACCTTTTTGATGCTGGGGAGAAAGAGAGGTGACCTGAAAATTCTTTGG
ACAAAGGGTGAACCAGAAAGGGTGTGCCCACATGTTTGTCTCATATCAATCGAAGAATCG
AATCGAGAAGGATAA