Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032084
CDS Infomation

pacid=37468908 polypeptide=PGSC0003DMP400021791 locus=PGSC0003DMG400012313 ID=PGSC0003DMT400032084.v4.03 annot-version=v4.03
Sequence

ATGAAAAGTGGAGAAGGGACAGCAGAAAAGCAAGAAAATTTAGGGGAAAAGTTGAAGAAA
ATAGGGAAAAGAGGGGGACACACTACACCAGTAATACCCTTTTTGAGGCTCCAACATAAT
CATCAAGAAAGTGTTGTTTGTGTTGTTCAAGAAAGTCATATTAAAGAAACCCCTTTTCAG
AATTCTTGTGTTTCTGCTAGAAAACTTGCTGCAATTCTTTGGGAGCTTCATCAATACAAG
ATACCTTTTTCTGAAATGCATCATGTTAATAGTAATAATGTTCCATCTTCAAGAATTCGC
CGTCTTCAGCCTTATCGCCACCATAGACACCACCTTTATGAGGATAGTAGGGTTCTTGAA
CATCCTGATCCTTCACCAAGTTCACCTGACCTGCCAGGAAGTGCGGGCAGTTTGAGGCGG
CATGTTGCTGCATCGTTGATGCAACATCATCGATCGATTGAAAGGACTAATCATGCGATT
CAACCTGTATCTCCTGCAAGCTATGGCAGTTCAATGGAGATTGCACCTTACAATGCTGCA
GTTACACCGTCTAGTTCTATAGACTTGAAAGGGAGGATTGGAGAGACAAGCTACAGCCTC
AAAACATCTACAGAACTTCTAAAAGTACTGAATAGAATCTGGGGCCTGGAAGAGCAGCAT
GCGTCCAATATGTCACTCGTGAAAGCATTAAAGAAAGAACTAGATCATGCTCGTGTGCGG
ATCAAGGAGCTGGTGCGAGATCAGCAAGTGGATAGACATGAAATAGATGAATTGATGAAG
CAGATAACAGAGGATAAAGTGGTAAGGAAAAGTAAGGAGCAAGATCGAATTAGTGCTGCG
GTTCAGTCTGTCAGAGATGAACTGGAAGATGAAAGAAAGCTAAGAAAACGCTCAGAGAGC
TTGCATCGGAGACTGGCTAGGGAGCTGTATGAGGTGAAAACATCTCTTGCCAATGCTTCG
AAAGAGTGGGACAAAGAGAAAAAGTCTCGACAACTTCTAGAAGACCTTTGTGATGAGTTT
GCTTGGGGAATAAGACATTATGAACAGGAGTTGCATTCTGTAAGACATAAATCTGACAAG
GATTGGACCGAAAGGACTAATAGTGATCAACTAATTCTGCACATTTCCGAAGCATGGATT
GATGAACGGATGCAGACAAACATGGAACCTCAATATGGTCAAGGTGATAAAAGTTCAATC
ATAGAAAAATTCAGGTCTGAAATAGAGACATTTATTAAAACTAAACAAACCGGTATCAAG
AATAATGTTAACTTAGGGGATCCCACCTACCGACGAGGTTCTCTGGATTCCATCCCTCTT
AATGTTGCTGGCAGCGCTCCGCAAGATGAGGGCGATGACGAAGATTCTGTTAGCAGTGAC
TCACATTGTTTTGAGCTGCAAAAACCAAGTGCTTCTGACTTGAGACCCCGCGAGAATGGT
GCCAAGGAAAAGAGTGCTGAAGAAACAATGAGGCCTAATTACATATTGAGGAAACCTGCA
TTACACGAAAGGTCAAAGAGTAGCAGCATGTCCAATTTACAGGTGAAGTTTGAAGAACAG
ATGAACCGGGCTGCATTACCAAGTGAAAGCAGGAACGAGTTTGACGATAATGATCTGGGA
GAAACTAGTGAAAAGAACCAAGTTGAAATAAGCACTTCTAACAAGTTCGAGATATGTGAA
GTAACAGAAGAAGGTAGTTCTGGGAAAAAGAACAAAGCTGATGGAACTCCTGGAGTTAAC
TCAAACTATATGATTGATGAATTAATTAGAAGCCATTATTTATTGTCAGATAGTGGAAAC
ATGCCACCTGAAAATGATTATGAGTTAGCTTCTTATGGTACTTCTGTTAGAAGGGCTCAA
GCTAGTCCGGTCAGGCAATGGACGGAGAAGCTTCCCTCACATGAGAACATATCCGAGTCA
TCAACTAAATTGCCACCAGATTTGAAGGAGAACACTTTGAAGGCCAAGTTAATGGAAGCA
AGAACAAGGGGTCAACGTTCACGATCACGATTGAAAGGTACCAAGATCTCCCTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400021791
PEP Infomation

pacid=37468908 transcript=PGSC0003DMT400032084 locus=PGSC0003DMG400012313 ID=PGSC0003DMT400032084.v4.03 annot-version=v4.03
Sequence

MKSGEGTAEKQENLGEKLKKIGKRGGHTTPVIPFLRLQHNHQESVVCVVQESHIKETPFQ
NSCVSARKLAAILWELHQYKIPFSEMHHVNSNNVPSSRIRRLQPYRHHRHHLYEDSRVLE
HPDPSPSSPDLPGSAGSLRRHVAASLMQHHRSIERTNHAIQPVSPASYGSSMEIAPYNAA
VTPSSSIDLKGRIGETSYSLKTSTELLKVLNRIWGLEEQHASNMSLVKALKKELDHARVR
IKELVRDQQVDRHEIDELMKQITEDKVVRKSKEQDRISAAVQSVRDELEDERKLRKRSES
LHRRLARELYEVKTSLANASKEWDKEKKSRQLLEDLCDEFAWGIRHYEQELHSVRHKSDK
DWTERTNSDQLILHISEAWIDERMQTNMEPQYGQGDKSSIIEKFRSEIETFIKTKQTGIK
NNVNLGDPTYRRGSLDSIPLNVAGSAPQDEGDDEDSVSSDSHCFELQKPSASDLRPRENG
AKEKSAEETMRPNYILRKPALHERSKSSSMSNLQVKFEEQMNRAALPSESRNEFDDNDLG
ETSEKNQVEISTSNKFEICEVTEEGSSGKKNKADGTPGVNSNYMIDELIRSHYLLSDSGN
MPPENDYELASYGTSVRRAQASPVRQWTEKLPSHENISESSTKLPPDLKENTLKAKLMEA
RTRGQRSRSRLKGTKISL*

Transcript Sequence

Transcript ID

PGSC0003DMT400032084
Transcript Infomation

pacid=37468908 locus=PGSC0003DMG400012313 ID=PGSC0003DMT400032084.v4.03 annot-version=v4.03
Sequence

ATGAAAAGTGGAGAAGGGACAGCAGAAAAGCAAGAAAATTTAGGGGAAAAGTTGAAGAAA
ATAGGGAAAAGAGGGGGACACACTACACCAGTAATACCCTTTTTGAGGCTCCAACATAAT
CATCAAGAAAGTGTTGTTTGTGTTGTTCAAGAAAGTCATATTAAAGAAACCCCTTTTCAG
AATTCTTGTGTTTCTGCTAGAAAACTTGCTGCAATTCTTTGGGAGCTTCATCAATACAAG
ATACCTTTTTCTGAAATGCATCATGTTAATAGTAATAATGTTCCATCTTCAAGAATTCGC
CGTCTTCAGCCTTATCGCCACCATAGACACCACCTTTATGAGGATAGTAGGGTTCTTGAA
CATCCTGATCCTTCACCAAGTTCACCTGACCTGCCAGGAAGTGCGGGCAGTTTGAGGCGG
CATGTTGCTGCATCGTTGATGCAACATCATCGATCGATTGAAAGGACTAATCATGCGATT
CAACCTGTATCTCCTGCAAGCTATGGCAGTTCAATGGAGATTGCACCTTACAATGCTGCA
GTTACACCGTCTAGTTCTATAGACTTGAAAGGGAGGATTGGAGAGACAAGCTACAGCCTC
AAAACATCTACAGAACTTCTAAAAGTACTGAATAGAATCTGGGGCCTGGAAGAGCAGCAT
GCGTCCAATATGTCACTCGTGAAAGCATTAAAGAAAGAACTAGATCATGCTCGTGTGCGG
ATCAAGGAGCTGGTGCGAGATCAGCAAGTGGATAGACATGAAATAGATGAATTGATGAAG
CAGATAACAGAGGATAAAGTGGTAAGGAAAAGTAAGGAGCAAGATCGAATTAGTGCTGCG
GTTCAGTCTGTCAGAGATGAACTGGAAGATGAAAGAAAGCTAAGAAAACGCTCAGAGAGC
TTGCATCGGAGACTGGCTAGGGAGCTGTATGAGGTGAAAACATCTCTTGCCAATGCTTCG
AAAGAGTGGGACAAAGAGAAAAAGTCTCGACAACTTCTAGAAGACCTTTGTGATGAGTTT
GCTTGGGGAATAAGACATTATGAACAGGAGTTGCATTCTGTAAGACATAAATCTGACAAG
GATTGGACCGAAAGGACTAATAGTGATCAACTAATTCTGCACATTTCCGAAGCATGGATT
GATGAACGGATGCAGACAAACATGGAACCTCAATATGGTCAAGGTGATAAAAGTTCAATC
ATAGAAAAATTCAGGTCTGAAATAGAGACATTTATTAAAACTAAACAAACCGGTATCAAG
AATAATGTTAACTTAGGGGATCCCACCTACCGACGAGGTTCTCTGGATTCCATCCCTCTT
AATGTTGCTGGCAGCGCTCCGCAAGATGAGGGCGATGACGAAGATTCTGTTAGCAGTGAC
TCACATTGTTTTGAGCTGCAAAAACCAAGTGCTTCTGACTTGAGACCCCGCGAGAATGGT
GCCAAGGAAAAGAGTGCTGAAGAAACAATGAGGCCTAATTACATATTGAGGAAACCTGCA
TTACACGAAAGGTCAAAGAGTAGCAGCATGTCCAATTTACAGGTGAAGTTTGAAGAACAG
ATGAACCGGGCTGCATTACCAAGTGAAAGCAGGAACGAGTTTGACGATAATGATCTGGGA
GAAACTAGTGAAAAGAACCAAGTTGAAATAAGCACTTCTAACAAGTTCGAGATATGTGAA
GTAACAGAAGAAGGTAGTTCTGGGAAAAAGAACAAAGCTGATGGAACTCCTGGAGTTAAC
TCAAACTATATGATTGATGAATTAATTAGAAGCCATTATTTATTGTCAGATAGTGGAAAC
ATGCCACCTGAAAATGATTATGAGTTAGCTTCTTATGGTACTTCTGTTAGAAGGGCTCAA
GCTAGTCCGGTCAGGCAATGGACGGAGAAGCTTCCCTCACATGAGAACATATCCGAGTCA
TCAACTAAATTGCCACCAGATTTGAAGGAGAACACTTTGAAGGCCAAGTTAATGGAAGCA
AGAACAAGGGGTCAACGTTCACGATCACGATTGAAAGGTACCAAGATCTCCCTCTAG