Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032104
CDS Infomation

pacid=37468163 polypeptide=PGSC0003DMP400021809 locus=PGSC0003DMG402012324 ID=PGSC0003DMT400032104.v4.03 annot-version=v4.03
Sequence

ATGGAGTTTCCACTTAGTACTCTCACACACATTCCTGCAATTCGCCGAGTTTTACTACTC
GCCGTGGTGATTTTAACGGCGTTCGGTAATGTTCACGGCCGGCACAAAGTACACAAATGG
GAAACCGTCGAGTACTCCGCCATAAGTTGCAGAGCACACACTGCATCGTTGACGGATTTC
GGCGGAATCGGCGACGGAACGACGTTGAATACTGACGCTTTTCGAACGGCGGTTGATCAC
CTGAGCCAGTTTCAATCGGACGGCGGTTCGATGCTGTATGTACCTGCCGGAAAATGGCTG
ACGGGGAGTTTCAATTTGACCAGCCATTTTACTCTGTATCTCGACAAAGACGCCGTTCTT
CTCGCCTCTCAGGATGAAAATGATTATCCGGTGATTGCACCGTTGCCGTCCTACGGCCGA
GGAAGGGATACAGACGGCGGTAGATTCATTAGTCTTGTTTTTGGATCCAACCTCACTGAT
GTTGTCATCACAGGTGAAAATGGAACCATTGATGGGCAAGGGCAGCTATGGTGGGACAAA
TTCCACAATGGAGAACTAAAATTTACAAGGCCTTACCTGATAGAAATCATGTACTCTGAT
AATATTCAGATCTCCAGTCTAACTTTGATTAATTCTCCTTCATGGAATGTCCATCCTGTA
TATTGCAGCAACATTATCATCCAAGGTATCACTATCCTTGCACCGGTCAGATCTCCAAAT
ACTGATGGCATTAACCCTGATTCTTGCATAAATACTAGAATAGAAGACTGTTACATTGTC
TCCGGAGACGATTGTATTGCTGTTAAGAGTGGTTGGGACGAGTATGGAATCGCCTTTGGG
ATGCCAACAAAGCAGCTAGCTATAAGGCGAATCACCTGCATTTCTCCAACCAGTGCAACA
ATTGCATTAGGCAGTGAGATGTCAGGAGGAATTCAAGATGTAAGAGCAGAGGACATTGTA
GCAATCAATACAGAATCAGCGGTTCGAATCAAGACTGCAGTAGGAAGAGGCGGATACGTG
AAGGATATATATGTTAGAGGCGTGACAATGAAAACAATGAAATACGTATTCTGGATGACG
GGAGATTATGGTTCTCATCCAGACAACAACTATGATCCCAACGCGTTACCTGTGATTGAA
AACATCAATTACCGCGATATGGTTGCTGAGAACGTGACCATTGCTGCCAAGCTTGCAGGA
ATTTCTGGTGATCCGTTTACTGGAATCTGCATATCAAATGTCACGATAGAGATGGCGCCT
AAAGCAAAGAAACTTTTCTGGAATTGTACAGATATTTCCGGGATCTCAAGTGGTGTGGTA
CCTCAGCCTTGTGATTTGTTGCCAGATCAAGGGACGGAGTACGCTTCACCCTGTAATTTT
CCAACAGAGAGCTTACCAATTGATGATATGGAAATTCAGACGTGTTCCTGCAGGAAGAAA
ATATATAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400021809
PEP Infomation

pacid=37468163 transcript=PGSC0003DMT400032104 locus=PGSC0003DMG402012324 ID=PGSC0003DMT400032104.v4.03 annot-version=v4.03
Sequence

MEFPLSTLTHIPAIRRVLLLAVVILTAFGNVHGRHKVHKWETVEYSAISCRAHTASLTDF
GGIGDGTTLNTDAFRTAVDHLSQFQSDGGSMLYVPAGKWLTGSFNLTSHFTLYLDKDAVL
LASQDENDYPVIAPLPSYGRGRDTDGGRFISLVFGSNLTDVVITGENGTIDGQGQLWWDK
FHNGELKFTRPYLIEIMYSDNIQISSLTLINSPSWNVHPVYCSNIIIQGITILAPVRSPN
TDGINPDSCINTRIEDCYIVSGDDCIAVKSGWDEYGIAFGMPTKQLAIRRITCISPTSAT
IALGSEMSGGIQDVRAEDIVAINTESAVRIKTAVGRGGYVKDIYVRGVTMKTMKYVFWMT
GDYGSHPDNNYDPNALPVIENINYRDMVAENVTIAAKLAGISGDPFTGICISNVTIEMAP
KAKKLFWNCTDISGISSGVVPQPCDLLPDQGTEYASPCNFPTESLPIDDMEIQTCSCRKK
IYN*

Transcript Sequence

Transcript ID

PGSC0003DMT400032104
Transcript Infomation

pacid=37468163 locus=PGSC0003DMG402012324 ID=PGSC0003DMT400032104.v4.03 annot-version=v4.03
Sequence

ATGGAGTTTCCACTTAGTACTCTCACACACATTCCTGCAATTCGCCGAGTTTTACTACTC
GCCGTGGTGATTTTAACGGCGTTCGGTAATGTTCACGGCCGGCACAAAGTACACAAATGG
GAAACCGTCGAGTACTCCGCCATAAGTTGCAGAGCACACACTGCATCGTTGACGGATTTC
GGCGGAATCGGCGACGGAACGACGTTGAATACTGACGCTTTTCGAACGGCGGTTGATCAC
CTGAGCCAGTTTCAATCGGACGGCGGTTCGATGCTGTATGTACCTGCCGGAAAATGGCTG
ACGGGGAGTTTCAATTTGACCAGCCATTTTACTCTGTATCTCGACAAAGACGCCGTTCTT
CTCGCCTCTCAGGATGAAAATGATTATCCGGTGATTGCACCGTTGCCGTCCTACGGCCGA
GGAAGGGATACAGACGGCGGTAGATTCATTAGTCTTGTTTTTGGATCCAACCTCACTGAT
GTTGTCATCACAGGTGAAAATGGAACCATTGATGGGCAAGGGCAGCTATGGTGGGACAAA
TTCCACAATGGAGAACTAAAATTTACAAGGCCTTACCTGATAGAAATCATGTACTCTGAT
AATATTCAGATCTCCAGTCTAACTTTGATTAATTCTCCTTCATGGAATGTCCATCCTGTA
TATTGCAGCAACATTATCATCCAAGGTATCACTATCCTTGCACCGGTCAGATCTCCAAAT
ACTGATGGCATTAACCCTGATTCTTGCATAAATACTAGAATAGAAGACTGTTACATTGTC
TCCGGAGACGATTGTATTGCTGTTAAGAGTGGTTGGGACGAGTATGGAATCGCCTTTGGG
ATGCCAACAAAGCAGCTAGCTATAAGGCGAATCACCTGCATTTCTCCAACCAGTGCAACA
ATTGCATTAGGCAGTGAGATGTCAGGAGGAATTCAAGATGTAAGAGCAGAGGACATTGTA
GCAATCAATACAGAATCAGCGGTTCGAATCAAGACTGCAGTAGGAAGAGGCGGATACGTG
AAGGATATATATGTTAGAGGCGTGACAATGAAAACAATGAAATACGTATTCTGGATGACG
GGAGATTATGGTTCTCATCCAGACAACAACTATGATCCCAACGCGTTACCTGTGATTGAA
AACATCAATTACCGCGATATGGTTGCTGAGAACGTGACCATTGCTGCCAAGCTTGCAGGA
ATTTCTGGTGATCCGTTTACTGGAATCTGCATATCAAATGTCACGATAGAGATGGCGCCT
AAAGCAAAGAAACTTTTCTGGAATTGTACAGATATTTCCGGGATCTCAAGTGGTGTGGTA
CCTCAGCCTTGTGATTTGTTGCCAGATCAAGGGACGGAGTACGCTTCACCCTGTAATTTT
CCAACAGAGAGCTTACCAATTGATGATATGGAAATTCAGACGTGTTCCTGCAGGAAGAAA
ATATATAACTAA