Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032122
CDS Infomation

pacid=37468202 polypeptide=PGSC0003DMP400021824 locus=PGSC0003DMG400012329 ID=PGSC0003DMT400032122.v4.03 annot-version=v4.03
Sequence

ATGGCTAGTCATCATCAAGAAAGTATTCGCGAAGAGATTAAACCAAGATCATCATCAATG
GTTACTAGTACTGGTTATTGGTTTTCATCAGATACAAATAATCCTAATCCAACACCACAT
AATATGGTGAATCATCAGTTGCAAAATTTTGAAACAAATCCAGAGATGTACAATTTGAGT
AGTACTACTTCTAGTATGGATCAAATGATAGGGTTTCCACCAAACAACAATAATCCTCAT
CATGTGTTGTGGAAAGGTAATTTTCTTAACAAGATCAATGGTGTTGATGATGATGATGAT
CATGGTCCTTCGTCTTCTAAGAACATTAGTGAACAATTTTACCAACATGGTAGTCATGAA
AATATGTTGACAACCACAACTACTCATCATGATGATCATCAAGGCTCGTGGCATCACGAT
AATAACAGAACATTACTTGTTGATGATCCATCTATGAGATGTGTTTTCCCTTGTGAAGGA
AATGAAAGGCCAAGTCAAGGACTTTCATTATCTCTTTGTTCCTCAAATCCACCAAGTATT
GGTTTACAATCTTTTGAACTTAGACATCAAGATTTGCAACAAGGACTAATACATGATGGA
TTTTTGGGTAAATCTACAAATATACAACAAGGGTATTTTCATCATCATCATCAAGTTAGG
GACTCGAAATACTTGGGTCCGGCTCAAGAGTTGCTCAGTGAGTTCTGTAGTCTCGGAATA
AAGAAGAATAATGATCATTCTTCTTCAAAAGTACTTCTAAAGCAACATGAGAGTACTGCT
AGTACTTCAAAAAAGCAACTTTTACAGTCTCTTGACCTTTTGGAACTTCAAAAAAGAAAG
ACAAAATTGCTTCAAATGCTTGAAGAGGTGGATAGAAGGTACAAGCATTATTGTGATCAA
ATGAAGGCTGTTGTATCATCATTTGAAGCAGTGGCTGGAAATGGAGCAGCAACAGTTTAC
TCAGCCTTAGCATCAAGGGCTATGTCAAGGCATTTTAGATGTTTAAGAGATGGAATTGTG
GCACAAATTAAGGCCACAAAAATGGCTATGGGAGAAAAAGACAGTACTAGTACTCTTATT
CCTGGTTCAACAAGAGGTGAAACACCAAGACTCAGACTTCTTGATCAAACTTTAAGGCAA
CAAAAGGCTTTCCAACAGATGAATATGATGGAGACTCATCCATGGAGACCGCAACGCGGT
CTCCCAGAAAGATCAGTCTCTGTCCTCCGCGCCTGGCTCTTTGAACACTTTCTTCACCCG
TACCCAAGTGATGTTGATAAACACATTTTAGCTCGCCAAACTGGTCTTTCAAGAAGCCAG
GTGTCTAATTGGTTCATTAATGCAAGGGTAAGGCTATGGAAGCCAATGGTGGAAGAAATG
TACATAGAAGAAACAAAAGAAGAAGAAAATGTTGGATCTCCAGATGGATCAAAAGCCCTA
ATTGATGACATGACAATTCATCAATCACACATTGATCATCATCAAGATCAAAAGCCAAAT
CTTGTAAGAATTGACTCTGAATGCATATCTTCCATCATAAATCATCACCCTCATGAGAAA
AATGATCAAAACTATGGAGTAATTAGAGGTGGAGATCAATCGTTTGGCGCGATTGAGCTA
GATTTTTCAACAAATATTGCTTATGGTACTAGTGGTGGTGATCATCATCATCATGGAGGG
GGTGTTTCTTTAACATTGGGATTACAACAACATGGTGGAAGTGGTGGATCATCAATGGGG
TTAACTACATTTTCATCACAACCATCTCATAATCAAAGTTCACTTTTTTATCCAAGAGAT
GATGATCAAGTTCAATATACATCACTTTTGGATAGTGAAAATCAGAATTTGCCATATAGA
AACTTGATGGGGGCACAACTTCTTCATGATTTGGCTGGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400021824
PEP Infomation

pacid=37468202 transcript=PGSC0003DMT400032122 locus=PGSC0003DMG400012329 ID=PGSC0003DMT400032122.v4.03 annot-version=v4.03
Sequence

MASHHQESIREEIKPRSSSMVTSTGYWFSSDTNNPNPTPHNMVNHQLQNFETNPEMYNLS
STTSSMDQMIGFPPNNNNPHHVLWKGNFLNKINGVDDDDDHGPSSSKNISEQFYQHGSHE
NMLTTTTTHHDDHQGSWHHDNNRTLLVDDPSMRCVFPCEGNERPSQGLSLSLCSSNPPSI
GLQSFELRHQDLQQGLIHDGFLGKSTNIQQGYFHHHHQVRDSKYLGPAQELLSEFCSLGI
KKNNDHSSSKVLLKQHESTASTSKKQLLQSLDLLELQKRKTKLLQMLEEVDRRYKHYCDQ
MKAVVSSFEAVAGNGAATVYSALASRAMSRHFRCLRDGIVAQIKATKMAMGEKDSTSTLI
PGSTRGETPRLRLLDQTLRQQKAFQQMNMMETHPWRPQRGLPERSVSVLRAWLFEHFLHP
YPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYIEETKEEENVGSPDGSKAL
IDDMTIHQSHIDHHQDQKPNLVRIDSECISSIINHHPHEKNDQNYGVIRGGDQSFGAIEL
DFSTNIAYGTSGGDHHHHGGGVSLTLGLQQHGGSGGSSMGLTTFSSQPSHNQSSLFYPRD
DDQVQYTSLLDSENQNLPYRNLMGAQLLHDLAG*

Transcript Sequence

Transcript ID

PGSC0003DMT400032122
Transcript Infomation

pacid=37468202 locus=PGSC0003DMG400012329 ID=PGSC0003DMT400032122.v4.03 annot-version=v4.03
Sequence

ATGGCTAGTCATCATCAAGAAAGTATTCGCGAAGAGATTAAACCAAGATCATCATCAATG
GTTACTAGTACTGGTTATTGGTTTTCATCAGATACAAATAATCCTAATCCAACACCACAT
AATATGGTGAATCATCAGTTGCAAAATTTTGAAACAAATCCAGAGATGTACAATTTGAGT
AGTACTACTTCTAGTATGGATCAAATGATAGGGTTTCCACCAAACAACAATAATCCTCAT
CATGTGTTGTGGAAAGGTAATTTTCTTAACAAGATCAATGGTGTTGATGATGATGATGAT
CATGGTCCTTCGTCTTCTAAGAACATTAGTGAACAATTTTACCAACATGGTAGTCATGAA
AATATGTTGACAACCACAACTACTCATCATGATGATCATCAAGGCTCGTGGCATCACGAT
AATAACAGAACATTACTTGTTGATGATCCATCTATGAGATGTGTTTTCCCTTGTGAAGGA
AATGAAAGGCCAAGTCAAGGACTTTCATTATCTCTTTGTTCCTCAAATCCACCAAGTATT
GGTTTACAATCTTTTGAACTTAGACATCAAGATTTGCAACAAGGACTAATACATGATGGA
TTTTTGGGTAAATCTACAAATATACAACAAGGGTATTTTCATCATCATCATCAAGTTAGG
GACTCGAAATACTTGGGTCCGGCTCAAGAGTTGCTCAGTGAGTTCTGTAGTCTCGGAATA
AAGAAGAATAATGATCATTCTTCTTCAAAAGTACTTCTAAAGCAACATGAGAGTACTGCT
AGTACTTCAAAAAAGCAACTTTTACAGTCTCTTGACCTTTTGGAACTTCAAAAAAGAAAG
ACAAAATTGCTTCAAATGCTTGAAGAGGTGGATAGAAGGTACAAGCATTATTGTGATCAA
ATGAAGGCTGTTGTATCATCATTTGAAGCAGTGGCTGGAAATGGAGCAGCAACAGTTTAC
TCAGCCTTAGCATCAAGGGCTATGTCAAGGCATTTTAGATGTTTAAGAGATGGAATTGTG
GCACAAATTAAGGCCACAAAAATGGCTATGGGAGAAAAAGACAGTACTAGTACTCTTATT
CCTGGTTCAACAAGAGGTGAAACACCAAGACTCAGACTTCTTGATCAAACTTTAAGGCAA
CAAAAGGCTTTCCAACAGATGAATATGATGGAGACTCATCCATGGAGACCGCAACGCGGT
CTCCCAGAAAGATCAGTCTCTGTCCTCCGCGCCTGGCTCTTTGAACACTTTCTTCACCCG
TACCCAAGTGATGTTGATAAACACATTTTAGCTCGCCAAACTGGTCTTTCAAGAAGCCAG
GTGTCTAATTGGTTCATTAATGCAAGGGTAAGGCTATGGAAGCCAATGGTGGAAGAAATG
TACATAGAAGAAACAAAAGAAGAAGAAAATGTTGGATCTCCAGATGGATCAAAAGCCCTA
ATTGATGACATGACAATTCATCAATCACACATTGATCATCATCAAGATCAAAAGCCAAAT
CTTGTAAGAATTGACTCTGAATGCATATCTTCCATCATAAATCATCACCCTCATGAGAAA
AATGATCAAAACTATGGAGTAATTAGAGGTGGAGATCAATCGTTTGGCGCGATTGAGCTA
GATTTTTCAACAAATATTGCTTATGGTACTAGTGGTGGTGATCATCATCATCATGGAGGG
GGTGTTTCTTTAACATTGGGATTACAACAACATGGTGGAAGTGGTGGATCATCAATGGGG
TTAACTACATTTTCATCACAACCATCTCATAATCAAAGTTCACTTTTTTATCCAAGAGAT
GATGATCAAGTTCAATATACATCACTTTTGGATAGTGAAAATCAGAATTTGCCATATAGA
AACTTGATGGGGGCACAACTTCTTCATGATTTGGCTGGTTAA