Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400032061
CDS Infomation

pacid=37467936 polypeptide=PGSC0003DMP400021777 locus=PGSC0003DMG400012307 ID=PGSC0003DMT400032061.v4.03 annot-version=v4.03
Sequence

ATGGTTAAAGTTTTGAGCTTTAGGGAGTGGTGGGGGATTGTTTCTTTGGGTTTCTTGGTG
GGATTGTTTCTGTTGTCACAAGGCACTGTTGCTCTTCTTGAAAATGATAAGCAAGCATTG
TTGGATTTTGTTAATCAGTTGCCTCATTTGCACCCTTTGAACTGGGATGCAAATTCTTCA
GTTTGCAAGAACTGGACTGGAGTGGGGTGTAATGAAGATGGTTCTAGAGTGATAGCACTG
AGGTTACCTGGGGTTGGGTTCAATGGTCCAATTCCTAATAATACACTGAGTCGTTTGACT
GCATTGCAGATCTTGAGCCTTAGATCTAATGGTATCAATGGCACTTTCCCTATGGACTTT
GATAACCTCAAAAATTTGTCTTATCTTTACCTTCATTACAACAATTTCTCAGGTCCTCTG
CCTTTTGATTTCTCTGTTTGGCAAAATCTCACCAGTTTGAACTTGTCAAACAACAGATTC
AATGGCACCATTCCTAGCTCGATATCGGGTTTAAGTCATCTTACTGCCCTTAATCTTGCT
AACAACTCACTTTCTGGTTCAATTCCTGATCTGCATTTGCCCAACTTGCAGCTACTGAAT
TTGTCAAACAATAACCTTATAGGTACTGTGCCTAAATCACTTCAAAAATTCCCAAAGAAT
GTGTTCATTGGTAATAATATGTCTTTACTTGACTATCCTGTTTCGAATTCTTCTATTGTT
TCCCTGCCTCAGCAACCAAATCCAAAATTCAAGAATGATGGTAAATTGAGTGAGAGGGCT
TTGCTTGGGATTATAGTAGCTAGTAGTGTAATTGGGATTCTTGGATTTGGTTTCTTGATG
GTTGTTTGTTGTTTTAGAAGAAAGAAAGATGATGGTTCGTTTCCCAGCAAGATGGAGAAG
GGAGATATGTCTCCTGATAAGGCGATTTCAAGGAGTCAAGATGCTAATAATAGATTGGTT
TTCTTTGAGGGTTGTAACTATGCATTTGATTTAGAAGATTTGCTTAGAGCTTCCGCGGAG
GTATTGGGGAAGGGCACGTTTGGTATGGCGTATAAAGCAATATTAGAAGATGCTACCACA
GTGGTAGTGAAGAGGTTGAAAGATGTAGGTGCTGGGAAGAAGGAGTTTGAGCAGCAAATG
GAGGTTGTGGGAAGTATAAAACATGAAAATGTAGTCGAGCTTCGAGCATATTACTATTCA
AAAGACGAAAAGCTTACTGTCTCTGACTATTTCAGTGAGGGTAGTGTTGCTGCAATGCTC
CATGGTAAACGGGGAGAAAACAGGATCCCTTTAGACTGGGAAACTCGACTTCGGATAGCA
ACTGGAGCAGCGAGAGGTATTGCTAGGATACATGCTGAGAATGGTGGCAAGCTAGTCCAC
GGAAACGTCAAATCCTCAAATATCTTTCTGAACTCTAAACAATACGGTTGTGTATCTGAT
GTTGGTCTGTCAACAATAATGAGTTCGTTAGCTCATCCAGTTGCACGTGCTGCTGGTTTT
CGCGCTCCAGAAGTAACAGACACACGTAAAGCCACTCAACCTTCTGATGTGTACAGCTTT
GGTGTGTTGTTATTAGAGCTCTTGACAGGCAAGTCCCCCATCCATACAACAAACGGAGAT
GAGGTCATACACTTAGTCCGATGGGTTCATTCAGTTGTCCGAGAGGAGTGGACTGCTGAA
GTATTCGACTTGCAACTATTGAGGTACCCGAACATAGAGGAAGAGATGGTGGAAATGTTA
CAGATAGCAATGTCTTGTGTGGTAAGGATGTCAGATCAAAGACCAAAAATGTTTGAGGTT
GTTAAAATGATCGAGAACGTTCGTCCCACGAGCTTAGAGAATGAGCATTCATCTGAAGGA
AAAGCAGAAACTTCAACACCAAGAGCAGAAGCTACACCTGTGCCTGATACACAATCTGAT
TCTCAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400021777
PEP Infomation

pacid=37467936 transcript=PGSC0003DMT400032061 locus=PGSC0003DMG400012307 ID=PGSC0003DMT400032061.v4.03 annot-version=v4.03
Sequence

MVKVLSFREWWGIVSLGFLVGLFLLSQGTVALLENDKQALLDFVNQLPHLHPLNWDANSS
VCKNWTGVGCNEDGSRVIALRLPGVGFNGPIPNNTLSRLTALQILSLRSNGINGTFPMDF
DNLKNLSYLYLHYNNFSGPLPFDFSVWQNLTSLNLSNNRFNGTIPSSISGLSHLTALNLA
NNSLSGSIPDLHLPNLQLLNLSNNNLIGTVPKSLQKFPKNVFIGNNMSLLDYPVSNSSIV
SLPQQPNPKFKNDGKLSERALLGIIVASSVIGILGFGFLMVVCCFRRKKDDGSFPSKMEK
GDMSPDKAISRSQDANNRLVFFEGCNYAFDLEDLLRASAEVLGKGTFGMAYKAILEDATT
VVVKRLKDVGAGKKEFEQQMEVVGSIKHENVVELRAYYYSKDEKLTVSDYFSEGSVAAML
HGKRGENRIPLDWETRLRIATGAARGIARIHAENGGKLVHGNVKSSNIFLNSKQYGCVSD
VGLSTIMSSLAHPVARAAGFRAPEVTDTRKATQPSDVYSFGVLLLELLTGKSPIHTTNGD
EVIHLVRWVHSVVREEWTAEVFDLQLLRYPNIEEEMVEMLQIAMSCVVRMSDQRPKMFEV
VKMIENVRPTSLENEHSSEGKAETSTPRAEATPVPDTQSDSQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400032061
Transcript Infomation

pacid=37467936 locus=PGSC0003DMG400012307 ID=PGSC0003DMT400032061.v4.03 annot-version=v4.03
Sequence

ATGGTTAAAGTTTTGAGCTTTAGGGAGTGGTGGGGGATTGTTTCTTTGGGTTTCTTGGTG
GGATTGTTTCTGTTGTCACAAGGCACTGTTGCTCTTCTTGAAAATGATAAGCAAGCATTG
TTGGATTTTGTTAATCAGTTGCCTCATTTGCACCCTTTGAACTGGGATGCAAATTCTTCA
GTTTGCAAGAACTGGACTGGAGTGGGGTGTAATGAAGATGGTTCTAGAGTGATAGCACTG
AGGTTACCTGGGGTTGGGTTCAATGGTCCAATTCCTAATAATACACTGAGTCGTTTGACT
GCATTGCAGATCTTGAGCCTTAGATCTAATGGTATCAATGGCACTTTCCCTATGGACTTT
GATAACCTCAAAAATTTGTCTTATCTTTACCTTCATTACAACAATTTCTCAGGTCCTCTG
CCTTTTGATTTCTCTGTTTGGCAAAATCTCACCAGTTTGAACTTGTCAAACAACAGATTC
AATGGCACCATTCCTAGCTCGATATCGGGTTTAAGTCATCTTACTGCCCTTAATCTTGCT
AACAACTCACTTTCTGGTTCAATTCCTGATCTGCATTTGCCCAACTTGCAGCTACTGAAT
TTGTCAAACAATAACCTTATAGGTACTGTGCCTAAATCACTTCAAAAATTCCCAAAGAAT
GTGTTCATTGGTAATAATATGTCTTTACTTGACTATCCTGTTTCGAATTCTTCTATTGTT
TCCCTGCCTCAGCAACCAAATCCAAAATTCAAGAATGATGGTAAATTGAGTGAGAGGGCT
TTGCTTGGGATTATAGTAGCTAGTAGTGTAATTGGGATTCTTGGATTTGGTTTCTTGATG
GTTGTTTGTTGTTTTAGAAGAAAGAAAGATGATGGTTCGTTTCCCAGCAAGATGGAGAAG
GGAGATATGTCTCCTGATAAGGCGATTTCAAGGAGTCAAGATGCTAATAATAGATTGGTT
TTCTTTGAGGGTTGTAACTATGCATTTGATTTAGAAGATTTGCTTAGAGCTTCCGCGGAG
GTATTGGGGAAGGGCACGTTTGGTATGGCGTATAAAGCAATATTAGAAGATGCTACCACA
GTGGTAGTGAAGAGGTTGAAAGATGTAGGTGCTGGGAAGAAGGAGTTTGAGCAGCAAATG
GAGGTTGTGGGAAGTATAAAACATGAAAATGTAGTCGAGCTTCGAGCATATTACTATTCA
AAAGACGAAAAGCTTACTGTCTCTGACTATTTCAGTGAGGGTAGTGTTGCTGCAATGCTC
CATGGTAAACGGGGAGAAAACAGGATCCCTTTAGACTGGGAAACTCGACTTCGGATAGCA
ACTGGAGCAGCGAGAGGTATTGCTAGGATACATGCTGAGAATGGTGGCAAGCTAGTCCAC
GGAAACGTCAAATCCTCAAATATCTTTCTGAACTCTAAACAATACGGTTGTGTATCTGAT
GTTGGTCTGTCAACAATAATGAGTTCGTTAGCTCATCCAGTTGCACGTGCTGCTGGTTTT
CGCGCTCCAGAAGTAACAGACACACGTAAAGCCACTCAACCTTCTGATGTGTACAGCTTT
GGTGTGTTGTTATTAGAGCTCTTGACAGGCAAGTCCCCCATCCATACAACAAACGGAGAT
GAGGTCATACACTTAGTCCGATGGGTTCATTCAGTTGTCCGAGAGGAGTGGACTGCTGAA
GTATTCGACTTGCAACTATTGAGGTACCCGAACATAGAGGAAGAGATGGTGGAAATGTTA
CAGATAGCAATGTCTTGTGTGGTAAGGATGTCAGATCAAAGACCAAAAATGTTTGAGGTT
GTTAAAATGATCGAGAACGTTCGTCCCACGAGCTTAGAGAATGAGCATTCATCTGAAGGA
AAAGCAGAAACTTCAACACCAAGAGCAGAAGCTACACCTGTGCCTGATACACAATCTGAT
TCTCAATGA